RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 TBC1D10AQ9BXI6 508 aa10.01□□□□□ -0.81
PTPRA-204ENST00000380393 SNX25Q9H3E2 840 aa10.01□□□□□ -0.81
PTPRA-204ENST00000380393 KLHL14Q9P2G3 628 aa10.01□□□□□ -0.81
PTPRA-204ENST00000380393 COL14A1Q05707 1796 aaKnown RBP10.01□□□□□ -0.81
PTPRA-204ENST00000380393 TLDC2A0PJX2 215 aa10.01□□□□□ -0.81
PTPRA-204ENST00000380393 ECE2O60344 883 aa10.01□□□□□ -0.81
PTPRA-204ENST00000380393 ZPR1O75312 459 aa10.01□□□□□ -0.81
PTPRA-204ENST00000380393 TARSP26639 723 aaKnown RBP10.01□□□□□ -0.81
PTPRA-204ENST00000380393 RXRBP28702 533 aa10.01□□□□□ -0.81
PTPRA-204ENST00000380393 LMNB2Q03252 620 aa10.01□□□□□ -0.81
PTPRA-204ENST00000380393 SLC34A1Q06495 639 aa10.01□□□□□ -0.81
PTPRA-204ENST00000380393 PCSK7Q16549 785 aa10.01□□□□□ -0.81
PTPRA-204ENST00000380393 COBLL1Q53SF7 1204 aa10.01□□□□□ -0.81
PTPRA-204ENST00000380393 CCDC82Q8N4S0 544 aa10.01□□□□□ -0.81
PTPRA-204ENST00000380393 VPS37AQ8NEZ2 397 aa10.01□□□□□ -0.81
PTPRA-204ENST00000380393 TLCD1Q96CP7 247 aa10.01□□□□□ -0.81
PTPRA-204ENST00000380393 ITPKCQ96DU7 683 aa10.01□□□□□ -0.81
PTPRA-204ENST00000380393 HAO1Q9UJM8 370 aa10.01□□□□□ -0.81
PTPRA-204ENST00000380393 DBNLQ9UJU6 430 aaKnown RBP10.01□□□□□ -0.81
PTPRA-204ENST00000380393 KCNH3Q9ULD8 1083 aa10.01□□□□□ -0.81
PTPRA-204ENST00000380393 TBC1D30Q9Y2I9 924 aa10.01□□□□□ -0.81
PTPRA-204ENST00000380393 ZBTB1Q9Y2K1 713 aa10.01□□□□□ -0.81
PTPRA-204ENST00000380393 SUGT1Q9Y2Z0 365 aa10.01□□□□□ -0.81
PTPRA-204ENST00000380393 PLCH1Q4KWH8 1693 aa10.01□□□□□ -0.81
PTPRA-204ENST00000380393 MOCS3O95396 460 aa10.01□□□□□ -0.81
PTPRA-204ENST00000380393 ERCC5P28715 1186 aaPredicted RBP10.01□□□□□ -0.81
PTPRA-204ENST00000380393 GTF2H1P32780 548 aa10.01□□□□□ -0.81
PTPRA-204ENST00000380393 COPB2P35606 906 aa10.01□□□□□ -0.81
PTPRA-204ENST00000380393 AP1B1Q10567 949 aa10.01□□□□□ -0.81
PTPRA-204ENST00000380393 SNRNP48Q6IEG0 339 aaKnown RBP10.01□□□□□ -0.81
PTPRA-204ENST00000380393 RBM44Q6ZP01 1051 aaKnown RBP10.01□□□□□ -0.81
PTPRA-204ENST00000380393 CCDC125Q86Z20 511 aa10.01□□□□□ -0.81
PTPRA-204ENST00000380393 IFNLR1Q8IU57 520 aaPredicted RBP10.01□□□□□ -0.81
PTPRA-204ENST00000380393 KBTBD2Q8IY47 623 aa10.01□□□□□ -0.81
PTPRA-204ENST00000380393 RAVER1Q8IY67 606 aaKnown RBP10.01□□□□□ -0.81
PTPRA-204ENST00000380393 TRPC4APQ8TEL6 797 aa10.01□□□□□ -0.81
PTPRA-204ENST00000380393 SPZ1Q9BXG8 430 aa10.01□□□□□ -0.81
PTPRA-204ENST00000380393 CCDC113Q9H0I3 377 aa10.01□□□□□ -0.81
PTPRA-204ENST00000380393 PARVGQ9HBI0 331 aa10.01□□□□□ -0.81
PTPRA-204ENST00000380393 CNGB3Q9NQW8 809 aa10.01□□□□□ -0.81
PTPRA-204ENST00000380393 PPP1R9AQ9ULJ8 1098 aa10.01□□□□□ -0.81
PTPRA-204ENST00000380393 ANKRD34BA5PLL1 514 aa10□□□□□ -0.81
PTPRA-204ENST00000380393 TCP11X1B4DZS4 312 aa10□□□□□ -0.81
PTPRA-204ENST00000380393 SH3BP5O60239 455 aa10□□□□□ -0.81
PTPRA-204ENST00000380393 KRT36O76013 467 aa10□□□□□ -0.81
PTPRA-204ENST00000380393 DDHD2O94830 711 aa10□□□□□ -0.81
PTPRA-204ENST00000380393 PCYT1AP49585 367 aa10□□□□□ -0.81
PTPRA-204ENST00000380393 GPC3P51654 580 aa10□□□□□ -0.81
PTPRA-204ENST00000380393 LPIN1Q14693 890 aa10□□□□□ -0.81
PTPRA-204ENST00000380393 ZNF662Q6ZS27 426 aa10□□□□□ -0.81
PTPRA-204ENST00000380393 KLHL7Q8IXQ5 586 aa10□□□□□ -0.81
PTPRA-204ENST00000380393 ARHGEF2Q92974 986 aaKnown RBP10□□□□□ -0.81
PTPRA-204ENST00000380393 MLXIPQ9HAP2 919 aa10□□□□□ -0.81
PTPRA-204ENST00000380393 COQ6Q9Y2Z9 468 aa10□□□□□ -0.81
PTPRA-204ENST00000380393 COL15A1P39059 1388 aa10□□□□□ -0.81
PTPRA-204ENST00000380393 SPATA31A6Q5VVP1 1343 aa10□□□□□ -0.81
PTPRA-204ENST00000380393 MED23Q9ULK4 1368 aa10□□□□□ -0.81
PTPRA-204ENST00000380393 SH3PXD2BA1X283 911 aa10□□□□□ -0.81
PTPRA-204ENST00000380393 GJB6O95452 261 aa10□□□□□ -0.81
PTPRA-204ENST00000380393 CETN2P41208 172 aa10□□□□□ -0.81
PTPRA-204ENST00000380393 CTAG1AP78358 180 aa10□□□□□ -0.81
PTPRA-204ENST00000380393 MORC3Q14149 939 aa10□□□□□ -0.81
PTPRA-204ENST00000380393 SLC4A9Q96Q91 983 aa10□□□□□ -0.81
PTPRA-204ENST00000380393 LRRC4CQ9HCJ2 640 aa10□□□□□ -0.81
PTPRA-204ENST00000380393 VTA1Q9NP79 307 aa10□□□□□ -0.81
PTPRA-204ENST00000380393 SNRKQ9NRH2 765 aa10□□□□□ -0.81
PTPRA-204ENST00000380393 GTF3C4Q9UKN8 822 aa10□□□□□ -0.81
PTPRA-204ENST00000380393 LOC105371267A0A1B0GV96 52 aa10□□□□□ -0.81
PTPRA-204ENST00000380393 TTC26A0AVF1 554 aa10□□□□□ -0.81
PTPRA-204ENST00000380393 RAD51CO43502 376 aa10□□□□□ -0.81
PTPRA-204ENST00000380393 ATP5HO75947 161 aa10□□□□□ -0.81
PTPRA-204ENST00000380393 MYCP01106 439 aaPredicted RBP10□□□□□ -0.81
PTPRA-204ENST00000380393 POLR2EP19388 210 aaKnown RBP10□□□□□ -0.81
PTPRA-204ENST00000380393 AFMP43652 599 aa10□□□□□ -0.81
PTPRA-204ENST00000380393 RNASE9P60153 205 aaKnown RBP10□□□□□ -0.81
PTPRA-204ENST00000380393 GIT2Q14161 759 aa10□□□□□ -0.81
PTPRA-204ENST00000380393 SLC39A14Q15043 492 aa10□□□□□ -0.81
PTPRA-204ENST00000380393 VPS72Q15906 364 aa10□□□□□ -0.81
PTPRA-204ENST00000380393 SYCP2LQ5T4T6 812 aa10□□□□□ -0.81
PTPRA-204ENST00000380393 DDX42Q86XP3 938 aaKnown RBP eCLIP10□□□□□ -0.81
PTPRA-204ENST00000380393 CROCCP3Q8IVE0 287 aa10□□□□□ -0.81
PTPRA-204ENST00000380393 SUN5Q8TC36 379 aa10□□□□□ -0.81
PTPRA-204ENST00000380393 PHKBQ93100 1093 aa10□□□□□ -0.81
PTPRA-204ENST00000380393 GJD4Q96KN9 370 aaPredicted RBP10□□□□□ -0.81
PTPRA-204ENST00000380393 USP29Q9HBJ7 922 aa10□□□□□ -0.81
PTPRA-204ENST00000380393 FKBP14Q9NWM8 211 aa10□□□□□ -0.81
PTPRA-204ENST00000380393 TAB2Q9NYJ8 693 aa10□□□□□ -0.81
PTPRA-204ENST00000380393 LRWD1Q9UFC0 647 aa10□□□□□ -0.81
PTPRA-204ENST00000380393 PCDHB2Q9Y5E7 798 aa10□□□□□ -0.81
PTPRA-204ENST00000380393 FUOMA2VDF0 154 aa9.99□□□□□ -0.81
PTPRA-204ENST00000380393 CHRNB1P11230 501 aa9.99□□□□□ -0.81
PTPRA-204ENST00000380393 SERPINB6P35237 376 aa9.99□□□□□ -0.81
PTPRA-204ENST00000380393 GRIA2P42262 883 aa9.99□□□□□ -0.81
PTPRA-204ENST00000380393 MMP13P45452 471 aa9.99□□□□□ -0.81
PTPRA-204ENST00000380393 RASSF2P50749 326 aa9.99□□□□□ -0.81
PTPRA-204ENST00000380393 FKBP4Q02790 459 aaKnown RBP eCLIP9.99□□□□□ -0.81
PTPRA-204ENST00000380393 ZNF449Q6P9G9 518 aa9.99□□□□□ -0.81
PTPRA-204ENST00000380393 CLEC4GQ6UXB4 293 aa9.99□□□□□ -0.81
PTPRA-204ENST00000380393 FASTKD5Q7L8L6 764 aaKnown RBP9.99□□□□□ -0.81
PTPRA-204ENST00000380393 RALYLQ86SE5 291 aaKnown RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms