RNA–Protein interactions for RNA: ENST00000380741.8

SMN2-201, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-201ENST00000380741 FERMT3Q86UX7 667 aa18.82■□□□□ 0.6
SMN2-201ENST00000380741 ZNF280BQ86YH2 543 aa18.82■□□□□ 0.6
SMN2-201ENST00000380741 RNF149Q8NC42 400 aa18.82■□□□□ 0.6
SMN2-201ENST00000380741 TCP11Q8WWU5 503 aa18.82■□□□□ 0.6
SMN2-201ENST00000380741 PBXIP1Q96AQ6 731 aa18.82■□□□□ 0.6
SMN2-201ENST00000380741 VN1R3Q9BXE9 311 aa18.82■□□□□ 0.6
SMN2-201ENST00000380741 ADAM7Q9H2U9 754 aa18.82■□□□□ 0.6
SMN2-201ENST00000380741 BRMS1Q9HCU9 246 aa18.82■□□□□ 0.6
SMN2-201ENST00000380741 IRAK3Q9Y616 596 aa18.82■□□□□ 0.6
SMN2-201ENST00000380741 KMT2EQ8IZD2 1858 aa18.82■□□□□ 0.6
SMN2-201ENST00000380741 SLITRK3O94933 977 aa18.81■□□□□ 0.6
SMN2-201ENST00000380741 AFF1P51825 1210 aaKnown RBP18.81■□□□□ 0.6
SMN2-201ENST00000380741 NHLH1Q02575 133 aa18.81■□□□□ 0.6
SMN2-201ENST00000380741 ITIH3Q06033 890 aa18.81■□□□□ 0.6
SMN2-201ENST00000380741 UBXN11Q5T124 520 aa18.81■□□□□ 0.6
SMN2-201ENST00000380741 CES5AQ6NT32 575 aa18.81■□□□□ 0.6
SMN2-201ENST00000380741 MRPL10Q7Z7H8 261 aaKnown RBP18.81■□□□□ 0.6
SMN2-201ENST00000380741 TPH2Q8IWU9 490 aa18.81■□□□□ 0.6
SMN2-201ENST00000380741 URGCPQ8TCY9 931 aa18.81■□□□□ 0.6
SMN2-201ENST00000380741 MTRQ99707 1265 aa18.81■□□□□ 0.6
SMN2-201ENST00000380741 POMKQ9H5K3 350 aa18.81■□□□□ 0.6
SMN2-201ENST00000380741 RSAD1Q9HA92 442 aa18.81■□□□□ 0.6
SMN2-201ENST00000380741 XPNPEP1Q9NQW7 623 aa18.81■□□□□ 0.6
SMN2-201ENST00000380741 TSHZ2Q9NRE2 1034 aa18.81■□□□□ 0.6
SMN2-201ENST00000380741 MYO10Q9HD67 2058 aa18.8■□□□□ 0.6
SMN2-201ENST00000380741 ASAP2O43150 1006 aa18.8■□□□□ 0.6
SMN2-201ENST00000380741 DDHD2O94830 711 aa18.8■□□□□ 0.6
SMN2-201ENST00000380741 EPCAMP16422 314 aa18.8■□□□□ 0.6
SMN2-201ENST00000380741 SIGLEC14Q08ET2 396 aa18.8■□□□□ 0.6
SMN2-201ENST00000380741 GIT2Q14161 759 aa18.8■□□□□ 0.6
SMN2-201ENST00000380741 CALCRLQ16602 461 aa18.8■□□□□ 0.6
SMN2-201ENST00000380741 PTPN21Q16825 1174 aa18.8■□□□□ 0.6
SMN2-201ENST00000380741 ALYREFQ86V81 257 aaKnown RBP18.8■□□□□ 0.6
SMN2-201ENST00000380741 C12orf76Q8N812 135 aaPredicted RBP18.8■□□□□ 0.6
SMN2-201ENST00000380741 TMEM87AQ8NBN3 555 aa18.8■□□□□ 0.6
SMN2-201ENST00000380741 NSUN7Q8NE18 718 aaKnown RBP18.8■□□□□ 0.6
SMN2-201ENST00000380741 NECTIN4Q96NY8 510 aa18.8■□□□□ 0.6
SMN2-201ENST00000380741 EIF2AK1Q9BQI3 630 aaKnown RBP18.8■□□□□ 0.6
SMN2-201ENST00000380741 CNTNAP2Q9UHC6 1331 aa18.79■□□□□ 0.6
SMN2-201ENST00000380741 BTBD18B2RXH4 712 aa18.79■□□□□ 0.6
SMN2-201ENST00000380741 WNT7AO00755 349 aa18.79■□□□□ 0.6
SMN2-201ENST00000380741 JAK2O60674 1132 aa18.79■□□□□ 0.6
SMN2-201ENST00000380741 ERLIN2O94905 339 aa18.79■□□□□ 0.6
SMN2-201ENST00000380741 WEE2P0C1S8 567 aa18.79■□□□□ 0.6
SMN2-201ENST00000380741 FOSBP53539 338 aa18.79■□□□□ 0.6
SMN2-201ENST00000380741 PTPN14Q15678 1187 aa18.79■□□□□ 0.6
SMN2-201ENST00000380741 RARS2Q5T160 578 aaKnown RBP18.79■□□□□ 0.6
SMN2-201ENST00000380741 HSD17B14Q9BPX1 270 aa18.79■□□□□ 0.6
SMN2-201ENST00000380741 DZANK1Q9NVP4 752 aa18.79■□□□□ 0.6
SMN2-201ENST00000380741 PCDHA12Q9UN75 941 aa18.79■□□□□ 0.6
SMN2-201ENST00000380741 NR2E1Q9Y466 385 aa18.79■□□□□ 0.6
SMN2-201ENST00000380741 TDRD15B5MCY1 1934 aaKnown RBP18.78■□□□□ 0.6
SMN2-201ENST00000380741 DENND4AQ7Z401 1863 aa18.78■□□□□ 0.6
SMN2-201ENST00000380741 C2CD4DB7Z1M9 353 aa18.78■□□□□ 0.6
SMN2-201ENST00000380741 TSPAN1O60635 241 aa18.78■□□□□ 0.6
SMN2-201ENST00000380741 LYPLA2O95372 231 aa18.78■□□□□ 0.6
SMN2-201ENST00000380741 POMCP01189 267 aa18.78■□□□□ 0.6
SMN2-201ENST00000380741 NCLP19338 710 aaKnown RBP18.78■□□□□ 0.6
SMN2-201ENST00000380741 PTENP60484 403 aa18.78■□□□□ 0.6
SMN2-201ENST00000380741 MXD4Q14582 209 aaPredicted RBP18.78■□□□□ 0.6
SMN2-201ENST00000380741 KANK3Q6NY19 840 aa18.78■□□□□ 0.6
SMN2-201ENST00000380741 ZBTB33Q86T24 672 aa18.78■□□□□ 0.6
SMN2-201ENST00000380741 SUGP1Q8IWZ8 645 aaKnown RBP18.78■□□□□ 0.6
SMN2-201ENST00000380741 DIS3L2Q8IYB7 885 aaKnown RBP18.78■□□□□ 0.6
SMN2-201ENST00000380741 SMG8Q8ND04 991 aaKnown RBP18.78■□□□□ 0.6
SMN2-201ENST00000380741 SLC22A17Q8WUG5 538 aa18.78■□□□□ 0.6
SMN2-201ENST00000380741 ASIC4Q96FT7 647 aa18.78■□□□□ 0.6
SMN2-201ENST00000380741 FAM193BQ96PV7 902 aaPredicted RBP18.78■□□□□ 0.6
SMN2-201ENST00000380741 TTC12Q9H892 705 aaPredicted RBP18.78■□□□□ 0.6
SMN2-201ENST00000380741 KANSL3Q9P2N6 904 aa18.78■□□□□ 0.6
SMN2-201ENST00000380741 NEMFO60524 1076 aa18.77■□□□□ 0.6
SMN2-201ENST00000380741 TXKP42681 527 aa18.77■□□□□ 0.6
SMN2-201ENST00000380741 MTHFRP42898 656 aa18.77■□□□□ 0.6
SMN2-201ENST00000380741 PCBP1Q15365 356 aaKnown RBP eCLIP18.77■□□□□ 0.6
SMN2-201ENST00000380741 IER5LQ5T953 404 aa18.77■□□□□ 0.6
SMN2-201ENST00000380741 FBXL6Q8N531 539 aa18.77■□□□□ 0.6
SMN2-201ENST00000380741 ASAP3Q8TDY4 903 aa18.77■□□□□ 0.6
SMN2-201ENST00000380741 CPB2Q96IY4 423 aa18.77■□□□□ 0.6
SMN2-201ENST00000380741 RIPOR3Q96MK2 946 aa18.77■□□□□ 0.6
SMN2-201ENST00000380741 TMEM175Q9BSA9 504 aa18.77■□□□□ 0.6
SMN2-201ENST00000380741 EIF2AQ9BY44 585 aaKnown RBP18.77■□□□□ 0.6
SMN2-201ENST00000380741 ANKEF1Q9NU02 776 aa18.77■□□□□ 0.6
SMN2-201ENST00000380741 PPP4R2Q9NY27 417 aa18.77■□□□□ 0.6
SMN2-201ENST00000380741 IPPQ9Y573 584 aa18.77■□□□□ 0.6
SMN2-201ENST00000380741 C2orf16Q68DN1 1984 aa18.76■□□□□ 0.59
SMN2-201ENST00000380741 INO80B-WBP1J3KQ70 363 aa18.76■□□□□ 0.59
SMN2-201ENST00000380741 NRP1O14786 923 aa18.76■□□□□ 0.59
SMN2-201ENST00000380741 DGAT1O75907 488 aa18.76■□□□□ 0.59
SMN2-201ENST00000380741 ALDH2P05091 517 aa18.76■□□□□ 0.59
SMN2-201ENST00000380741 SSBP05455 408 aaKnown RBP eCLIP18.76■□□□□ 0.59
SMN2-201ENST00000380741 ITGA4P13612 1032 aa18.76■□□□□ 0.59
SMN2-201ENST00000380741 AXLP30530 894 aa18.76■□□□□ 0.59
SMN2-201ENST00000380741 NEK4P51957 841 aa18.76■□□□□ 0.59
SMN2-201ENST00000380741 MAPK8IP2Q13387 824 aaPredicted RBP18.76■□□□□ 0.59
SMN2-201ENST00000380741 CAPSQ13938 189 aa18.76■□□□□ 0.59
SMN2-201ENST00000380741 TFDP1Q14186 410 aa18.76■□□□□ 0.59
SMN2-201ENST00000380741 KIAA1841Q6NSI8 718 aa18.76■□□□□ 0.59
SMN2-201ENST00000380741 NOTUMQ6P988 496 aa18.76■□□□□ 0.59
SMN2-201ENST00000380741 IFNLR1Q8IU57 520 aaPredicted RBP18.76■□□□□ 0.59
SMN2-201ENST00000380741 CNNM3Q8NE01 707 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms