RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 TRIM49CP0CI26 452 aa17.08■□□□□ 0.32
COL2A1-202ENST00000380518 SMARCA1P28370 1054 aa17.08■□□□□ 0.32
COL2A1-202ENST00000380518 CCDC137Q6PK04 289 aaKnown RBP17.08■□□□□ 0.32
COL2A1-202ENST00000380518 PPM1NQ8N819 430 aa17.08■□□□□ 0.32
COL2A1-202ENST00000380518 ATP6V1G3Q96LB4 118 aa17.08■□□□□ 0.32
COL2A1-202ENST00000380518 SUDS3Q9H7L9 328 aaPredicted RBP17.08■□□□□ 0.32
COL2A1-202ENST00000380518 ZFP69BQ9UJL9 534 aa17.08■□□□□ 0.32
COL2A1-202ENST00000380518 TARSL2A2RTX5 802 aaKnown RBP17.08■□□□□ 0.32
COL2A1-202ENST00000380518 DHX34Q14147 1143 aaKnown RBP17.08■□□□□ 0.32
COL2A1-202ENST00000380518 KIF19Q2TAC6 998 aa17.08■□□□□ 0.32
COL2A1-202ENST00000380518 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.08■□□□□ 0.32
COL2A1-202ENST00000380518 HIPK4Q8NE63 616 aa17.08■□□□□ 0.32
COL2A1-202ENST00000380518 SPATA4Q8NEY3 305 aa17.08■□□□□ 0.32
COL2A1-202ENST00000380518 COG1Q8WTW3 980 aa17.08■□□□□ 0.32
COL2A1-202ENST00000380518 FSD1LQ9BXM9 530 aa17.08■□□□□ 0.32
COL2A1-202ENST00000380518 MRPL4Q9BYD3 311 aaKnown RBP17.08■□□□□ 0.32
COL2A1-202ENST00000380518 TRIM9Q9C026 710 aa17.08■□□□□ 0.32
COL2A1-202ENST00000380518 DDX56Q9NY93 547 aaKnown RBP17.08■□□□□ 0.32
COL2A1-202ENST00000380518 M0QYV0 167 aa17.07■□□□□ 0.32
COL2A1-202ENST00000380518 HAUS5O94927 633 aa17.07■□□□□ 0.32
COL2A1-202ENST00000380518 EYA4O95677 639 aa17.07■□□□□ 0.32
COL2A1-202ENST00000380518 BCAR1P56945 870 aa17.07■□□□□ 0.32
COL2A1-202ENST00000380518 GPS1Q13098 491 aa17.07■□□□□ 0.32
COL2A1-202ENST00000380518 C12orf60Q5U649 245 aa17.07■□□□□ 0.32
COL2A1-202ENST00000380518 SAAL1Q96ER3 474 aa17.07■□□□□ 0.32
COL2A1-202ENST00000380518 SLC9A2Q9UBY0 812 aa17.07■□□□□ 0.32
COL2A1-202ENST00000380518 EMSYQ7Z589 1322 aa17.07■□□□□ 0.32
COL2A1-202ENST00000380518 COPS2P61201 443 aa17.07■□□□□ 0.32
COL2A1-202ENST00000380518 ANKRD40Q6AI12 368 aa17.07■□□□□ 0.32
COL2A1-202ENST00000380518 LRRC31Q6UY01 552 aa17.07■□□□□ 0.32
COL2A1-202ENST00000380518 HAUS6Q7Z4H7 955 aa17.07■□□□□ 0.32
COL2A1-202ENST00000380518 CDC26Q8NHZ8 85 aa17.07■□□□□ 0.32
COL2A1-202ENST00000380518 STOML1Q9UBI4 398 aa17.07■□□□□ 0.32
COL2A1-202ENST00000380518 ANKRD65E5RJM6 399 aa17.07■□□□□ 0.32
COL2A1-202ENST00000380518 PI4K2BG5E9Z4 385 aa17.07■□□□□ 0.32
COL2A1-202ENST00000380518 ATP1A1P05023 1023 aaKnown RBP17.07■□□□□ 0.32
COL2A1-202ENST00000380518 KCNJ6P48051 423 aa17.07■□□□□ 0.32
COL2A1-202ENST00000380518 SPP2Q13103 211 aa17.07■□□□□ 0.32
COL2A1-202ENST00000380518 E2F4Q16254 413 aa17.07■□□□□ 0.32
COL2A1-202ENST00000380518 TWF2Q6IBS0 349 aaKnown RBP17.07■□□□□ 0.32
COL2A1-202ENST00000380518 TRMT10CQ7L0Y3 403 aaKnown RBP17.07■□□□□ 0.32
COL2A1-202ENST00000380518 SRBD1Q8N5C6 995 aaKnown RBP17.07■□□□□ 0.32
COL2A1-202ENST00000380518 ATP11CQ8NB49 1132 aa17.07■□□□□ 0.32
COL2A1-202ENST00000380518 N4BP2L2Q92802 583 aaPredicted RBP17.07■□□□□ 0.32
COL2A1-202ENST00000380518 LRRC37BQ96QE4 947 aa17.07■□□□□ 0.32
COL2A1-202ENST00000380518 MAGEB5Q9BZ81 275 aa17.07■□□□□ 0.32
COL2A1-202ENST00000380518 PREX2Q70Z35 1606 aa17.07■□□□□ 0.32
COL2A1-202ENST00000380518 MED14O60244 1454 aa17.07■□□□□ 0.32
COL2A1-202ENST00000380518 AP3M2P53677 418 aa17.07■□□□□ 0.32
COL2A1-202ENST00000380518 POLE2P56282 527 aa17.07■□□□□ 0.32
COL2A1-202ENST00000380518 HEATR6Q6AI08 1181 aaKnown RBP17.07■□□□□ 0.32
COL2A1-202ENST00000380518 ATG9AQ7Z3C6 839 aa17.07■□□□□ 0.32
COL2A1-202ENST00000380518 STAG2Q8N3U4 1231 aa17.07■□□□□ 0.32
COL2A1-202ENST00000380518 TRIML2Q8N7C3 387 aa17.07■□□□□ 0.32
COL2A1-202ENST00000380518 SNF8Q96H20 258 aa17.07■□□□□ 0.32
COL2A1-202ENST00000380518 POLR3FQ9H1D9 316 aaPredicted RBP17.07■□□□□ 0.32
COL2A1-202ENST00000380518 USP42Q9H9J4 1324 aaKnown RBP17.07■□□□□ 0.32
COL2A1-202ENST00000380518 KRT14P02533 472 aa17.06■□□□□ 0.32
COL2A1-202ENST00000380518 GPD1LQ8N335 351 aa17.06■□□□□ 0.32
COL2A1-202ENST00000380518 GCNAQ96QF7 691 aa17.06■□□□□ 0.32
COL2A1-202ENST00000380518 BFARQ9NZS9 450 aa17.06■□□□□ 0.32
COL2A1-202ENST00000380518 LMCD1Q9NZU5 365 aa17.06■□□□□ 0.32
COL2A1-202ENST00000380518 HERC5Q9UII4 1024 aaKnown RBP17.06■□□□□ 0.32
COL2A1-202ENST00000380518 INPP5FQ9Y2H2 1132 aa17.06■□□□□ 0.32
COL2A1-202ENST00000380518 PYGBP11216 843 aa17.06■□□□□ 0.32
COL2A1-202ENST00000380518 AKR1B1P15121 316 aa17.06■□□□□ 0.32
COL2A1-202ENST00000380518 GUCY1A2P33402 732 aa17.06■□□□□ 0.32
COL2A1-202ENST00000380518 NAA30Q147X3 362 aaPredicted RBP17.06■□□□□ 0.32
COL2A1-202ENST00000380518 NKX1-1Q15270 411 aaPredicted RBP17.06■□□□□ 0.32
COL2A1-202ENST00000380518 LCA5Q86VQ0 697 aa17.06■□□□□ 0.32
COL2A1-202ENST00000380518 BTBD6Q96KE9 485 aa17.06■□□□□ 0.32
COL2A1-202ENST00000380518 RBAKQ9NYW8 714 aaPredicted RBP17.06■□□□□ 0.32
COL2A1-202ENST00000380518 SUCLA2Q9P2R7 463 aaPredicted RBP17.06■□□□□ 0.32
COL2A1-202ENST00000380518 PNPLA6Q8IY17 1366 aa17.06■□□□□ 0.32
COL2A1-202ENST00000380518 TET3O43151 1660 aa17.06■□□□□ 0.32
COL2A1-202ENST00000380518 BNIP3LO60238 219 aa17.06■□□□□ 0.32
COL2A1-202ENST00000380518 PDIA2Q13087 525 aaKnown RBP17.06■□□□□ 0.32
COL2A1-202ENST00000380518 TTLL4Q14679 1199 aa17.06■□□□□ 0.32
COL2A1-202ENST00000380518 SLC10A5Q5PT55 438 aa17.06■□□□□ 0.32
COL2A1-202ENST00000380518 ARHGEF1Q92888 912 aaKnown RBP17.06■□□□□ 0.32
COL2A1-202ENST00000380518 SUGT1Q9Y2Z0 365 aa17.06■□□□□ 0.32
COL2A1-202ENST00000380518 NBPF26B4DH59 902 aa17.05■□□□□ 0.32
COL2A1-202ENST00000380518 H0Y3Z8 333 aa17.05■□□□□ 0.32
COL2A1-202ENST00000380518 TSPY1Q01534 308 aa17.05■□□□□ 0.32
COL2A1-202ENST00000380518 CEP55Q53EZ4 464 aa17.05■□□□□ 0.32
COL2A1-202ENST00000380518 NBPF10Q6P3W6 841 aaKnown RBP17.05■□□□□ 0.32
COL2A1-202ENST00000380518 RHPN2Q8IUC4 686 aa17.05■□□□□ 0.32
COL2A1-202ENST00000380518 NBPF15Q8N660 670 aa17.05■□□□□ 0.32
COL2A1-202ENST00000380518 GCOM2Q9BZD3 368 aaPredicted RBP17.05■□□□□ 0.32
COL2A1-202ENST00000380518 TRIM33Q9UPN9 1127 aa17.05■□□□□ 0.32
COL2A1-202ENST00000380518 ATF5Q9Y2D1 282 aaPredicted RBP17.05■□□□□ 0.32
COL2A1-202ENST00000380518 PCDHA10Q9Y5I2 948 aa17.05■□□□□ 0.32
COL2A1-202ENST00000380518 ADCY10Q96PN6 1610 aa17.05■□□□□ 0.32
COL2A1-202ENST00000380518 A0A1B0GTH6 734 aa17.05■□□□□ 0.32
COL2A1-202ENST00000380518 NLRP14Q86W24 1093 aa17.05■□□□□ 0.32
COL2A1-202ENST00000380518 RUBCNQ92622 972 aa17.05■□□□□ 0.32
COL2A1-202ENST00000380518 WDR24Q96S15 920 aa17.05■□□□□ 0.32
COL2A1-202ENST00000380518 ACAD9Q9H845 621 aa17.05■□□□□ 0.32
COL2A1-202ENST00000380518 ANLNQ9NQW6 1124 aa17.05■□□□□ 0.32
COL2A1-202ENST00000380518 MYL3P08590 195 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms