RNA–Protein interactions for RNA: ENST00000393860.7

RAB5C-202, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-202ENST00000393860 MYL7Q01449 175 aa21.44■■□□□ 1.02
RAB5C-202ENST00000393860 SNRNP35Q16560 246 aaKnown RBP21.44■■□□□ 1.02
RAB5C-202ENST00000393860 INTS8Q75QN2 995 aaKnown RBP21.44■■□□□ 1.02
RAB5C-202ENST00000393860 RHPN2Q8IUC4 686 aa21.44■■□□□ 1.02
RAB5C-202ENST00000393860 MSL3Q8N5Y2 521 aaKnown RBP21.44■■□□□ 1.02
RAB5C-202ENST00000393860 PPP1R13LQ8WUF5 828 aa21.44■■□□□ 1.02
RAB5C-202ENST00000393860 NHEJ1Q9H9Q4 299 aaPredicted RBP21.44■■□□□ 1.02
RAB5C-202ENST00000393860 SIX2Q9NPC8 291 aa21.44■■□□□ 1.02
RAB5C-202ENST00000393860 SUCLA2Q9P2R7 463 aaPredicted RBP21.44■■□□□ 1.02
RAB5C-202ENST00000393860 GJD2Q9UKL4 321 aa21.44■■□□□ 1.02
RAB5C-202ENST00000393860 PPME1Q9Y570 386 aa21.44■■□□□ 1.02
RAB5C-202ENST00000393860 FHOD1Q9Y613 1164 aa21.44■■□□□ 1.02
RAB5C-202ENST00000393860 EPN1Q9Y6I3 576 aaPredicted RBP21.44■■□□□ 1.02
RAB5C-202ENST00000393860 IGKV6-21A0A0C4DH24 114 aa21.43■■□□□ 1.02
RAB5C-202ENST00000393860 DYNC1LI2O43237 492 aaPredicted RBP21.43■■□□□ 1.02
RAB5C-202ENST00000393860 NDUFA10O95299 355 aa21.43■■□□□ 1.02
RAB5C-202ENST00000393860 HOXC6P09630 235 aa21.43■■□□□ 1.02
RAB5C-202ENST00000393860 RGS2P41220 211 aa21.43■■□□□ 1.02
RAB5C-202ENST00000393860 BRDTQ58F21 947 aaPredicted RBP21.43■■□□□ 1.02
RAB5C-202ENST00000393860 C1orf220Q5T0J3 134 aa21.43■■□□□ 1.02
RAB5C-202ENST00000393860 OLFML2BQ68BL8 750 aa21.43■■□□□ 1.02
RAB5C-202ENST00000393860 EFCAB12Q6NXP0 572 aa21.43■■□□□ 1.02
RAB5C-202ENST00000393860 TMEM174Q8WUU8 243 aa21.43■■□□□ 1.02
RAB5C-202ENST00000393860 TCP11Q8WWU5 503 aa21.43■■□□□ 1.02
RAB5C-202ENST00000393860 PSPC1Q8WXF1 523 aaKnown RBP21.43■■□□□ 1.02
RAB5C-202ENST00000393860 ZBTB45Q96K62 511 aaPredicted RBP21.43■■□□□ 1.02
RAB5C-202ENST00000393860 TARS2Q9BW92 718 aaKnown RBP21.43■■□□□ 1.02
RAB5C-202ENST00000393860 LZTFL1Q9NQ48 299 aa21.43■■□□□ 1.02
RAB5C-202ENST00000393860 PLAGL2Q9UPG8 496 aa21.43■■□□□ 1.02
RAB5C-202ENST00000393860 MGAMO43451 1857 aa21.43■■□□□ 1.02
RAB5C-202ENST00000393860 CA12O43570 354 aa21.43■■□□□ 1.02
RAB5C-202ENST00000393860 ADCY3O60266 1144 aa21.43■■□□□ 1.02
RAB5C-202ENST00000393860 C22orf31O95567 290 aa21.43■■□□□ 1.02
RAB5C-202ENST00000393860 ZNF865P0CJ78 1059 aaPredicted RBP21.43■■□□□ 1.02
RAB5C-202ENST00000393860 GCLMP48507 274 aa21.43■■□□□ 1.02
RAB5C-202ENST00000393860 PPP3CAQ08209 521 aa21.43■■□□□ 1.02
RAB5C-202ENST00000393860 RAPGEF1Q13905 1077 aa21.43■■□□□ 1.02
RAB5C-202ENST00000393860 KLHDC7AQ5VTJ3 777 aa21.43■■□□□ 1.02
RAB5C-202ENST00000393860 RNF149Q8NC42 400 aa21.43■■□□□ 1.02
RAB5C-202ENST00000393860 CCDC127Q96BQ5 260 aa21.43■■□□□ 1.02
RAB5C-202ENST00000393860 PPP1R16BQ96T49 567 aa21.43■■□□□ 1.02
RAB5C-202ENST00000393860 APBA2Q99767 749 aa21.43■■□□□ 1.02
RAB5C-202ENST00000393860 FAM213AQ9BRX8 229 aa21.43■■□□□ 1.02
RAB5C-202ENST00000393860 EDEM3Q9BZQ6 932 aa21.43■■□□□ 1.02
RAB5C-202ENST00000393860 ARHGAP20Q9P2F6 1191 aa21.43■■□□□ 1.02
RAB5C-202ENST00000393860 KCNG1Q9UIX4 513 aa21.43■■□□□ 1.02
RAB5C-202ENST00000393860 REXO2Q9Y3B8 237 aaKnown RBP21.43■■□□□ 1.02
RAB5C-202ENST00000393860 EVPLQ92817 2033 aa21.42■■□□□ 1.02
RAB5C-202ENST00000393860 TTLL13PA6NNM8 815 aa21.42■■□□□ 1.02
RAB5C-202ENST00000393860 NLRP4Q96MN2 994 aa21.42■■□□□ 1.02
RAB5C-202ENST00000393860 HAPLN2Q9GZV7 340 aa21.42■■□□□ 1.02
RAB5C-202ENST00000393860 ANKFY1Q9P2R3 1169 aa21.42■■□□□ 1.02
RAB5C-202ENST00000393860 PHLPP2Q6ZVD8 1323 aa21.41■■□□□ 1.02
RAB5C-202ENST00000393860 H3BRB1 525 aa21.41■■□□□ 1.02
RAB5C-202ENST00000393860 PPFIA4O75335 1185 aa21.41■■□□□ 1.02
RAB5C-202ENST00000393860 UCHL3P15374 230 aa21.41■■□□□ 1.02
RAB5C-202ENST00000393860 HNRNPH3P31942 346 aaKnown RBP21.41■■□□□ 1.02
RAB5C-202ENST00000393860 MATR3P43243 847 aaKnown RBP eCLIP21.41■■□□□ 1.02
RAB5C-202ENST00000393860 ARID5AQ03989 594 aa21.41■■□□□ 1.02
RAB5C-202ENST00000393860 ENOX2Q16206 610 aaKnown RBP21.41■■□□□ 1.02
RAB5C-202ENST00000393860 TRIM65Q6PJ69 517 aa21.41■■□□□ 1.02
RAB5C-202ENST00000393860 SYT10Q6XYQ8 523 aa21.41■■□□□ 1.02
RAB5C-202ENST00000393860 GPD1LQ8N335 351 aa21.41■■□□□ 1.02
RAB5C-202ENST00000393860 POP1Q99575 1024 aaKnown RBP21.41■■□□□ 1.02
RAB5C-202ENST00000393860 INTS2Q9H0H0 1204 aaKnown RBP21.41■■□□□ 1.02
RAB5C-202ENST00000393860 TUT1Q9H6E5 874 aaKnown RBP21.41■■□□□ 1.02
RAB5C-202ENST00000393860 PLCB1Q9NQ66 1216 aa21.41■■□□□ 1.02
RAB5C-202ENST00000393860 TOPORSQ9NS56 1045 aaPredicted RBP21.41■■□□□ 1.02
RAB5C-202ENST00000393860 TFR2Q9UP52 801 aa21.41■■□□□ 1.02
RAB5C-202ENST00000393860 GTPBP10A4D1E9 387 aaKnown RBP21.41■■□□□ 1.02
RAB5C-202ENST00000393860 GAS2O43903 313 aaKnown RBP21.41■■□□□ 1.02
RAB5C-202ENST00000393860 HARSP12081 509 aaKnown RBP21.41■■□□□ 1.02
RAB5C-202ENST00000393860 KLRC1P26715 233 aa21.41■■□□□ 1.02
RAB5C-202ENST00000393860 ZNF484Q5JVG2 852 aa21.41■■□□□ 1.02
RAB5C-202ENST00000393860 SFMBT2Q5VUG0 894 aa21.41■■□□□ 1.02
RAB5C-202ENST00000393860 SOCS4Q8WXH5 440 aa21.41■■□□□ 1.02
RAB5C-202ENST00000393860 HHIPL1Q96JK4 782 aa21.41■■□□□ 1.02
RAB5C-202ENST00000393860 FAM84AQ96KN4 292 aa21.41■■□□□ 1.02
RAB5C-202ENST00000393860 ZNF215Q9UL58 517 aaPredicted RBP21.41■■□□□ 1.02
RAB5C-202ENST00000393860 LRRN2O75325 713 aa21.4■■□□□ 1.02
RAB5C-202ENST00000393860 TOMM70O94826 608 aa21.4■■□□□ 1.02
RAB5C-202ENST00000393860 ABL1P00519 1130 aa21.4■■□□□ 1.02
RAB5C-202ENST00000393860 GARTP22102 1010 aa21.4■■□□□ 1.02
RAB5C-202ENST00000393860 ABCD1P33897 745 aa21.4■■□□□ 1.02
RAB5C-202ENST00000393860 EIF4A3P38919 411 aaKnown RBP21.4■■□□□ 1.02
RAB5C-202ENST00000393860 DGKDQ16760 1214 aa21.4■■□□□ 1.02
RAB5C-202ENST00000393860 IQCEQ6IPM2 695 aa21.4■■□□□ 1.02
RAB5C-202ENST00000393860 TLK2Q86UE8 772 aa21.4■■□□□ 1.02
RAB5C-202ENST00000393860 TMEM134Q9H6X4 195 aa21.4■■□□□ 1.02
RAB5C-202ENST00000393860 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.4■■□□□ 1.028e-7■■■■■ 104
RAB5C-202ENST00000393860 GNEQ9Y223 722 aaKnown RBP21.4■■□□□ 1.02
RAB5C-202ENST00000393860 LRRIQ3A6PVS8 624 aaPredicted RBP21.39■■□□□ 1.02
RAB5C-202ENST00000393860 MAPK13O15264 365 aa21.39■■□□□ 1.02
RAB5C-202ENST00000393860 NLRP11P59045 1033 aaKnown RBP21.39■■□□□ 1.02
RAB5C-202ENST00000393860 MXD4Q14582 209 aaPredicted RBP21.39■■□□□ 1.02
RAB5C-202ENST00000393860 TDRD12Q587J7 1177 aaKnown RBP21.39■■□□□ 1.02
RAB5C-202ENST00000393860 EXOC8Q8IYI6 725 aa21.39■■□□□ 1.02
RAB5C-202ENST00000393860 JPH2Q9BR39 696 aaPredicted RBP21.39■■□□□ 1.02
RAB5C-202ENST00000393860 GABRQQ9UN88 632 aa21.39■■□□□ 1.02
RAB5C-202ENST00000393860 TBC1D8O95759 1140 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms