RNA–Protein interactions for RNA: ENST00000381867.5

SNPH-201, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-201ENST00000381867 ACAD11Q709F0 780 aa14.9□□□□□ -0.02
SNPH-201ENST00000381867 COG1Q8WTW3 980 aa14.9□□□□□ -0.02
SNPH-201ENST00000381867 RUBCNQ92622 972 aa14.9□□□□□ -0.02
SNPH-201ENST00000381867 FAF2Q96CS3 445 aa14.9□□□□□ -0.02
SNPH-201ENST00000381867 KLC2Q9H0B6 622 aa14.9□□□□□ -0.02
SNPH-201ENST00000381867 PDS5AQ29RF7 1337 aaKnown RBP14.9□□□□□ -0.02
SNPH-201ENST00000381867 UBN2Q6ZU65 1347 aa14.9□□□□□ -0.02
SNPH-201ENST00000381867 USP17L15C9J2P7 530 aa14.9□□□□□ -0.02
SNPH-201ENST00000381867 USP17L13C9JLJ4 530 aa14.9□□□□□ -0.02
SNPH-201ENST00000381867 USP17L11C9JVI0 530 aa14.9□□□□□ -0.02
SNPH-201ENST00000381867 USP17L18D6R9N7 530 aa14.9□□□□□ -0.02
SNPH-201ENST00000381867 USP17L22D6RA61 530 aa14.9□□□□□ -0.02
SNPH-201ENST00000381867 USP17L17D6RBQ6 530 aa14.9□□□□□ -0.02
SNPH-201ENST00000381867 USP17L19D6RCP7 530 aa14.9□□□□□ -0.02
SNPH-201ENST00000381867 USP17L20D6RJB6 530 aa14.9□□□□□ -0.02
SNPH-201ENST00000381867 PLEKHA8P1O95397 391 aa14.9□□□□□ -0.02
SNPH-201ENST00000381867 USP17L24Q0WX57 530 aa14.9□□□□□ -0.02
SNPH-201ENST00000381867 CYB5R4Q7L1T6 521 aa14.9□□□□□ -0.02
SNPH-201ENST00000381867 NSUN6Q8TEA1 469 aaKnown RBP14.9□□□□□ -0.02
SNPH-201ENST00000381867 ZNF233A6NK53 670 aa14.89□□□□□ -0.03
SNPH-201ENST00000381867 LRRC53A6NM62 1247 aa14.89□□□□□ -0.03
SNPH-201ENST00000381867 XPAP23025 273 aaPredicted RBP14.89□□□□□ -0.03
SNPH-201ENST00000381867 RANBP1P43487 201 aa14.89□□□□□ -0.03
SNPH-201ENST00000381867 UNC13DQ70J99 1090 aa14.89□□□□□ -0.03
SNPH-201ENST00000381867 DHX38Q92620 1227 aaKnown RBP14.89□□□□□ -0.03
SNPH-201ENST00000381867 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.89□□□□□ -0.03
SNPH-201ENST00000381867 MAP3K14Q99558 947 aa14.89□□□□□ -0.03
SNPH-201ENST00000381867 ING2Q9H160 280 aa14.89□□□□□ -0.03
SNPH-201ENST00000381867 GOLPH3LQ9H4A5 285 aa14.89□□□□□ -0.03
SNPH-201ENST00000381867 SNX5Q9Y5X3 404 aa14.89□□□□□ -0.03
SNPH-201ENST00000381867 SLC26A4O43511 780 aa14.89□□□□□ -0.03
SNPH-201ENST00000381867 DDIT3P35638 169 aa14.89□□□□□ -0.03
SNPH-201ENST00000381867 KRT76Q01546 638 aa14.89□□□□□ -0.03
SNPH-201ENST00000381867 KIF19Q2TAC6 998 aa14.89□□□□□ -0.03
SNPH-201ENST00000381867 TTC1Q99614 292 aa14.89□□□□□ -0.03
SNPH-201ENST00000381867 SUCLA2Q9P2R7 463 aaPredicted RBP14.89□□□□□ -0.03
SNPH-201ENST00000381867 SUN2Q9UH99 717 aa14.89□□□□□ -0.03
SNPH-201ENST00000381867 KPNA7A9QM74 516 aa14.89□□□□□ -0.03
SNPH-201ENST00000381867 ATICP31939 592 aa14.89□□□□□ -0.03
SNPH-201ENST00000381867 ARFIP2P53365 341 aa14.89□□□□□ -0.03
SNPH-201ENST00000381867 ARPP19P56211 112 aa14.89□□□□□ -0.03
SNPH-201ENST00000381867 GRAMD1AQ96CP6 724 aa14.89□□□□□ -0.03
SNPH-201ENST00000381867 FAM161BQ96MY7 647 aa14.89□□□□□ -0.03
SNPH-201ENST00000381867 SNX25Q9H3E2 840 aa14.89□□□□□ -0.03
SNPH-201ENST00000381867 HACL1Q9UJ83 578 aa14.89□□□□□ -0.03
SNPH-201ENST00000381867 FLT1P17948 1338 aa14.89□□□□□ -0.03
SNPH-201ENST00000381867 A0A0G2JLW4 131 aa14.89□□□□□ -0.03
SNPH-201ENST00000381867 BRAFP15056 766 aa14.89□□□□□ -0.03
SNPH-201ENST00000381867 CACNB3P54284 484 aa14.89□□□□□ -0.03
SNPH-201ENST00000381867 NFRKBQ6P4R8 1299 aa14.89□□□□□ -0.03
SNPH-201ENST00000381867 BZW1Q7L1Q6 419 aaKnown RBP14.89□□□□□ -0.03
SNPH-201ENST00000381867 FMR1NBQ8N0W7 255 aaPredicted RBP14.89□□□□□ -0.03
SNPH-201ENST00000381867 PROM2Q8N271 834 aa14.89□□□□□ -0.03
SNPH-201ENST00000381867 CEP170P1Q96L14 293 aa14.89□□□□□ -0.03
SNPH-201ENST00000381867 TRIM33Q9UPN9 1127 aa14.89□□□□□ -0.03
SNPH-201ENST00000381867 SFNP31947 248 aa14.88□□□□□ -0.03
SNPH-201ENST00000381867 SCARF1Q14162 830 aa14.88□□□□□ -0.03
SNPH-201ENST00000381867 MICALL2Q8IY33 904 aa14.88□□□□□ -0.03
SNPH-201ENST00000381867 STAMBPL1Q96FJ0 436 aa14.88□□□□□ -0.03
SNPH-201ENST00000381867 PCDHA6Q9UN73 950 aa14.88□□□□□ -0.03
SNPH-201ENST00000381867 PCDHA8Q9Y5H6 950 aa14.88□□□□□ -0.03
SNPH-201ENST00000381867 PXDNQ92626 1479 aa14.88□□□□□ -0.03
SNPH-201ENST00000381867 SYCE1LA8MT33 242 aa14.88□□□□□ -0.03
SNPH-201ENST00000381867 ARHGDIAP52565 204 aa14.88□□□□□ -0.03
SNPH-201ENST00000381867 PPP4CP60510 307 aa14.88□□□□□ -0.03
SNPH-201ENST00000381867 TFAMQ00059 246 aaKnown RBP14.88□□□□□ -0.03
SNPH-201ENST00000381867 BARHL2Q9NY43 387 aa14.88□□□□□ -0.03
SNPH-201ENST00000381867 LCMT1Q9UIC8 334 aa14.88□□□□□ -0.03
SNPH-201ENST00000381867 DNAJC12Q9UKB3 198 aa14.88□□□□□ -0.03
SNPH-201ENST00000381867 FAM187AA6NFU0 413 aa14.88□□□□□ -0.03
SNPH-201ENST00000381867 F5H6K3 240 aa14.88□□□□□ -0.03
SNPH-201ENST00000381867 YWHAHQ04917 246 aaPredicted RBP14.88□□□□□ -0.03
SNPH-201ENST00000381867 KLRC3Q07444 240 aa14.88□□□□□ -0.03
SNPH-201ENST00000381867 ICA1LQ8NDH6 482 aa14.88□□□□□ -0.03
SNPH-201ENST00000381867 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.88□□□□□ -0.03
SNPH-201ENST00000381867 CNOT7Q9UIV1 285 aaKnown RBP14.88□□□□□ -0.03
SNPH-201ENST00000381867 SMARCA1P28370 1054 aa14.88□□□□□ -0.03
SNPH-201ENST00000381867 GFPT1Q06210 699 aaPredicted RBP14.88□□□□□ -0.03
SNPH-201ENST00000381867 KCNV1Q6PIU1 500 aa14.88□□□□□ -0.03
SNPH-201ENST00000381867 TTC13Q8NBP0 860 aa14.88□□□□□ -0.03
SNPH-201ENST00000381867 VPS39Q96JC1 886 aa14.88□□□□□ -0.03
SNPH-201ENST00000381867 MXD3Q9BW11 206 aa14.88□□□□□ -0.03
SNPH-201ENST00000381867 HOXD10P28358 340 aa14.88□□□□□ -0.03
SNPH-201ENST00000381867 EZH2Q15910 746 aaKnown RBP14.88□□□□□ -0.03
SNPH-201ENST00000381867 ZBTB41Q5SVQ8 909 aa14.88□□□□□ -0.03
SNPH-201ENST00000381867 NUDCD3Q8IVD9 361 aa14.88□□□□□ -0.03
SNPH-201ENST00000381867 ZBTB18Q99592 522 aa14.88□□□□□ -0.03
SNPH-201ENST00000381867 EPC1Q9H2F5 836 aa14.88□□□□□ -0.03
SNPH-201ENST00000381867 ESYT3A0FGR9 886 aa14.87□□□□□ -0.03
SNPH-201ENST00000381867 WDR64B1ANS9 1081 aa14.87□□□□□ -0.03
SNPH-201ENST00000381867 CHRNA3P32297 505 aa14.87□□□□□ -0.03
SNPH-201ENST00000381867 SLITRK6Q9H5Y7 841 aa14.87□□□□□ -0.03
SNPH-201ENST00000381867 ACAD9Q9H845 621 aa14.87□□□□□ -0.03
SNPH-201ENST00000381867 NXF1Q9UBU9 619 aaKnown RBP14.87□□□□□ -0.03
SNPH-201ENST00000381867 ANAPC7Q9UJX3 599 aa14.87□□□□□ -0.03
SNPH-201ENST00000381867 SPDYE2BA6NHP3 402 aa14.87□□□□□ -0.03
SNPH-201ENST00000381867 MEFVO15553 781 aaPredicted RBP14.87□□□□□ -0.03
SNPH-201ENST00000381867 SPDYE6P0CI01 402 aa14.87□□□□□ -0.03
SNPH-201ENST00000381867 PSMA2P25787 234 aa14.87□□□□□ -0.03
SNPH-201ENST00000381867 CYP2C19P33261 490 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms