RNA–Protein interactions for RNA: ENST00000381565.2

APOBEC3F-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3F, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-202ENST00000381565 CYP11B2P19099 503 aa12.81□□□□□ -0.36
APOBEC3F-202ENST00000381565 KCNA5P22460 613 aa12.81□□□□□ -0.36
APOBEC3F-202ENST00000381565 HOXA11P31270 313 aaPredicted RBP12.81□□□□□ -0.36
APOBEC3F-202ENST00000381565 CTNNB1P35222 781 aa12.81□□□□□ -0.36
APOBEC3F-202ENST00000381565 PHKA2P46019 1235 aa12.81□□□□□ -0.36
APOBEC3F-202ENST00000381565 MXD4Q14582 209 aaPredicted RBP12.81□□□□□ -0.36
APOBEC3F-202ENST00000381565 AMHR2Q16671 573 aa12.81□□□□□ -0.36
APOBEC3F-202ENST00000381565 CLLU1OSQ5K130 101 aa12.81□□□□□ -0.36
APOBEC3F-202ENST00000381565 MAEAQ7L5Y9 396 aa12.81□□□□□ -0.36
APOBEC3F-202ENST00000381565 CATSPER4Q7RTX7 472 aa12.81□□□□□ -0.36
APOBEC3F-202ENST00000381565 MCPH1Q8NEM0 835 aa12.81□□□□□ -0.36
APOBEC3F-202ENST00000381565 TRAIPQ9BWF2 469 aa12.81□□□□□ -0.36
APOBEC3F-202ENST00000381565 INO80BQ9C086 356 aaPredicted RBP12.81□□□□□ -0.36
APOBEC3F-202ENST00000381565 CHST12Q9NRB3 414 aa12.81□□□□□ -0.36
APOBEC3F-202ENST00000381565 LRFN2Q9ULH4 789 aa12.81□□□□□ -0.36
APOBEC3F-202ENST00000381565 PCDHB7Q9Y5E2 793 aa12.81□□□□□ -0.36
APOBEC3F-202ENST00000381565 C5orf42Q9H799 3197 aa12.81□□□□□ -0.36
APOBEC3F-202ENST00000381565 ARHGEF35A5YM69 484 aa12.8□□□□□ -0.36
APOBEC3F-202ENST00000381565 MEIS3P2A8K0S8 358 aa12.8□□□□□ -0.36
APOBEC3F-202ENST00000381565 H3BNC9 293 aa12.8□□□□□ -0.36
APOBEC3F-202ENST00000381565 TSPAN1O60635 241 aa12.8□□□□□ -0.36
APOBEC3F-202ENST00000381565 EYA4O95677 639 aa12.8□□□□□ -0.36
APOBEC3F-202ENST00000381565 POU5F1BQ06416 359 aa12.8□□□□□ -0.36
APOBEC3F-202ENST00000381565 TMEM119Q4V9L6 283 aa12.8□□□□□ -0.36
APOBEC3F-202ENST00000381565 UBXN11Q5T124 520 aa12.8□□□□□ -0.36
APOBEC3F-202ENST00000381565 KRT79Q5XKE5 535 aa12.8□□□□□ -0.36
APOBEC3F-202ENST00000381565 CDCA2Q69YH5 1023 aaPredicted RBP12.8□□□□□ -0.36
APOBEC3F-202ENST00000381565 DAW1Q8N136 415 aa12.8□□□□□ -0.36
APOBEC3F-202ENST00000381565 GJD3Q8N144 294 aa12.8□□□□□ -0.36
APOBEC3F-202ENST00000381565 PDCD7Q8N8D1 485 aaKnown RBP12.8□□□□□ -0.36
APOBEC3F-202ENST00000381565 CASD1Q96PB1 797 aa12.8□□□□□ -0.36
APOBEC3F-202ENST00000381565 RUSC1Q9BVN2 902 aa12.8□□□□□ -0.36
APOBEC3F-202ENST00000381565 NFKBIZQ9BYH8 718 aa12.8□□□□□ -0.36
APOBEC3F-202ENST00000381565 POLD4Q9HCU8 107 aa12.8□□□□□ -0.36
APOBEC3F-202ENST00000381565 DACT1Q9NYF0 836 aa12.8□□□□□ -0.36
APOBEC3F-202ENST00000381565 ANK1P16157 1881 aa12.8□□□□□ -0.36
APOBEC3F-202ENST00000381565 TBKBP1A7MCY6 615 aa12.79□□□□□ -0.36
APOBEC3F-202ENST00000381565 B4GALT5O43286 388 aa12.79□□□□□ -0.36
APOBEC3F-202ENST00000381565 BMP15O95972 392 aa12.79□□□□□ -0.36
APOBEC3F-202ENST00000381565 EDN1P05305 212 aa12.79□□□□□ -0.36
APOBEC3F-202ENST00000381565 BMPR1AP36894 532 aa12.79□□□□□ -0.36
APOBEC3F-202ENST00000381565 MAPK7Q13164 816 aa12.79□□□□□ -0.36
APOBEC3F-202ENST00000381565 GPM6BQ13491 265 aa12.79□□□□□ -0.36
APOBEC3F-202ENST00000381565 PKP1Q13835 747 aa12.79□□□□□ -0.36
APOBEC3F-202ENST00000381565 TFDP1Q14186 410 aa12.79□□□□□ -0.36
APOBEC3F-202ENST00000381565 COL19A1Q14993 1142 aa12.79□□□□□ -0.36
APOBEC3F-202ENST00000381565 TWF2Q6IBS0 349 aaKnown RBP12.79□□□□□ -0.36
APOBEC3F-202ENST00000381565 PTCRAQ6ISU1 281 aaPredicted RBP12.79□□□□□ -0.36
APOBEC3F-202ENST00000381565 LRRC55Q6ZSA7 311 aa12.79□□□□□ -0.36
APOBEC3F-202ENST00000381565 LPPQ93052 612 aa12.79□□□□□ -0.36
APOBEC3F-202ENST00000381565 AK8Q96MA6 479 aa12.79□□□□□ -0.36
APOBEC3F-202ENST00000381565 USP28Q96RU2 1077 aa12.79□□□□□ -0.36
APOBEC3F-202ENST00000381565 PLIN2Q99541 437 aa12.79□□□□□ -0.36
APOBEC3F-202ENST00000381565 CWH43Q9H720 699 aa12.79□□□□□ -0.36
APOBEC3F-202ENST00000381565 FAM105AQ9NUU6 356 aa12.79□□□□□ -0.36
APOBEC3F-202ENST00000381565 FBXO2Q9UK22 296 aaPredicted RBP12.79□□□□□ -0.36
APOBEC3F-202ENST00000381565 GRXCR2A6NFK2 248 aa12.78□□□□□ -0.36
APOBEC3F-202ENST00000381565 LRRIQ4A6NIV6 560 aa12.78□□□□□ -0.36
APOBEC3F-202ENST00000381565 PRR33A8MZF0 331 aa12.78□□□□□ -0.36
APOBEC3F-202ENST00000381565 INO80B-WBP1J3KQ70 363 aa12.78□□□□□ -0.36
APOBEC3F-202ENST00000381565 GRM6O15303 877 aa12.78□□□□□ -0.36
APOBEC3F-202ENST00000381565 ARF4P18085 180 aaPredicted RBP12.78□□□□□ -0.36
APOBEC3F-202ENST00000381565 CABP7Q86V35 215 aa12.78□□□□□ -0.36
APOBEC3F-202ENST00000381565 RNF169Q8NCN4 708 aa12.78□□□□□ -0.36
APOBEC3F-202ENST00000381565 HELQQ8TDG4 1101 aa12.78□□□□□ -0.36
APOBEC3F-202ENST00000381565 MRPL38Q96DV4 380 aaKnown RBP12.78□□□□□ -0.36
APOBEC3F-202ENST00000381565 CPB2Q96IY4 423 aa12.78□□□□□ -0.36
APOBEC3F-202ENST00000381565 KIFC3Q9BVG8 833 aa12.78□□□□□ -0.36
APOBEC3F-202ENST00000381565 EIF2AQ9BY44 585 aaKnown RBP12.78□□□□□ -0.36
APOBEC3F-202ENST00000381565 TMEM117Q9H0C3 514 aa12.78□□□□□ -0.36
APOBEC3F-202ENST00000381565 CCDC113Q9H0I3 377 aa12.78□□□□□ -0.36
APOBEC3F-202ENST00000381565 RWDD3Q9Y3V2 267 aa12.78□□□□□ -0.36
APOBEC3F-202ENST00000381565 H3BQ06 376 aaPredicted RBP12.77□□□□□ -0.37
APOBEC3F-202ENST00000381565 HOXA2O43364 376 aa12.77□□□□□ -0.37
APOBEC3F-202ENST00000381565 ZNF623O75123 536 aa12.77□□□□□ -0.37
APOBEC3F-202ENST00000381565 PPP1R37O75864 691 aa12.77□□□□□ -0.37
APOBEC3F-202ENST00000381565 ERLIN2O94905 339 aa12.77□□□□□ -0.37
APOBEC3F-202ENST00000381565 EOMESO95936 686 aa12.77□□□□□ -0.37
APOBEC3F-202ENST00000381565 ITGB1P05556 798 aa12.77□□□□□ -0.37
APOBEC3F-202ENST00000381565 RB1P06400 928 aa12.77□□□□□ -0.37
APOBEC3F-202ENST00000381565 DNAJB1P25685 340 aa12.77□□□□□ -0.37
APOBEC3F-202ENST00000381565 MARCKSP29966 332 aaPredicted RBP12.77□□□□□ -0.37
APOBEC3F-202ENST00000381565 LONP1P36776 959 aaKnown RBP12.77□□□□□ -0.37
APOBEC3F-202ENST00000381565 NAMPTP43490 491 aa12.77□□□□□ -0.37
APOBEC3F-202ENST00000381565 RAB27AP51159 221 aa12.77□□□□□ -0.37
APOBEC3F-202ENST00000381565 SLC12A3P55017 1021 aa12.77□□□□□ -0.37
APOBEC3F-202ENST00000381565 CEBPZQ03701 1054 aaKnown RBP12.77□□□□□ -0.37
APOBEC3F-202ENST00000381565 CAMK1Q14012 370 aa12.77□□□□□ -0.37
APOBEC3F-202ENST00000381565 PCBP1Q15365 356 aaKnown RBP eCLIP12.77□□□□□ -0.37
APOBEC3F-202ENST00000381565 ZRSR1Q15695 479 aaKnown RBP12.77□□□□□ -0.37
APOBEC3F-202ENST00000381565 LONRF3Q496Y0 759 aa12.77□□□□□ -0.37
APOBEC3F-202ENST00000381565 RINT1Q6NUQ1 792 aa12.77□□□□□ -0.37
APOBEC3F-202ENST00000381565 C1orf186Q6ZWK4 172 aa12.77□□□□□ -0.37
APOBEC3F-202ENST00000381565 USP49Q70CQ1 688 aa12.77□□□□□ -0.37
APOBEC3F-202ENST00000381565 LRRC43Q8N309 656 aa12.77□□□□□ -0.37
APOBEC3F-202ENST00000381565 COLGALT1Q8NBJ5 622 aa12.77□□□□□ -0.37
APOBEC3F-202ENST00000381565 SMG8Q8ND04 991 aaKnown RBP12.77□□□□□ -0.37
APOBEC3F-202ENST00000381565 P2RX5Q93086 422 aa12.77□□□□□ -0.37
APOBEC3F-202ENST00000381565 C11orf84Q9BUA3 381 aaPredicted RBP12.77□□□□□ -0.37
APOBEC3F-202ENST00000381565 PLVAPQ9BX97 442 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms