RNA–Protein interactions for RNA: ENST00000390399.3

TRBV27-201, Transcript of T cell receptor beta variable 27, humanhuman

APPRIS P1 BASIC

Gene TRBV27, Length 387 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27-201ENST00000390399 PPP4R3CPQ6ZMV5 832 aa9.9□□□□□ -0.82
TRBV27-201ENST00000390399 AGMOQ6ZNB7 445 aa9.9□□□□□ -0.82
TRBV27-201ENST00000390399 EP400NLQ6ZTU2 488 aa9.9□□□□□ -0.82
TRBV27-201ENST00000390399 KCNK18Q7Z418 384 aa9.9□□□□□ -0.82
TRBV27-201ENST00000390399 MRPL10Q7Z7H8 261 aaKnown RBP9.9□□□□□ -0.82
TRBV27-201ENST00000390399 CNNM3Q8NE01 707 aa9.9□□□□□ -0.82
TRBV27-201ENST00000390399 URGCPQ8TCY9 931 aa9.9□□□□□ -0.82
TRBV27-201ENST00000390399 ADAMTS19Q8TE59 1207 aa9.9□□□□□ -0.82
TRBV27-201ENST00000390399 KIFAP3Q92845 792 aa9.9□□□□□ -0.82
TRBV27-201ENST00000390399 PPP2R3CQ969Q6 453 aa9.9□□□□□ -0.82
TRBV27-201ENST00000390399 SNX21Q969T3 373 aa9.9□□□□□ -0.82
TRBV27-201ENST00000390399 PABPC5Q96DU9 382 aaKnown RBP9.9□□□□□ -0.82
TRBV27-201ENST00000390399 CDK5RAP3Q96JB5 506 aa9.9□□□□□ -0.82
TRBV27-201ENST00000390399 IFT74Q96LB3 600 aa9.9□□□□□ -0.82
TRBV27-201ENST00000390399 PRIMPOLQ96LW4 560 aa9.9□□□□□ -0.82
TRBV27-201ENST00000390399 AK8Q96MA6 479 aa9.9□□□□□ -0.82
TRBV27-201ENST00000390399 EIF2AQ9BY44 585 aaKnown RBP9.9□□□□□ -0.82
TRBV27-201ENST00000390399 TRIM6Q9C030 488 aaPredicted RBP9.9□□□□□ -0.82
TRBV27-201ENST00000390399 NT5C3AQ9H0P0 336 aa9.9□□□□□ -0.82
TRBV27-201ENST00000390399 CSRNP2Q9H175 543 aa9.9□□□□□ -0.82
TRBV27-201ENST00000390399 RSAD1Q9HA92 442 aa9.9□□□□□ -0.82
TRBV27-201ENST00000390399 TLR9Q9NR96 1032 aa9.9□□□□□ -0.82
TRBV27-201ENST00000390399 TBC1D13Q9NVG8 400 aa9.9□□□□□ -0.82
TRBV27-201ENST00000390399 SPG21Q9NZD8 308 aa9.9□□□□□ -0.82
TRBV27-201ENST00000390399 IPPQ9Y573 584 aa9.9□□□□□ -0.82
TRBV27-201ENST00000390399 XIRP2A4UGR9 3374 aa9.9□□□□□ -0.82
TRBV27-201ENST00000390399 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.89□□□□□ -0.83
TRBV27-201ENST00000390399 NCK2O43639 380 aa9.89□□□□□ -0.83
TRBV27-201ENST00000390399 ZC3H11AO75152 810 aaKnown RBP eCLIP9.89□□□□□ -0.83
TRBV27-201ENST00000390399 NPTXRO95502 500 aa9.89□□□□□ -0.83
TRBV27-201ENST00000390399 SSBP05455 408 aaKnown RBP eCLIP9.89□□□□□ -0.83
TRBV27-201ENST00000390399 PRKCBP05771 671 aa9.89□□□□□ -0.83
TRBV27-201ENST00000390399 ITGA4P13612 1032 aa9.89□□□□□ -0.83
TRBV27-201ENST00000390399 LIG1P18858 919 aa9.89□□□□□ -0.83
TRBV27-201ENST00000390399 ALDH7A1P49419 539 aaKnown RBP9.89□□□□□ -0.83
TRBV27-201ENST00000390399 BCAR1P56945 870 aa9.89□□□□□ -0.83
TRBV27-201ENST00000390399 KRT17Q04695 432 aa9.89□□□□□ -0.83
TRBV27-201ENST00000390399 RNASELQ05823 741 aaKnown RBP9.89□□□□□ -0.83
TRBV27-201ENST00000390399 COL19A1Q14993 1142 aa9.89□□□□□ -0.83
TRBV27-201ENST00000390399 MAPK6Q16659 721 aa9.89□□□□□ -0.83
TRBV27-201ENST00000390399 FAM187BQ17R55 369 aa9.89□□□□□ -0.83
TRBV27-201ENST00000390399 TMEM132AQ24JP5 1023 aa9.89□□□□□ -0.83
TRBV27-201ENST00000390399 LEXMQ3ZCV2 418 aa9.89□□□□□ -0.83
TRBV27-201ENST00000390399 HYIQ5T013 277 aa9.89□□□□□ -0.83
TRBV27-201ENST00000390399 SLC27A1Q6PCB7 646 aa9.89□□□□□ -0.83
TRBV27-201ENST00000390399 ADGRD2Q7Z7M1 963 aa9.89□□□□□ -0.83
TRBV27-201ENST00000390399 CABP7Q86V35 215 aa9.89□□□□□ -0.83
TRBV27-201ENST00000390399 CDR2LQ86X02 465 aaPredicted RBP9.89□□□□□ -0.83
TRBV27-201ENST00000390399 HACE1Q8IYU2 909 aa9.89□□□□□ -0.83
TRBV27-201ENST00000390399 SLC39A11Q8N1S5 342 aa9.89□□□□□ -0.83
TRBV27-201ENST00000390399 SMG8Q8ND04 991 aaKnown RBP9.89□□□□□ -0.83
TRBV27-201ENST00000390399 MICAL1Q8TDZ2 1067 aa9.89□□□□□ -0.83
TRBV27-201ENST00000390399 MRPS27Q92552 414 aaKnown RBP9.89□□□□□ -0.83
TRBV27-201ENST00000390399 PNMA5Q96PV4 448 aa9.89□□□□□ -0.83
TRBV27-201ENST00000390399 PLIN2Q99541 437 aa9.89□□□□□ -0.83
TRBV27-201ENST00000390399 KIFC3Q9BVG8 833 aa9.89□□□□□ -0.83
TRBV27-201ENST00000390399 RUSC1Q9BVN2 902 aa9.89□□□□□ -0.83
TRBV27-201ENST00000390399 APOL6Q9BWW8 343 aa9.89□□□□□ -0.83
TRBV27-201ENST00000390399 GBP3Q9H0R5 595 aa9.89□□□□□ -0.83
TRBV27-201ENST00000390399 FZD8Q9H461 694 aa9.89□□□□□ -0.83
TRBV27-201ENST00000390399 NXF3Q9H4D5 531 aaKnown RBP9.89□□□□□ -0.83
TRBV27-201ENST00000390399 IGFLR1Q9H665 355 aa9.89□□□□□ -0.83
TRBV27-201ENST00000390399 POLD4Q9HCU8 107 aa9.89□□□□□ -0.83
TRBV27-201ENST00000390399 UBN1Q9NPG3 1134 aa9.89□□□□□ -0.83
TRBV27-201ENST00000390399 CLDND1Q9NY35 253 aa9.89□□□□□ -0.83
TRBV27-201ENST00000390399 PUF60Q9UHX1 559 aaKnown RBP9.89□□□□□ -0.83
TRBV27-201ENST00000390399 LZTS1Q9Y250 596 aa9.89□□□□□ -0.83
TRBV27-201ENST00000390399 HES2Q9Y543 173 aa9.89□□□□□ -0.83
TRBV27-201ENST00000390399 PCDHGC5Q9Y5F6 944 aa9.89□□□□□ -0.83
TRBV27-201ENST00000390399 CLIC4Q9Y696 253 aa9.89□□□□□ -0.83
TRBV27-201ENST00000390399 A0A1B0GUA9 196 aa9.88□□□□□ -0.83
TRBV27-201ENST00000390399 CARNS1A5YM72 827 aa9.88□□□□□ -0.83
TRBV27-201ENST00000390399 NT5C1B-RDH14C9J2C7 533 aa9.88□□□□□ -0.83
TRBV27-201ENST00000390399 FSCN2O14926 492 aa9.88□□□□□ -0.83
TRBV27-201ENST00000390399 N4BP3O15049 544 aa9.88□□□□□ -0.83
TRBV27-201ENST00000390399 SLC26A4O43511 780 aa9.88□□□□□ -0.83
TRBV27-201ENST00000390399 STX6O43752 255 aa9.88□□□□□ -0.83
TRBV27-201ENST00000390399 HIP1RO75146 1068 aa9.88□□□□□ -0.83
TRBV27-201ENST00000390399 HSP90AA1P07900 732 aaKnown RBP9.88□□□□□ -0.83
TRBV27-201ENST00000390399 BMP1P13497 986 aa9.88□□□□□ -0.83
TRBV27-201ENST00000390399 GTF2F1P35269 517 aaKnown RBP eCLIP9.88□□□□□ -0.83
TRBV27-201ENST00000390399 LONP1P36776 959 aaKnown RBP9.88□□□□□ -0.83
TRBV27-201ENST00000390399 MLH1P40692 756 aa9.88□□□□□ -0.83
TRBV27-201ENST00000390399 UBA7P41226 1012 aa9.88□□□□□ -0.83
TRBV27-201ENST00000390399 NRIP1P48552 1158 aa9.88□□□□□ -0.83
TRBV27-201ENST00000390399 EFNA5P52803 228 aa9.88□□□□□ -0.83
TRBV27-201ENST00000390399 ERVFC1P60507 584 aa9.88□□□□□ -0.83
TRBV27-201ENST00000390399 PRPF4BQ13523 1007 aaKnown RBP9.88□□□□□ -0.83
TRBV27-201ENST00000390399 TMEM119Q4V9L6 283 aa9.88□□□□□ -0.83
TRBV27-201ENST00000390399 PLPP4Q5VZY2 271 aa9.88□□□□□ -0.83
TRBV27-201ENST00000390399 PDE12Q6L8Q7 609 aaKnown RBP9.88□□□□□ -0.83
TRBV27-201ENST00000390399 RINT1Q6NUQ1 792 aa9.88□□□□□ -0.83
TRBV27-201ENST00000390399 KCTD17Q8N5Z5 321 aa9.88□□□□□ -0.83
TRBV27-201ENST00000390399 RASSF8Q8NHQ8 419 aa9.88□□□□□ -0.83
TRBV27-201ENST00000390399 CALML4Q96GE6 196 aa9.88□□□□□ -0.83
TRBV27-201ENST00000390399 TMEM169Q96HH4 297 aa9.88□□□□□ -0.83
TRBV27-201ENST00000390399 DRC1Q96MC2 740 aa9.88□□□□□ -0.83
TRBV27-201ENST00000390399 FAM193BQ96PV7 902 aaPredicted RBP9.88□□□□□ -0.83
TRBV27-201ENST00000390399 UHRF1Q96T88 793 aaPredicted RBP9.88□□□□□ -0.83
TRBV27-201ENST00000390399 TCF25Q9BQ70 676 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms