RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 EIF3JO75822 258 aaKnown RBP11.37□□□□□ -0.59
POLR2J3-201ENST00000379340 RGS20O76081 388 aa11.37□□□□□ -0.59
POLR2J3-201ENST00000379340 H2AFZP0C0S5 128 aa11.37□□□□□ -0.59
POLR2J3-201ENST00000379340 KLRC1P26715 233 aa11.37□□□□□ -0.59
POLR2J3-201ENST00000379340 COPB2P35606 906 aa11.37□□□□□ -0.59
POLR2J3-201ENST00000379340 IREB2P48200 963 aaKnown RBP11.37□□□□□ -0.59
POLR2J3-201ENST00000379340 NPEPPSP55786 919 aa11.37□□□□□ -0.59
POLR2J3-201ENST00000379340 FKBP1BP68106 108 aa11.37□□□□□ -0.59
POLR2J3-201ENST00000379340 GPS2Q13227 327 aa11.37□□□□□ -0.59
POLR2J3-201ENST00000379340 VGLL4Q14135 290 aa11.37□□□□□ -0.59
POLR2J3-201ENST00000379340 PLS1Q14651 629 aa11.37□□□□□ -0.59
POLR2J3-201ENST00000379340 CBWD6Q4V339 395 aa11.37□□□□□ -0.59
POLR2J3-201ENST00000379340 XKR3Q5GH77 459 aa11.37□□□□□ -0.59
POLR2J3-201ENST00000379340 CBWD3Q5JTY5 395 aa11.37□□□□□ -0.59
POLR2J3-201ENST00000379340 CBWD5Q5RIA9 395 aa11.37□□□□□ -0.59
POLR2J3-201ENST00000379340 UTP14CQ5TAP6 766 aaKnown RBP11.37□□□□□ -0.59
POLR2J3-201ENST00000379340 CCDC181Q5TID7 509 aa11.37□□□□□ -0.59
POLR2J3-201ENST00000379340 PLA2G4FQ68DD2 849 aa11.37□□□□□ -0.59
POLR2J3-201ENST00000379340 ABHD15Q6UXT9 468 aa11.37□□□□□ -0.59
POLR2J3-201ENST00000379340 LBX2Q6XYB7 198 aa11.37□□□□□ -0.59
POLR2J3-201ENST00000379340 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.37□□□□□ -0.59
POLR2J3-201ENST00000379340 H2AFVQ71UI9 128 aa11.37□□□□□ -0.59
POLR2J3-201ENST00000379340 ANO5Q75V66 913 aa11.37□□□□□ -0.59
POLR2J3-201ENST00000379340 HDXQ7Z353 690 aa11.37□□□□□ -0.59
POLR2J3-201ENST00000379340 PROCA1Q8NCQ7 364 aaPredicted RBP11.37□□□□□ -0.59
POLR2J3-201ENST00000379340 TMEM161BQ8NDZ6 487 aa11.37□□□□□ -0.59
POLR2J3-201ENST00000379340 CALR3Q96L12 384 aaKnown RBP11.37□□□□□ -0.59
POLR2J3-201ENST00000379340 CEP170P1Q96L14 293 aa11.37□□□□□ -0.59
POLR2J3-201ENST00000379340 PNKPQ96T60 521 aa11.37□□□□□ -0.59
POLR2J3-201ENST00000379340 ATP6V0A4Q9HBG4 840 aa11.37□□□□□ -0.59
POLR2J3-201ENST00000379340 KMT5AQ9NQR1 393 aa11.37□□□□□ -0.59
POLR2J3-201ENST00000379340 TBX20Q9UMR3 447 aa11.37□□□□□ -0.59
POLR2J3-201ENST00000379340 IGSF9BQ9UPX0 1349 aa11.37□□□□□ -0.59
POLR2J3-201ENST00000379340 HTTP42858 3142 aa11.37□□□□□ -0.59
POLR2J3-201ENST00000379340 MYH9P35579 1960 aaKnown RBP11.37□□□□□ -0.59
POLR2J3-201ENST00000379340 MAP2K7O14733 419 aa11.37□□□□□ -0.59
POLR2J3-201ENST00000379340 SLC16A4O15374 487 aa11.37□□□□□ -0.59
POLR2J3-201ENST00000379340 BUB1O43683 1085 aa11.37□□□□□ -0.59
POLR2J3-201ENST00000379340 EVI5O60447 810 aa11.37□□□□□ -0.59
POLR2J3-201ENST00000379340 PALMO75781 387 aa11.37□□□□□ -0.59
POLR2J3-201ENST00000379340 SEC31AO94979 1220 aaKnown RBP11.37□□□□□ -0.59
POLR2J3-201ENST00000379340 STBD1O95210 358 aa11.37□□□□□ -0.59
POLR2J3-201ENST00000379340 SUPT20HL2P0C7V6 817 aa11.37□□□□□ -0.59
POLR2J3-201ENST00000379340 TRIM49P0CI25 452 aa11.37□□□□□ -0.59
POLR2J3-201ENST00000379340 TRIM49CP0CI26 452 aa11.37□□□□□ -0.59
POLR2J3-201ENST00000379340 NPTX2P47972 431 aa11.37□□□□□ -0.59
POLR2J3-201ENST00000379340 ACTR2P61160 394 aa11.37□□□□□ -0.59
POLR2J3-201ENST00000379340 CAP1Q01518 475 aa11.37□□□□□ -0.59
POLR2J3-201ENST00000379340 KIF22Q14807 665 aa11.37□□□□□ -0.59
POLR2J3-201ENST00000379340 DRAP1Q14919 205 aaPredicted RBP11.37□□□□□ -0.59
POLR2J3-201ENST00000379340 CFAP221Q4G0U5 840 aa11.37□□□□□ -0.59
POLR2J3-201ENST00000379340 EPC2Q52LR7 807 aa11.37□□□□□ -0.59
POLR2J3-201ENST00000379340 BEND6Q5SZJ8 279 aaPredicted RBP11.37□□□□□ -0.59
POLR2J3-201ENST00000379340 MEI1Q5TIA1 1274 aa11.37□□□□□ -0.59
POLR2J3-201ENST00000379340 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.37□□□□□ -0.59
POLR2J3-201ENST00000379340 SYCE1Q8N0S2 351 aa11.37□□□□□ -0.59
POLR2J3-201ENST00000379340 IFT74Q96LB3 600 aa11.37□□□□□ -0.59
POLR2J3-201ENST00000379340 MPHOSPH6Q99547 160 aaKnown RBP11.37□□□□□ -0.59
POLR2J3-201ENST00000379340 TLR10Q9BXR5 811 aa11.37□□□□□ -0.59
POLR2J3-201ENST00000379340 FUT8Q9BYC5 575 aa11.37□□□□□ -0.59
POLR2J3-201ENST00000379340 IKZF4Q9H2S9 585 aa11.37□□□□□ -0.59
POLR2J3-201ENST00000379340 ACBD3Q9H3P7 528 aa11.37□□□□□ -0.59
POLR2J3-201ENST00000379340 SALL4Q9UJQ4 1053 aa11.37□□□□□ -0.59
POLR2J3-201ENST00000379340 FZD1Q9UP38 647 aa11.37□□□□□ -0.59
POLR2J3-201ENST00000379340 EMSYQ7Z589 1322 aa11.37□□□□□ -0.59
POLR2J3-201ENST00000379340 MKI67P46013 3256 aaKnown RBP11.36□□□□□ -0.59
POLR2J3-201ENST00000379340 CCDC169A6NNP5 214 aa11.36□□□□□ -0.59
POLR2J3-201ENST00000379340 KIAA0391O15091 583 aaKnown RBP11.36□□□□□ -0.59
POLR2J3-201ENST00000379340 ATG7O95352 703 aa11.36□□□□□ -0.59
POLR2J3-201ENST00000379340 TFRCP02786 760 aaKnown RBP11.36□□□□□ -0.59
POLR2J3-201ENST00000379340 EN2P19622 333 aaPredicted RBP11.36□□□□□ -0.59
POLR2J3-201ENST00000379340 GARTP22102 1010 aa11.36□□□□□ -0.59
POLR2J3-201ENST00000379340 GTF2H1P32780 548 aa11.36□□□□□ -0.59
POLR2J3-201ENST00000379340 VSNL1P62760 191 aa11.36□□□□□ -0.59
POLR2J3-201ENST00000379340 PRKCEQ02156 737 aa11.36□□□□□ -0.59
POLR2J3-201ENST00000379340 PPATQ06203 517 aa11.36□□□□□ -0.59
POLR2J3-201ENST00000379340 ENOX2Q16206 610 aaKnown RBP11.36□□□□□ -0.59
POLR2J3-201ENST00000379340 GLE1Q53GS7 698 aaKnown RBP11.36□□□□□ -0.59
POLR2J3-201ENST00000379340 SWSAP1Q6NVH7 229 aa11.36□□□□□ -0.59
POLR2J3-201ENST00000379340 NFRKBQ6P4R8 1299 aa11.36□□□□□ -0.59
POLR2J3-201ENST00000379340 GPIHBP1Q8IV16 184 aa11.36□□□□□ -0.59
POLR2J3-201ENST00000379340 ANKRD35Q8N283 1001 aa11.36□□□□□ -0.59
POLR2J3-201ENST00000379340 ANKRD13CQ8N6S4 541 aa11.36□□□□□ -0.59
POLR2J3-201ENST00000379340 SLC30A5Q8TAD4 765 aa11.36□□□□□ -0.59
POLR2J3-201ENST00000379340 LMO3Q8TAP4 145 aa11.36□□□□□ -0.59
POLR2J3-201ENST00000379340 TMC2Q8TDI7 906 aa11.36□□□□□ -0.59
POLR2J3-201ENST00000379340 UBE2Q2Q8WVN8 375 aa11.36□□□□□ -0.59
POLR2J3-201ENST00000379340 CBWD1Q9BRT8 395 aa11.36□□□□□ -0.59
POLR2J3-201ENST00000379340 PCIF1Q9H4Z3 704 aa11.36□□□□□ -0.59
POLR2J3-201ENST00000379340 GPRC5CQ9NQ84 441 aa11.36□□□□□ -0.59
POLR2J3-201ENST00000379340 PDLIM7Q9NR12 457 aa11.36□□□□□ -0.59
POLR2J3-201ENST00000379340 CYP26B1Q9NR63 512 aa11.36□□□□□ -0.59
POLR2J3-201ENST00000379340 AJAP1Q9UKB5 411 aaPredicted RBP11.36□□□□□ -0.59
POLR2J3-201ENST00000379340 COLQQ9Y215 455 aaPredicted RBP11.36□□□□□ -0.59
POLR2J3-201ENST00000379340 PPME1Q9Y570 386 aa11.36□□□□□ -0.59
POLR2J3-201ENST00000379340 DOCK5Q9H7D0 1870 aa11.35□□□□□ -0.59
POLR2J3-201ENST00000379340 SIP14410 1827 aa11.35□□□□□ -0.59
POLR2J3-201ENST00000379340 NCANO14594 1321 aa11.35□□□□□ -0.59
POLR2J3-201ENST00000379340 A0A0G2JLL6 359 aaPredicted RBP11.35□□□□□ -0.59
POLR2J3-201ENST00000379340 DENND3A2RUS2 1198 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms