RNA–Protein interactions for RNA: ENST00000381431.9

SGCB-201, Transcript of sarcoglycan beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCB, Length 4,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-201ENST00000381431 GJD4Q96KN9 370 aaPredicted RBP18.31■□□□□ 0.52
SGCB-201ENST00000381431 ERGIC2Q96RQ1 377 aa18.31■□□□□ 0.52
SGCB-201ENST00000381431 POLR3FQ9H1D9 316 aaPredicted RBP18.31■□□□□ 0.52
SGCB-201ENST00000381431 RBAKQ9NYW8 714 aaPredicted RBP18.31■□□□□ 0.52
SGCB-201ENST00000381431 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.31■□□□□ 0.52
SGCB-201ENST00000381431 GPR75-ASB3A0A0A6YYF3 556 aa18.31■□□□□ 0.52
SGCB-201ENST00000381431 ZBTB22O15209 634 aa18.31■□□□□ 0.52
SGCB-201ENST00000381431 FGFR2P21802 821 aa18.31■□□□□ 0.52
SGCB-201ENST00000381431 GJB7Q6PEY0 223 aa18.31■□□□□ 0.52
SGCB-201ENST00000381431 CCDC68Q9H2F9 335 aa18.31■□□□□ 0.52
SGCB-201ENST00000381431 APEX2Q9UBZ4 518 aa18.31■□□□□ 0.52
SGCB-201ENST00000381431 TECPR2O15040 1411 aa18.3■□□□□ 0.52
SGCB-201ENST00000381431 A0A087X0T9 212 aa18.3■□□□□ 0.52
SGCB-201ENST00000381431 CASQ2O14958 399 aaPredicted RBP18.3■□□□□ 0.52
SGCB-201ENST00000381431 FAM228BP0C875 321 aa18.3■□□□□ 0.52
SGCB-201ENST00000381431 ARL4CP56559 192 aa18.3■□□□□ 0.52
SGCB-201ENST00000381431 RNASELQ05823 741 aaKnown RBP18.3■□□□□ 0.52
SGCB-201ENST00000381431 EPM2AIP1Q7L775 607 aaPredicted RBP18.3■□□□□ 0.52
SGCB-201ENST00000381431 CATSPER4Q7RTX7 472 aa18.3■□□□□ 0.52
SGCB-201ENST00000381431 STK33Q9BYT3 514 aa18.3■□□□□ 0.52
SGCB-201ENST00000381431 FAM187AA6NFU0 413 aa18.3■□□□□ 0.52
SGCB-201ENST00000381431 YWHABP31946 246 aaKnown RBP18.3■□□□□ 0.52
SGCB-201ENST00000381431 SFNP31947 248 aa18.3■□□□□ 0.52
SGCB-201ENST00000381431 ANKS1AQ92625 1134 aa18.3■□□□□ 0.52
SGCB-201ENST00000381431 GGT7Q9UJ14 662 aa18.3■□□□□ 0.52
SGCB-201ENST00000381431 ACOT2P49753 483 aa18.3■□□□□ 0.52
SGCB-201ENST00000381431 EDRF1Q3B7T1 1238 aa18.3■□□□□ 0.52
SGCB-201ENST00000381431 KLHL11Q9NVR0 708 aa18.3■□□□□ 0.52
SGCB-201ENST00000381431 AGO2Q9UKV8 859 aaKnown RBP18.3■□□□□ 0.52
SGCB-201ENST00000381431 SUGT1Q9Y2Z0 365 aa18.3■□□□□ 0.52
SGCB-201ENST00000381431 FAM205AQ6ZU69 1335 aa18.3■□□□□ 0.52
SGCB-201ENST00000381431 RAD51CO43502 376 aa18.29■□□□□ 0.52
SGCB-201ENST00000381431 DBN1Q16643 649 aa18.29■□□□□ 0.52
SGCB-201ENST00000381431 RHPN2Q8IUC4 686 aa18.29■□□□□ 0.52
SGCB-201ENST00000381431 EXOC8Q8IYI6 725 aa18.29■□□□□ 0.52
SGCB-201ENST00000381431 CELF4Q9BZC1 486 aaKnown RBP18.29■□□□□ 0.52
SGCB-201ENST00000381431 NYAP2Q9P242 653 aa18.29■□□□□ 0.52
SGCB-201ENST00000381431 HPCAL4Q9UM19 191 aa18.29■□□□□ 0.52
SGCB-201ENST00000381431 UBE4BO95155 1302 aa18.29■□□□□ 0.52
SGCB-201ENST00000381431 MAPK13O15264 365 aa18.29■□□□□ 0.52
SGCB-201ENST00000381431 PLA2G4AP47712 749 aa18.29■□□□□ 0.52
SGCB-201ENST00000381431 KCNJ1P48048 391 aa18.29■□□□□ 0.52
SGCB-201ENST00000381431 PSMC1P62191 440 aaKnown RBP18.29■□□□□ 0.52
SGCB-201ENST00000381431 TMPRSS15P98073 1019 aa18.29■□□□□ 0.52
SGCB-201ENST00000381431 TRIM42Q8IWZ5 723 aa18.29■□□□□ 0.52
SGCB-201ENST00000381431 HIPK4Q8NE63 616 aa18.29■□□□□ 0.52
SGCB-201ENST00000381431 HVCN1Q96D96 273 aa18.29■□□□□ 0.52
SGCB-201ENST00000381431 HOXC10Q9NYD6 342 aa18.29■□□□□ 0.52
SGCB-201ENST00000381431 HSPBP1Q9NZL4 362 aa18.29■□□□□ 0.52
SGCB-201ENST00000381431 SPDYE16A6NNV3 312 aaPredicted RBP18.29■□□□□ 0.52
SGCB-201ENST00000381431 F5H423 210 aaPredicted RBP18.29■□□□□ 0.52
SGCB-201ENST00000381431 TAF11Q15544 211 aa18.29■□□□□ 0.52
SGCB-201ENST00000381431 SPDYE2Q495Y8 402 aa18.29■□□□□ 0.52
SGCB-201ENST00000381431 SPOUT1Q5T280 376 aaKnown RBP18.29■□□□□ 0.52
SGCB-201ENST00000381431 C4orf50Q6ZRC1 276 aa18.29■□□□□ 0.52
SGCB-201ENST00000381431 RHOT1Q8IXI2 618 aa18.29■□□□□ 0.52
SGCB-201ENST00000381431 SIX6OS1Q8N1H7 587 aa18.29■□□□□ 0.52
SGCB-201ENST00000381431 HDAC11Q96DB2 347 aa18.29■□□□□ 0.52
SGCB-201ENST00000381431 CRAMP1Q96RY5 1269 aa18.29■□□□□ 0.52
SGCB-201ENST00000381431 WNT8AQ9H1J5 351 aa18.29■□□□□ 0.52
SGCB-201ENST00000381431 TUFT1Q9NNX1 390 aa18.29■□□□□ 0.52
SGCB-201ENST00000381431 ZNF302Q9NR11 478 aa18.29■□□□□ 0.52
SGCB-201ENST00000381431 TLK1Q9UKI8 766 aa18.29■□□□□ 0.52
SGCB-201ENST00000381431 CAPN6Q9Y6Q1 641 aa18.29■□□□□ 0.52
SGCB-201ENST00000381431 KIAA1210Q9ULL0 1709 aa18.29■□□□□ 0.52
SGCB-201ENST00000381431 MYO3BQ8WXR4 1341 aa18.29■□□□□ 0.52
SGCB-201ENST00000381431 SLC4A1P02730 911 aa18.29■□□□□ 0.52
SGCB-201ENST00000381431 HMGCS2P54868 508 aa18.29■□□□□ 0.52
SGCB-201ENST00000381431 NAB2Q15742 525 aa18.29■□□□□ 0.52
SGCB-201ENST00000381431 PKN1Q16512 942 aa18.29■□□□□ 0.52
SGCB-201ENST00000381431 CATSPER3Q86XQ3 398 aa18.29■□□□□ 0.52
SGCB-201ENST00000381431 GSDMBQ8TAX9 411 aa18.29■□□□□ 0.52
SGCB-201ENST00000381431 CHMP6Q96FZ7 201 aa18.29■□□□□ 0.52
SGCB-201ENST00000381431 MTRQ99707 1265 aa18.29■□□□□ 0.52
SGCB-201ENST00000381431 PIM2Q9P1W9 311 aa18.29■□□□□ 0.52
SGCB-201ENST00000381431 SPATA31A1Q5TZJ5 1347 aa18.28■□□□□ 0.52
SGCB-201ENST00000381431 KRT37O76014 449 aa18.28■□□□□ 0.52
SGCB-201ENST00000381431 RPA1P27694 616 aa18.28■□□□□ 0.52
SGCB-201ENST00000381431 KIAA1755Q5JYT7 1200 aa18.28■□□□□ 0.52
SGCB-201ENST00000381431 TTI2Q6NXR4 508 aa18.28■□□□□ 0.52
SGCB-201ENST00000381431 ELOA2Q8IYF1 753 aaPredicted RBP18.28■□□□□ 0.52
SGCB-201ENST00000381431 PPM1NQ8N819 430 aa18.28■□□□□ 0.52
SGCB-201ENST00000381431 PPARGC1AQ9UBK2 798 aaKnown RBP18.28■□□□□ 0.52
SGCB-201ENST00000381431 MEGF6O75095 1541 aa18.28■□□□□ 0.52
SGCB-201ENST00000381431 IQANK1A0A1B0GTG1 560 aa18.28■□□□□ 0.52
SGCB-201ENST00000381431 NCF2P19878 526 aaPredicted RBP18.28■□□□□ 0.52
SGCB-201ENST00000381431 SEC24CP53992 1094 aa18.28■□□□□ 0.52
SGCB-201ENST00000381431 BAATQ14032 418 aaPredicted RBP18.28■□□□□ 0.52
SGCB-201ENST00000381431 ZBED8Q8IZ13 594 aa18.28■□□□□ 0.52
SGCB-201ENST00000381431 C9orf72Q96LT7 481 aa18.28■□□□□ 0.52
SGCB-201ENST00000381431 OSBPP22059 807 aa18.28■□□□□ 0.52
SGCB-201ENST00000381431 COPB2P35606 906 aa18.28■□□□□ 0.52
SGCB-201ENST00000381431 GRB10Q13322 594 aa18.28■□□□□ 0.52
SGCB-201ENST00000381431 EPC2Q52LR7 807 aa18.28■□□□□ 0.52
SGCB-201ENST00000381431 IZUMO3Q5VZ72 239 aa18.28■□□□□ 0.52
SGCB-201ENST00000381431 FAM193BQ96PV7 902 aaPredicted RBP18.28■□□□□ 0.52
SGCB-201ENST00000381431 FUT8Q9BYC5 575 aa18.28■□□□□ 0.52
SGCB-201ENST00000381431 VIPAS39Q9H9C1 493 aa18.28■□□□□ 0.52
SGCB-201ENST00000381431 PFASO15067 1338 aa18.27■□□□□ 0.52
SGCB-201ENST00000381431 PXDNQ92626 1479 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms