RNA–Protein interactions for RNA: ENST00000393104.6

PDCD4-202, Transcript of programmed cell death 4, humanhuman

TSL 1 (best) BASIC

Gene PDCD4, Length 3,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-202ENST00000393104 H2AFZP0C0S5 128 aa12.33□□□□□ -0.44
PDCD4-202ENST00000393104 ANXA13P27216 316 aa12.33□□□□□ -0.44
PDCD4-202ENST00000393104 FOXN2P32314 431 aa12.33□□□□□ -0.44
PDCD4-202ENST00000393104 SLCO1A2P46721 670 aa12.33□□□□□ -0.44
PDCD4-202ENST00000393104 CTTNQ14247 550 aaKnown RBP12.33□□□□□ -0.44
PDCD4-202ENST00000393104 LRRC14Q15048 493 aa12.33□□□□□ -0.44
PDCD4-202ENST00000393104 ODF2Q5BJF6 829 aa12.33□□□□□ -0.44
PDCD4-202ENST00000393104 HERC4Q5GLZ8 1057 aaPredicted RBP12.33□□□□□ -0.44
PDCD4-202ENST00000393104 SOGA3Q5TF21 947 aa12.33□□□□□ -0.44
PDCD4-202ENST00000393104 H2AFVQ71UI9 128 aa12.33□□□□□ -0.44
PDCD4-202ENST00000393104 U2AF1L4Q8WU68 220 aaKnown RBP12.33□□□□□ -0.44
PDCD4-202ENST00000393104 TAF4BQ92750 862 aa12.33□□□□□ -0.44
PDCD4-202ENST00000393104 USP40Q9NVE5 1235 aa12.33□□□□□ -0.44
PDCD4-202ENST00000393104 DICER1Q9UPY3 1922 aaKnown RBP12.33□□□□□ -0.44
PDCD4-202ENST00000393104 CLGNO14967 610 aa12.32□□□□□ -0.44
PDCD4-202ENST00000393104 AGTP01019 485 aa12.32□□□□□ -0.44
PDCD4-202ENST00000393104 PLCG2P16885 1265 aa12.32□□□□□ -0.44
PDCD4-202ENST00000393104 CHKAP35790 457 aa12.32□□□□□ -0.44
PDCD4-202ENST00000393104 ADCY7P51828 1080 aa12.32□□□□□ -0.44
PDCD4-202ENST00000393104 RNASELQ05823 741 aaKnown RBP12.32□□□□□ -0.44
PDCD4-202ENST00000393104 BLMHQ13867 455 aa12.32□□□□□ -0.44
PDCD4-202ENST00000393104 MAEAQ7L5Y9 396 aa12.32□□□□□ -0.44
PDCD4-202ENST00000393104 PODNQ7Z5L7 613 aa12.32□□□□□ -0.44
PDCD4-202ENST00000393104 ECHDC2Q86YB7 292 aa12.32□□□□□ -0.44
PDCD4-202ENST00000393104 UHMK1Q8TAS1 419 aaKnown RBP12.32□□□□□ -0.44
PDCD4-202ENST00000393104 NEK9Q8TD19 979 aa12.32□□□□□ -0.44
PDCD4-202ENST00000393104 SLC20A1Q8WUM9 679 aa12.32□□□□□ -0.44
PDCD4-202ENST00000393104 RFFLQ8WZ73 363 aa12.32□□□□□ -0.44
PDCD4-202ENST00000393104 UTP11Q9Y3A2 253 aaKnown RBP12.32□□□□□ -0.44
PDCD4-202ENST00000393104 GTPBP10A4D1E9 387 aaKnown RBP12.32□□□□□ -0.44
PDCD4-202ENST00000393104 MEIS2O14770 477 aa12.32□□□□□ -0.44
PDCD4-202ENST00000393104 DIAPH2O60879 1101 aa12.32□□□□□ -0.44
PDCD4-202ENST00000393104 NPM3O75607 178 aaKnown RBP12.32□□□□□ -0.44
PDCD4-202ENST00000393104 GCAP28676 217 aa12.32□□□□□ -0.44
PDCD4-202ENST00000393104 CDR1P51861 262 aa12.32□□□□□ -0.44
PDCD4-202ENST00000393104 C1orf220Q5T0J3 134 aa12.32□□□□□ -0.44
PDCD4-202ENST00000393104 PHC3Q8NDX5 983 aa12.32□□□□□ -0.44
PDCD4-202ENST00000393104 TRIM6Q9C030 488 aaPredicted RBP12.32□□□□□ -0.44
PDCD4-202ENST00000393104 ECT2Q9H8V3 914 aa12.32□□□□□ -0.44
PDCD4-202ENST00000393104 SIGLEC16A6NMB1 481 aa12.32□□□□□ -0.44
PDCD4-202ENST00000393104 NEBLO76041 1014 aa12.32□□□□□ -0.44
PDCD4-202ENST00000393104 PYGMP11217 842 aa12.32□□□□□ -0.44
PDCD4-202ENST00000393104 IFNAR2P48551 515 aa12.32□□□□□ -0.44
PDCD4-202ENST00000393104 PPP4R3CPQ6ZMV5 832 aa12.32□□□□□ -0.44
PDCD4-202ENST00000393104 PCDHB18PQ96TA0 734 aa12.32□□□□□ -0.44
PDCD4-202ENST00000393104 GCNT4Q9P109 453 aa12.32□□□□□ -0.44
PDCD4-202ENST00000393104 SWAP70Q9UH65 585 aa12.32□□□□□ -0.44
PDCD4-202ENST00000393104 PCDHA12Q9UN75 941 aa12.32□□□□□ -0.44
PDCD4-202ENST00000393104 MEIS1O00470 390 aa12.31□□□□□ -0.44
PDCD4-202ENST00000393104 PDXKO00764 312 aa12.31□□□□□ -0.44
PDCD4-202ENST00000393104 SOX5P35711 763 aa12.31□□□□□ -0.44
PDCD4-202ENST00000393104 CCDC142Q17RM4 750 aa12.31□□□□□ -0.44
PDCD4-202ENST00000393104 DPP8Q6V1X1 898 aaPredicted RBP12.31□□□□□ -0.44
PDCD4-202ENST00000393104 SLC30A10Q6XR72 485 aa12.31□□□□□ -0.44
PDCD4-202ENST00000393104 KSR1Q8IVT5 923 aa12.31□□□□□ -0.44
PDCD4-202ENST00000393104 SYT2Q8N9I0 419 aaPredicted RBP12.31□□□□□ -0.44
PDCD4-202ENST00000393104 SGIP1Q9BQI5 828 aa12.31□□□□□ -0.44
PDCD4-202ENST00000393104 VAV3Q9UKW4 847 aa12.31□□□□□ -0.44
PDCD4-202ENST00000393104 ALG6Q9Y672 507 aa12.31□□□□□ -0.44
PDCD4-202ENST00000393104 MYH11P35749 1972 aa12.31□□□□□ -0.44
PDCD4-202ENST00000393104 CFAP73A6NFT4 308 aa12.31□□□□□ -0.44
PDCD4-202ENST00000393104 USP17L15C9J2P7 530 aa12.31□□□□□ -0.44
PDCD4-202ENST00000393104 USP17L13C9JLJ4 530 aa12.31□□□□□ -0.44
PDCD4-202ENST00000393104 USP17L11C9JVI0 530 aa12.31□□□□□ -0.44
PDCD4-202ENST00000393104 USP17L18D6R9N7 530 aa12.31□□□□□ -0.44
PDCD4-202ENST00000393104 USP17L22D6RA61 530 aa12.31□□□□□ -0.44
PDCD4-202ENST00000393104 USP17L17D6RBQ6 530 aa12.31□□□□□ -0.44
PDCD4-202ENST00000393104 USP17L19D6RCP7 530 aa12.31□□□□□ -0.44
PDCD4-202ENST00000393104 USP17L20D6RJB6 530 aa12.31□□□□□ -0.44
PDCD4-202ENST00000393104 NR3C1P04150 777 aa12.31□□□□□ -0.44
PDCD4-202ENST00000393104 EZRP15311 586 aaKnown RBP12.31□□□□□ -0.44
PDCD4-202ENST00000393104 COPS2P61201 443 aa12.31□□□□□ -0.44
PDCD4-202ENST00000393104 USP17L24Q0WX57 530 aa12.31□□□□□ -0.44
PDCD4-202ENST00000393104 USP17L6PQ6QN14 398 aa12.31□□□□□ -0.44
PDCD4-202ENST00000393104 SEPT14Q6ZU15 432 aa12.31□□□□□ -0.44
PDCD4-202ENST00000393104 LRRC47Q8N1G4 583 aaKnown RBP12.31□□□□□ -0.44
PDCD4-202ENST00000393104 CCDC26Q8TAB7 109 aa12.31□□□□□ -0.44
PDCD4-202ENST00000393104 IFT43Q96FT9 208 aa12.31□□□□□ -0.44
PDCD4-202ENST00000393104 PWWP2AQ96N64 755 aa12.31□□□□□ -0.44
PDCD4-202ENST00000393104 DMAC2Q9NW81 257 aa12.31□□□□□ -0.44
PDCD4-202ENST00000393104 ARMCX3Q9UH62 379 aaPredicted RBP12.31□□□□□ -0.44
PDCD4-202ENST00000393104 DAAM1Q9Y4D1 1078 aa12.31□□□□□ -0.44
PDCD4-202ENST00000393104 CD2APQ9Y5K6 639 aa12.31□□□□□ -0.44
PDCD4-202ENST00000393104 FAM86B1E9PN63 330 aa12.31□□□□□ -0.44
PDCD4-202ENST00000393104 ZBTB39O15060 712 aa12.31□□□□□ -0.44
PDCD4-202ENST00000393104 FAM86B2P0C5J1 330 aa12.31□□□□□ -0.44
PDCD4-202ENST00000393104 AKR1B1P15121 316 aa12.31□□□□□ -0.44
PDCD4-202ENST00000393104 KCNA3P22001 575 aa12.31□□□□□ -0.44
PDCD4-202ENST00000393104 KIF22Q14807 665 aa12.31□□□□□ -0.44
PDCD4-202ENST00000393104 LONRF1Q17RB8 773 aa12.31□□□□□ -0.44
PDCD4-202ENST00000393104 ANKRD20A2Q5SQ80 823 aa12.31□□□□□ -0.44
PDCD4-202ENST00000393104 ANKRD20A1Q5TYW2 823 aa12.31□□□□□ -0.44
PDCD4-202ENST00000393104 ANKRD20A3Q5VUR7 823 aa12.31□□□□□ -0.44
PDCD4-202ENST00000393104 BTNL9Q6UXG8 535 aa12.31□□□□□ -0.44
PDCD4-202ENST00000393104 ZNF444Q8N0Y2 327 aaPredicted RBP12.31□□□□□ -0.44
PDCD4-202ENST00000393104 PSPC1Q8WXF1 523 aaKnown RBP12.31□□□□□ -0.44
PDCD4-202ENST00000393104 STRA6Q9BX79 667 aa12.31□□□□□ -0.44
PDCD4-202ENST00000393104 TMX4Q9H1E5 349 aaPredicted RBP12.31□□□□□ -0.44
PDCD4-202ENST00000393104 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.31□□□□□ -0.44
PDCD4-202ENST00000393104 LRRC42Q9Y546 428 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms