RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 TAP1Q03518 808 aa21.37■■□□□ 1.01
GTF3A-201ENST00000381140 PRPF4BQ13523 1007 aaKnown RBP21.37■■□□□ 1.01
GTF3A-201ENST00000381140 GIT2Q14161 759 aa21.37■■□□□ 1.01
GTF3A-201ENST00000381140 BTG3Q14201 252 aaPredicted RBP21.37■■□□□ 1.01
GTF3A-201ENST00000381140 AMHR2Q16671 573 aa21.37■■□□□ 1.01
GTF3A-201ENST00000381140 NOTUMQ6P988 496 aa21.37■■□□□ 1.01
GTF3A-201ENST00000381140 MYCT1Q8N699 235 aa21.37■■□□□ 1.01
GTF3A-201ENST00000381140 FAM105AQ9NUU6 356 aa21.37■■□□□ 1.01
GTF3A-201ENST00000381140 ODF2LQ9ULJ1 636 aa21.37■■□□□ 1.01
GTF3A-201ENST00000381140 COL4A6Q14031 1691 aa21.37■■□□□ 1.01
GTF3A-201ENST00000381140 TMEM265A0A087WTH1 108 aa21.36■■□□□ 1.01
GTF3A-201ENST00000381140 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.36■■□□□ 1.01
GTF3A-201ENST00000381140 A0A0U1RQF3 1178 aa21.36■■□□□ 1.01
GTF3A-201ENST00000381140 K7ERI5 159 aa21.36■■□□□ 1.01
GTF3A-201ENST00000381140 AXLP30530 894 aa21.36■■□□□ 1.01
GTF3A-201ENST00000381140 PCBP1Q15365 356 aaKnown RBP eCLIP21.36■■□□□ 1.01
GTF3A-201ENST00000381140 CRIPAKQ8N1N5 446 aa21.36■■□□□ 1.01
GTF3A-201ENST00000381140 IQUBQ8NA54 791 aa21.36■■□□□ 1.01
GTF3A-201ENST00000381140 LPPQ93052 612 aa21.36■■□□□ 1.01
GTF3A-201ENST00000381140 CCDC113Q9H0I3 377 aa21.36■■□□□ 1.01
GTF3A-201ENST00000381140 FZD8Q9H461 694 aa21.36■■□□□ 1.01
GTF3A-201ENST00000381140 C17orf75Q9HAS0 396 aa21.36■■□□□ 1.01
GTF3A-201ENST00000381140 LARSQ9P2J5 1176 aaKnown RBP21.36■■□□□ 1.01
GTF3A-201ENST00000381140 PCDHB2Q9Y5E7 798 aa21.36■■□□□ 1.01
GTF3A-201ENST00000381140 A0A1B0GVL5 298 aa21.36■■□□□ 1.01
GTF3A-201ENST00000381140 MYMKA6NI61 221 aa21.36■■□□□ 1.01
GTF3A-201ENST00000381140 TTLL13PA6NNM8 815 aa21.36■■□□□ 1.01
GTF3A-201ENST00000381140 TBKBP1A7MCY6 615 aa21.36■■□□□ 1.01
GTF3A-201ENST00000381140 GOLGA6L22H0YM25 854 aa21.36■■□□□ 1.01
GTF3A-201ENST00000381140 RAB27AP51159 221 aa21.36■■□□□ 1.01
GTF3A-201ENST00000381140 SMTNP53814 917 aa21.36■■□□□ 1.01
GTF3A-201ENST00000381140 GRIN2CQ14957 1233 aa21.36■■□□□ 1.01
GTF3A-201ENST00000381140 E2F4Q16254 413 aa21.36■■□□□ 1.01
GTF3A-201ENST00000381140 UBXN11Q5T124 520 aa21.36■■□□□ 1.01
GTF3A-201ENST00000381140 ADALQ6DHV7 355 aa21.36■■□□□ 1.01
GTF3A-201ENST00000381140 PPP4R3CPQ6ZMV5 832 aa21.36■■□□□ 1.01
GTF3A-201ENST00000381140 ABI1Q8IZP0 508 aa21.36■■□□□ 1.01
GTF3A-201ENST00000381140 FIBCD1Q8N539 461 aa21.36■■□□□ 1.01
GTF3A-201ENST00000381140 ARNTL2Q8WYA1 636 aa21.36■■□□□ 1.01
GTF3A-201ENST00000381140 DDX12PQ92771 950 aa21.36■■□□□ 1.01
GTF3A-201ENST00000381140 EIF2AQ9BY44 585 aaKnown RBP21.36■■□□□ 1.01
GTF3A-201ENST00000381140 PRDM12Q9H4Q4 367 aa21.36■■□□□ 1.01
GTF3A-201ENST00000381140 ELAC1Q9H777 363 aaKnown RBP21.36■■□□□ 1.01
GTF3A-201ENST00000381140 PARVGQ9HBI0 331 aa21.36■■□□□ 1.01
GTF3A-201ENST00000381140 KCNH3Q9ULD8 1083 aa21.36■■□□□ 1.01
GTF3A-201ENST00000381140 COL4A4P53420 1690 aaPredicted RBP21.35■■□□□ 1.01
GTF3A-201ENST00000381140 NPTXRO95502 500 aa21.35■■□□□ 1.01
GTF3A-201ENST00000381140 SKIP12755 728 aa21.35■■□□□ 1.01
GTF3A-201ENST00000381140 IDEP14735 1019 aa21.35■■□□□ 1.01
GTF3A-201ENST00000381140 ATF7P17544 494 aaPredicted RBP21.35■■□□□ 1.01
GTF3A-201ENST00000381140 PTMSP20962 102 aa21.35■■□□□ 1.01
GTF3A-201ENST00000381140 SP7Q8TDD2 431 aaPredicted RBP21.35■■□□□ 1.01
GTF3A-201ENST00000381140 ZNF689Q96CS4 500 aaPredicted RBP21.35■■□□□ 1.01
GTF3A-201ENST00000381140 PRIMPOLQ96LW4 560 aa21.35■■□□□ 1.01
GTF3A-201ENST00000381140 APOL6Q9BWW8 343 aa21.35■■□□□ 1.01
GTF3A-201ENST00000381140 TRIM6Q9C030 488 aaPredicted RBP21.35■■□□□ 1.01
GTF3A-201ENST00000381140 PHLPP2Q6ZVD8 1323 aa21.34■■□□□ 1.01
GTF3A-201ENST00000381140 CNTNAP2Q9UHC6 1331 aa21.34■■□□□ 1.01
GTF3A-201ENST00000381140 K7ENM7 598 aa21.34■■□□□ 1.01
GTF3A-201ENST00000381140 ACKR2O00590 384 aa21.34■■□□□ 1.01
GTF3A-201ENST00000381140 EDN1P05305 212 aa21.34■■□□□ 1.01
GTF3A-201ENST00000381140 PFKFB1P16118 471 aa21.34■■□□□ 1.01
GTF3A-201ENST00000381140 CMA1P23946 247 aa21.34■■□□□ 1.01
GTF3A-201ENST00000381140 FAM187BQ17R55 369 aa21.34■■□□□ 1.01
GTF3A-201ENST00000381140 ZNF598Q86UK7 904 aaKnown RBP21.34■■□□□ 1.01
GTF3A-201ENST00000381140 CMTR2Q8IYT2 770 aaKnown RBP21.34■■□□□ 1.01
GTF3A-201ENST00000381140 HELQQ8TDG4 1101 aa21.34■■□□□ 1.01
GTF3A-201ENST00000381140 SPIRE2Q8WWL2 714 aa21.34■■□□□ 1.01
GTF3A-201ENST00000381140 CCDC51Q96ER9 411 aa21.34■■□□□ 1.01
GTF3A-201ENST00000381140 TGS1Q96RS0 853 aaKnown RBP21.34■■□□□ 1.01
GTF3A-201ENST00000381140 C17orf80Q9BSJ5 609 aa21.34■■□□□ 1.01
GTF3A-201ENST00000381140 CUEDC2Q9H467 287 aa21.34■■□□□ 1.01
GTF3A-201ENST00000381140 RC3H2Q9HBD1 1191 aaKnown RBP21.34■■□□□ 1.01
GTF3A-201ENST00000381140 RNF19AQ9NV58 838 aa21.34■■□□□ 1.01
GTF3A-201ENST00000381140 MTMR10Q9NXD2 777 aa21.34■■□□□ 1.01
GTF3A-201ENST00000381140 ARHGAP28Q9P2N2 729 aa21.34■■□□□ 1.01
GTF3A-201ENST00000381140 TDRD15B5MCY1 1934 aaKnown RBP21.34■■□□□ 1.01
GTF3A-201ENST00000381140 TRIP11Q15643 1979 aa21.33■■□□□ 1
GTF3A-201ENST00000381140 MEIS3P2A8K0S8 358 aa21.33■■□□□ 1
GTF3A-201ENST00000381140 HOXA2O43364 376 aa21.33■■□□□ 1
GTF3A-201ENST00000381140 EOMESO95936 686 aa21.33■■□□□ 1
GTF3A-201ENST00000381140 STRN3Q13033 797 aa21.33■■□□□ 1
GTF3A-201ENST00000381140 CLLU1OSQ5K130 101 aa21.33■■□□□ 1
GTF3A-201ENST00000381140 SPOUT1Q5T280 376 aaKnown RBP21.33■■□□□ 1
GTF3A-201ENST00000381140 SLC27A1Q6PCB7 646 aa21.33■■□□□ 1
GTF3A-201ENST00000381140 SFR1Q86XK3 245 aa21.33■■□□□ 1
GTF3A-201ENST00000381140 FSIP1Q8NA03 581 aa21.33■■□□□ 1
GTF3A-201ENST00000381140 TMEM87AQ8NBN3 555 aa21.33■■□□□ 1
GTF3A-201ENST00000381140 TRAIPQ9BWF2 469 aa21.33■■□□□ 1
GTF3A-201ENST00000381140 KCNG1Q9UIX4 513 aa21.33■■□□□ 1
GTF3A-201ENST00000381140 INPP5FQ9Y2H2 1132 aa21.33■■□□□ 1
GTF3A-201ENST00000381140 HES2Q9Y543 173 aa21.33■■□□□ 1
GTF3A-201ENST00000381140 MRPL42Q9Y6G3 142 aaKnown RBP21.33■■□□□ 1
GTF3A-201ENST00000381140 CHD9Q3L8U1 2897 aa21.32■■□□□ 1
GTF3A-201ENST00000381140 RFXAPO00287 272 aa21.32■■□□□ 1
GTF3A-201ENST00000381140 N4BP3O15049 544 aa21.32■■□□□ 1
GTF3A-201ENST00000381140 TRAK2O60296 914 aa21.32■■□□□ 1
GTF3A-201ENST00000381140 ZNF131P52739 623 aa21.32■■□□□ 1
GTF3A-201ENST00000381140 NT5DC1Q5TFE4 455 aa21.32■■□□□ 1
GTF3A-201ENST00000381140 EEF1DP3Q658K8 133 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms