RNA–Protein interactions for RNA: ENST00000389645.7

CAPRIN1-202, Transcript of cell cycle associated protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPRIN1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-202ENST00000389645 WRAP73Q9P2S5 460 aaPredicted RBP13.08□□□□□ -0.32
CAPRIN1-202ENST00000389645 TRAF3IP3Q9Y228 551 aa13.08□□□□□ -0.32
CAPRIN1-202ENST00000389645 AFG3L2Q9Y4W6 797 aa13.08□□□□□ -0.32
CAPRIN1-202ENST00000389645 SNCAIPQ9Y6H5 919 aa13.08□□□□□ -0.32
CAPRIN1-202ENST00000389645 GAP43P17677 238 aa13.07□□□□□ -0.32
CAPRIN1-202ENST00000389645 FMO5P49326 533 aa13.07□□□□□ -0.32
CAPRIN1-202ENST00000389645 IRAK1P51617 712 aa13.07□□□□□ -0.32
CAPRIN1-202ENST00000389645 MESDQ14696 234 aa13.07□□□□□ -0.32
CAPRIN1-202ENST00000389645 PADI6Q6TGC4 694 aa13.07□□□□□ -0.32
CAPRIN1-202ENST00000389645 RNF207Q6ZRF8 634 aa13.07□□□□□ -0.32
CAPRIN1-202ENST00000389645 CCDC25Q86WR0 208 aa13.07□□□□□ -0.32
CAPRIN1-202ENST00000389645 SYN2Q92777 582 aaPredicted RBP13.07□□□□□ -0.32
CAPRIN1-202ENST00000389645 RMDN3Q96TC7 470 aa13.07□□□□□ -0.32
CAPRIN1-202ENST00000389645 ELP3Q9H9T3 547 aa13.07□□□□□ -0.32
CAPRIN1-202ENST00000389645 DDX3XO00571 662 aaKnown RBP eCLIP13.07□□□□□ -0.327e-43■■■■□ 20.8
CAPRIN1-202ENST00000389645 TTI1O43156 1089 aa13.07□□□□□ -0.32
CAPRIN1-202ENST00000389645 TGFB1I1O43294 461 aa13.07□□□□□ -0.32
CAPRIN1-202ENST00000389645 LCA5LO95447 670 aa13.07□□□□□ -0.32
CAPRIN1-202ENST00000389645 SSR1P43307 286 aaKnown RBP13.07□□□□□ -0.32
CAPRIN1-202ENST00000389645 PEX3P56589 373 aa13.07□□□□□ -0.32
CAPRIN1-202ENST00000389645 GPR162Q16538 588 aa13.07□□□□□ -0.32
CAPRIN1-202ENST00000389645 MXRA8Q9BRK3 442 aa13.07□□□□□ -0.32
CAPRIN1-202ENST00000389645 ACP6Q9NPH0 428 aa13.07□□□□□ -0.32
CAPRIN1-202ENST00000389645 GPRC5CQ9NQ84 441 aa13.07□□□□□ -0.32
CAPRIN1-202ENST00000389645 LARSQ9P2J5 1176 aaKnown RBP13.07□□□□□ -0.32
CAPRIN1-202ENST00000389645 ATMINO43313 823 aaPredicted RBP13.07□□□□□ -0.32
CAPRIN1-202ENST00000389645 PPFIA4O75335 1185 aa13.07□□□□□ -0.32
CAPRIN1-202ENST00000389645 DLATP10515 647 aaKnown RBP13.07□□□□□ -0.32
CAPRIN1-202ENST00000389645 EPHA7Q15375 998 aa13.07□□□□□ -0.32
CAPRIN1-202ENST00000389645 SLC35G2Q8TBE7 412 aa13.07□□□□□ -0.32
CAPRIN1-202ENST00000389645 SLC5A5Q92911 643 aa13.07□□□□□ -0.32
CAPRIN1-202ENST00000389645 SGSM3Q96HU1 749 aa13.07□□□□□ -0.32
CAPRIN1-202ENST00000389645 TRIM51Q9BSJ1 452 aa13.07□□□□□ -0.32
CAPRIN1-202ENST00000389645 KIFC3Q9BVG8 833 aa13.07□□□□□ -0.32
CAPRIN1-202ENST00000389645 RNF14Q9UBS8 474 aa13.07□□□□□ -0.32
CAPRIN1-202ENST00000389645 ATP8A1Q9Y2Q0 1164 aa13.07□□□□□ -0.32
CAPRIN1-202ENST00000389645 EMSYQ7Z589 1322 aa13.06□□□□□ -0.32
CAPRIN1-202ENST00000389645 BUB1BO60566 1050 aaPredicted RBP13.06□□□□□ -0.32
CAPRIN1-202ENST00000389645 KIAA0754O94854 1291 aa13.06□□□□□ -0.32
CAPRIN1-202ENST00000389645 AARSP49588 968 aaKnown RBP eCLIP13.06□□□□□ -0.32
CAPRIN1-202ENST00000389645 XKR9Q5GH70 373 aa13.06□□□□□ -0.32
CAPRIN1-202ENST00000389645 MCF2L2Q86YR7 1114 aa13.06□□□□□ -0.32
CAPRIN1-202ENST00000389645 TPCN2Q8NHX9 752 aa13.06□□□□□ -0.32
CAPRIN1-202ENST00000389645 BICD1Q96G01 975 aa13.06□□□□□ -0.32
CAPRIN1-202ENST00000389645 OTUD5Q96G74 571 aa13.06□□□□□ -0.32
CAPRIN1-202ENST00000389645 INTS2Q9H0H0 1204 aaKnown RBP13.06□□□□□ -0.32
CAPRIN1-202ENST00000389645 GINM1Q9NU53 330 aa13.06□□□□□ -0.32
CAPRIN1-202ENST00000389645 SLC16A4O15374 487 aa13.06□□□□□ -0.32
CAPRIN1-202ENST00000389645 SOX5P35711 763 aa13.06□□□□□ -0.32
CAPRIN1-202ENST00000389645 GJC1P36383 396 aa13.06□□□□□ -0.32
CAPRIN1-202ENST00000389645 KRT71Q3SY84 523 aa13.06□□□□□ -0.32
CAPRIN1-202ENST00000389645 CCDC91Q7Z6B0 441 aa13.06□□□□□ -0.32
CAPRIN1-202ENST00000389645 SAAL1Q96ER3 474 aa13.06□□□□□ -0.32
CAPRIN1-202ENST00000389645 HSD17B14Q9BPX1 270 aa13.06□□□□□ -0.32
CAPRIN1-202ENST00000389645 AGPAT3Q9NRZ7 376 aa13.06□□□□□ -0.32
CAPRIN1-202ENST00000389645 TAS2R14Q9NYV8 317 aa13.06□□□□□ -0.32
CAPRIN1-202ENST00000389645 UTP11Q9Y3A2 253 aaKnown RBP13.06□□□□□ -0.32
CAPRIN1-202ENST00000389645 CENPFP49454 3210 aa13.06□□□□□ -0.32
CAPRIN1-202ENST00000389645 FOXN3O00409 490 aaPredicted RBP13.05□□□□□ -0.32
CAPRIN1-202ENST00000389645 ATP9AO75110 1047 aa13.05□□□□□ -0.32
CAPRIN1-202ENST00000389645 MYZAPP0CAP1 466 aa13.05□□□□□ -0.32
CAPRIN1-202ENST00000389645 DSG3P32926 999 aa13.05□□□□□ -0.32
CAPRIN1-202ENST00000389645 MAP2K1Q02750 393 aaPredicted RBP13.05□□□□□ -0.32
CAPRIN1-202ENST00000389645 CATSPERGQ6ZRH7 1159 aa13.05□□□□□ -0.32
CAPRIN1-202ENST00000389645 CCDC26Q8TAB7 109 aa13.05□□□□□ -0.32
CAPRIN1-202ENST00000389645 FAM84AQ96KN4 292 aa13.05□□□□□ -0.32
CAPRIN1-202ENST00000389645 CALR3Q96L12 384 aaKnown RBP13.05□□□□□ -0.32
CAPRIN1-202ENST00000389645 CBWD1Q9BRT8 395 aa13.05□□□□□ -0.32
CAPRIN1-202ENST00000389645 ZNF214Q9UL59 606 aaPredicted RBP13.05□□□□□ -0.32
CAPRIN1-202ENST00000389645 PTPN22Q9Y2R2 807 aa13.05□□□□□ -0.32
CAPRIN1-202ENST00000389645 GOLGA6L10A0A0M3HER8 536 aa13.05□□□□□ -0.32
CAPRIN1-202ENST00000389645 E7EVH7 732 aa13.05□□□□□ -0.32
CAPRIN1-202ENST00000389645 SPOPO43791 374 aa13.05□□□□□ -0.32
CAPRIN1-202ENST00000389645 ERLIN2O94905 339 aa13.05□□□□□ -0.32
CAPRIN1-202ENST00000389645 KRT5P13647 590 aa13.05□□□□□ -0.32
CAPRIN1-202ENST00000389645 NPEPPSP55786 919 aa13.05□□□□□ -0.32
CAPRIN1-202ENST00000389645 DHX9Q08211 1270 aaKnown RBP13.05□□□□□ -0.32
CAPRIN1-202ENST00000389645 TKFCQ3LXA3 575 aa13.05□□□□□ -0.32
CAPRIN1-202ENST00000389645 TTMPQ5BVD1 217 aa13.05□□□□□ -0.32
CAPRIN1-202ENST00000389645 ARHGEF16Q5VV41 709 aa13.05□□□□□ -0.32
CAPRIN1-202ENST00000389645 DPY19L2Q6NUT2 758 aa13.05□□□□□ -0.32
CAPRIN1-202ENST00000389645 THAP2Q9H0W7 228 aa13.05□□□□□ -0.32
CAPRIN1-202ENST00000389645 PCDHGC5Q9Y5F6 944 aa13.05□□□□□ -0.32
CAPRIN1-202ENST00000389645 C19orf81C9J6K1 198 aa13.05□□□□□ -0.32
CAPRIN1-202ENST00000389645 NR1D1P20393 614 aa13.05□□□□□ -0.32
CAPRIN1-202ENST00000389645 SEC24CP53992 1094 aa13.05□□□□□ -0.32
CAPRIN1-202ENST00000389645 PLTPP55058 493 aa13.05□□□□□ -0.32
CAPRIN1-202ENST00000389645 ERVK-9P63128 1117 aa13.05□□□□□ -0.32
CAPRIN1-202ENST00000389645 DLG4P78352 724 aa13.05□□□□□ -0.32
CAPRIN1-202ENST00000389645 ITGB3BPQ13352 177 aaPredicted RBP13.05□□□□□ -0.32
CAPRIN1-202ENST00000389645 GLE1Q53GS7 698 aaKnown RBP13.05□□□□□ -0.32
CAPRIN1-202ENST00000389645 ALS2CLQ60I27 953 aa13.05□□□□□ -0.32
CAPRIN1-202ENST00000389645 PLA2G4FQ68DD2 849 aa13.05□□□□□ -0.32
CAPRIN1-202ENST00000389645 RPAINQ86UA6 219 aa13.05□□□□□ -0.32
CAPRIN1-202ENST00000389645 TAX1BP1Q86VP1 789 aa13.05□□□□□ -0.32
CAPRIN1-202ENST00000389645 PALB2Q86YC2 1186 aa13.05□□□□□ -0.32
CAPRIN1-202ENST00000389645 SYCE1Q8N0S2 351 aa13.05□□□□□ -0.32
CAPRIN1-202ENST00000389645 INPP4AQ96PE3 977 aaPredicted RBP13.05□□□□□ -0.32
CAPRIN1-202ENST00000389645 POLR3CQ9BUI4 534 aaPredicted RBP13.05□□□□□ -0.32
CAPRIN1-202ENST00000389645 R3HDMLQ9H3Y0 253 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms