RNA–Protein interactions for RNA: ENST00000389547.7

PPFIA1-202, Transcript of PTPRF interacting protein alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPFIA1, Length 4,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-202ENST00000389547 GNAT1P11488 350 aa20.25■□□□□ 0.83
PPFIA1-202ENST00000389547 LIG4P49917 911 aa20.25■□□□□ 0.83
PPFIA1-202ENST00000389547 CROCCP2Q86T23 111 aa20.25■□□□□ 0.83
PPFIA1-202ENST00000389547 RNF168Q8IYW5 571 aaPredicted RBP20.25■□□□□ 0.83
PPFIA1-202ENST00000389547 MIPOL1Q8TD10 442 aa20.25■□□□□ 0.83
PPFIA1-202ENST00000389547 CDHR1Q96JP9 859 aa20.25■□□□□ 0.83
PPFIA1-202ENST00000389547 CAPN6Q9Y6Q1 641 aa20.25■□□□□ 0.83
PPFIA1-202ENST00000389547 ABCA3Q99758 1704 aa20.24■□□□□ 0.83
PPFIA1-202ENST00000389547 WDR64B1ANS9 1081 aa20.24■□□□□ 0.83
PPFIA1-202ENST00000389547 C19orf81C9J6K1 198 aa20.24■□□□□ 0.83
PPFIA1-202ENST00000389547 GNA14O95837 355 aa20.24■□□□□ 0.83
PPFIA1-202ENST00000389547 QARSP47897 775 aaKnown RBP20.24■□□□□ 0.83
PPFIA1-202ENST00000389547 SKOR1P84550 965 aa20.24■□□□□ 0.83
PPFIA1-202ENST00000389547 MAP1SQ66K74 1059 aaPredicted RBP20.24■□□□□ 0.83
PPFIA1-202ENST00000389547 CCDC105Q8IYK2 499 aa20.24■□□□□ 0.83
PPFIA1-202ENST00000389547 NAP1L3Q99457 506 aaPredicted RBP20.24■□□□□ 0.83
PPFIA1-202ENST00000389547 CREB3O43889 395 aa20.24■□□□□ 0.83
PPFIA1-202ENST00000389547 PPP1R11O60927 126 aaPredicted RBP20.24■□□□□ 0.83
PPFIA1-202ENST00000389547 MED24O75448 989 aa20.24■□□□□ 0.83
PPFIA1-202ENST00000389547 ICAM1P05362 532 aa20.24■□□□□ 0.83
PPFIA1-202ENST00000389547 ABCB4P21439 1286 aa20.24■□□□□ 0.83
PPFIA1-202ENST00000389547 EXOC3L4Q17RC7 722 aa20.24■□□□□ 0.83
PPFIA1-202ENST00000389547 RAPGEF5Q92565 580 aa20.24■□□□□ 0.83
PPFIA1-202ENST00000389547 THAP9Q9H5L6 903 aa20.24■□□□□ 0.83
PPFIA1-202ENST00000389547 KMT5AQ9NQR1 393 aa20.24■□□□□ 0.83
PPFIA1-202ENST00000389547 ADAMTS7Q9UKP4 1686 aa20.24■□□□□ 0.83
PPFIA1-202ENST00000389547 FAM86B1E9PN63 330 aa20.24■□□□□ 0.83
PPFIA1-202ENST00000389547 FAM86B2P0C5J1 330 aa20.24■□□□□ 0.83
PPFIA1-202ENST00000389547 RASSF2P50749 326 aa20.24■□□□□ 0.83
PPFIA1-202ENST00000389547 FXR2P51116 673 aaKnown RBP eCLIP20.24■□□□□ 0.831e-6■■■■□ 23.7
PPFIA1-202ENST00000389547 PDE6CP51160 858 aa20.24■□□□□ 0.83
PPFIA1-202ENST00000389547 CCNA1P78396 465 aa20.24■□□□□ 0.83
PPFIA1-202ENST00000389547 MOB2Q70IA6 237 aa20.24■□□□□ 0.83
PPFIA1-202ENST00000389547 NEK9Q8TD19 979 aa20.24■□□□□ 0.83
PPFIA1-202ENST00000389547 ABTB1Q969K4 478 aaPredicted RBP20.24■□□□□ 0.83
PPFIA1-202ENST00000389547 ADARB2Q9NS39 739 aaKnown RBP20.24■□□□□ 0.83
PPFIA1-202ENST00000389547 GPRC5DQ9NZD1 345 aa20.24■□□□□ 0.83
PPFIA1-202ENST00000389547 IQCA1LA6NCM1 817 aa20.23■□□□□ 0.83
PPFIA1-202ENST00000389547 TXNDC9O14530 226 aa20.23■□□□□ 0.83
PPFIA1-202ENST00000389547 OPHN1O60890 802 aa20.23■□□□□ 0.83
PPFIA1-202ENST00000389547 HERVK_113P62684 666 aa20.23■□□□□ 0.83
PPFIA1-202ENST00000389547 IL17AQ16552 155 aa20.23■□□□□ 0.83
PPFIA1-202ENST00000389547 VCX3BQ9H321 246 aa20.23■□□□□ 0.83
PPFIA1-202ENST00000389547 VCX3AQ9NNX9 186 aa20.23■□□□□ 0.83
PPFIA1-202ENST00000389547 PAPOLBQ9NRJ5 636 aaKnown RBP20.23■□□□□ 0.83
PPFIA1-202ENST00000389547 DAPK3O43293 454 aa20.23■□□□□ 0.83
PPFIA1-202ENST00000389547 P4HBP07237 508 aaKnown RBP20.23■□□□□ 0.83
PPFIA1-202ENST00000389547 ZC3H18Q86VM9 953 aaKnown RBP20.23■□□□□ 0.83
PPFIA1-202ENST00000389547 DDX27Q96GQ7 796 aaKnown RBP20.23■□□□□ 0.83
PPFIA1-202ENST00000389547 TBC1D22BQ9NU19 505 aa20.23■□□□□ 0.83
PPFIA1-202ENST00000389547 NWD2Q9ULI1 1742 aa20.23■□□□□ 0.83
PPFIA1-202ENST00000389547 PPP1R3GB7ZBB8 358 aa20.23■□□□□ 0.83
PPFIA1-202ENST00000389547 FAM153BP0C7A2 387 aa20.23■□□□□ 0.83
PPFIA1-202ENST00000389547 GAP43P17677 238 aa20.23■□□□□ 0.83
PPFIA1-202ENST00000389547 KLK7P49862 253 aa20.23■□□□□ 0.83
PPFIA1-202ENST00000389547 FAM153CQ494X1 144 aa20.23■□□□□ 0.83
PPFIA1-202ENST00000389547 FKBP1CQ5VVH2 108 aa20.23■□□□□ 0.83
PPFIA1-202ENST00000389547 RBM46Q8TBY0 533 aaKnown RBP20.23■□□□□ 0.83
PPFIA1-202ENST00000389547 IQCDQ96DY2 449 aa20.23■□□□□ 0.83
PPFIA1-202ENST00000389547 REEP2Q9BRK0 252 aa20.23■□□□□ 0.83
PPFIA1-202ENST00000389547 FAM153AQ9UHL3 310 aa20.23■□□□□ 0.83
PPFIA1-202ENST00000389547 AMFRQ9UKV5 643 aa20.23■□□□□ 0.83
PPFIA1-202ENST00000389547 PPP1R9AQ9ULJ8 1098 aa20.23■□□□□ 0.83
PPFIA1-202ENST00000389547 LRRC53A6NM62 1247 aa20.22■□□□□ 0.83
PPFIA1-202ENST00000389547 RHOBTB3O94955 611 aa20.22■□□□□ 0.83
PPFIA1-202ENST00000389547 LRRC63Q05C16 580 aa20.22■□□□□ 0.83
PPFIA1-202ENST00000389547 GPC2Q8N158 579 aa20.22■□□□□ 0.83
PPFIA1-202ENST00000389547 TEKT4Q8WW24 435 aa20.22■□□□□ 0.83
PPFIA1-202ENST00000389547 XPO6Q96QU8 1125 aaKnown RBP20.22■□□□□ 0.83
PPFIA1-202ENST00000389547 ASIC3Q9UHC3 531 aa20.22■□□□□ 0.83
PPFIA1-202ENST00000389547 SLC16A4O15374 487 aa20.22■□□□□ 0.83
PPFIA1-202ENST00000389547 CUL3Q13618 768 aa20.22■□□□□ 0.83
PPFIA1-202ENST00000389547 SLC35G1Q2M3R5 365 aa20.22■□□□□ 0.83
PPFIA1-202ENST00000389547 TRPM8Q7Z2W7 1104 aa20.22■□□□□ 0.83
PPFIA1-202ENST00000389547 C2orf69Q8N8R5 385 aa20.22■□□□□ 0.83
PPFIA1-202ENST00000389547 VPS33BQ9H267 617 aa20.22■□□□□ 0.83
PPFIA1-202ENST00000389547 DAAM1Q9Y4D1 1078 aa20.22■□□□□ 0.83
PPFIA1-202ENST00000389547 ZNF541Q9H0D2 1346 aa20.22■□□□□ 0.83
PPFIA1-202ENST00000389547 ACCSLQ4AC99 568 aa20.22■□□□□ 0.83
PPFIA1-202ENST00000389547 PPM1KQ8N3J5 372 aa20.22■□□□□ 0.83
PPFIA1-202ENST00000389547 GUF1Q8N442 669 aaKnown RBP20.22■□□□□ 0.83
PPFIA1-202ENST00000389547 C7orf43Q8WVR3 580 aa20.22■□□□□ 0.83
PPFIA1-202ENST00000389547 PURBQ96QR8 312 aaKnown RBP20.22■□□□□ 0.83
PPFIA1-202ENST00000389547 A1CFQ9NQ94 594 aaKnown RBP20.22■□□□□ 0.83
PPFIA1-202ENST00000389547 C15orf41Q9Y2V0 281 aa20.22■□□□□ 0.83
PPFIA1-202ENST00000389547 IGF2BP3O00425 579 aaKnown RBP eCLIP20.21■□□□□ 0.83
PPFIA1-202ENST00000389547 GLI1P08151 1106 aa20.21■□□□□ 0.83
PPFIA1-202ENST00000389547 PLEKP08567 350 aaPredicted RBP20.21■□□□□ 0.83
PPFIA1-202ENST00000389547 CNGA1P29973 690 aa20.21■□□□□ 0.83
PPFIA1-202ENST00000389547 EPHX2P34913 555 aa20.21■□□□□ 0.83
PPFIA1-202ENST00000389547 NPEPPSP55786 919 aa20.21■□□□□ 0.83
PPFIA1-202ENST00000389547 MAP7Q14244 749 aa20.21■□□□□ 0.83
PPFIA1-202ENST00000389547 MIS18BP1Q6P0N0 1132 aa20.21■□□□□ 0.83
PPFIA1-202ENST00000389547 C7orf25Q9BPX7 421 aa20.21■□□□□ 0.83
PPFIA1-202ENST00000389547 NRBP2Q9NSY0 501 aa20.21■□□□□ 0.83
PPFIA1-202ENST00000389547 MYH3P11055 1940 aa20.21■□□□□ 0.83
PPFIA1-202ENST00000389547 ROBO3Q96MS0 1386 aa20.21■□□□□ 0.83
PPFIA1-202ENST00000389547 SHOX2O60902 331 aaPredicted RBP20.21■□□□□ 0.83
PPFIA1-202ENST00000389547 BAG2O95816 211 aa20.21■□□□□ 0.83
PPFIA1-202ENST00000389547 PSAPP07602 524 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms