RNA–Protein interactions for RNA: ENST00000378809.8

RAB3IP-203, Transcript of RAB3A interacting protein, humanhuman

TSL 5

Gene RAB3IP, Length 2,008 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-203ENST00000378809 ARIH2O95376 493 aa16.04■□□□□ 0.16
RAB3IP-203ENST00000378809 PRKCIP41743 596 aa16.04■□□□□ 0.16
RAB3IP-203ENST00000378809 LIG4P49917 911 aa16.04■□□□□ 0.16
RAB3IP-203ENST00000378809 STRN3Q13033 797 aa16.04■□□□□ 0.16
RAB3IP-203ENST00000378809 SLC39A4Q6P5W5 647 aa16.04■□□□□ 0.16
RAB3IP-203ENST00000378809 DEPTORQ8TB45 409 aa16.04■□□□□ 0.16
RAB3IP-203ENST00000378809 PLEKHO2Q8TD55 490 aa16.04■□□□□ 0.16
RAB3IP-203ENST00000378809 FGD4Q96M96 766 aa16.04■□□□□ 0.16
RAB3IP-203ENST00000378809 PCYT2Q99447 389 aa16.04■□□□□ 0.16
RAB3IP-203ENST00000378809 PORCNQ9H237 461 aa16.04■□□□□ 0.16
RAB3IP-203ENST00000378809 GRIN3BO60391 1043 aa16.04■□□□□ 0.16
RAB3IP-203ENST00000378809 H2AFXP16104 143 aaPredicted RBP16.04■□□□□ 0.16
RAB3IP-203ENST00000378809 MAP2K1Q02750 393 aaPredicted RBP16.04■□□□□ 0.16
RAB3IP-203ENST00000378809 BRDTQ58F21 947 aaPredicted RBP16.04■□□□□ 0.16
RAB3IP-203ENST00000378809 PHLDB3Q6NSJ2 640 aa16.04■□□□□ 0.16
RAB3IP-203ENST00000378809 ASAP3Q8TDY4 903 aa16.04■□□□□ 0.16
RAB3IP-203ENST00000378809 DHX33Q9H6R0 707 aaKnown RBP16.04■□□□□ 0.16
RAB3IP-203ENST00000378809 UBE2TQ9NPD8 197 aaPredicted RBP16.04■□□□□ 0.16
RAB3IP-203ENST00000378809 ARHGAP28Q9P2N2 729 aa16.04■□□□□ 0.16
RAB3IP-203ENST00000378809 KCNG1Q9UIX4 513 aa16.04■□□□□ 0.16
RAB3IP-203ENST00000378809 DDX41Q9UJV9 622 aaKnown RBP16.04■□□□□ 0.16
RAB3IP-203ENST00000378809 P4HA2O15460 535 aa16.03■□□□□ 0.16
RAB3IP-203ENST00000378809 KLRC1P26715 233 aa16.03■□□□□ 0.16
RAB3IP-203ENST00000378809 HSDL1Q3SXM5 330 aa16.03■□□□□ 0.16
RAB3IP-203ENST00000378809 C1orf220Q5T0J3 134 aa16.03■□□□□ 0.16
RAB3IP-203ENST00000378809 ALKBH5Q6P6C2 394 aaKnown RBP16.03■□□□□ 0.16
RAB3IP-203ENST00000378809 KCNV1Q6PIU1 500 aa16.03■□□□□ 0.16
RAB3IP-203ENST00000378809 DNAAF5Q86Y56 855 aa16.03■□□□□ 0.16
RAB3IP-203ENST00000378809 RNF10Q8N5U6 811 aaKnown RBP16.03■□□□□ 0.16
RAB3IP-203ENST00000378809 PSMB7Q99436 277 aa16.03■□□□□ 0.16
RAB3IP-203ENST00000378809 NIFKQ9BYG3 293 aaKnown RBP16.03■□□□□ 0.16
RAB3IP-203ENST00000378809 TMEM117Q9H0C3 514 aa16.03■□□□□ 0.16
RAB3IP-203ENST00000378809 NAGPAQ9UK23 515 aa16.03■□□□□ 0.16
RAB3IP-203ENST00000378809 USP20Q9Y2K6 914 aa16.03■□□□□ 0.16
RAB3IP-203ENST00000378809 DNAJC25-GNG10A0A024R161 153 aa16.02■□□□□ 0.16
RAB3IP-203ENST00000378809 PDHXO00330 501 aa16.02■□□□□ 0.16
RAB3IP-203ENST00000378809 SOCS7O14512 581 aa16.02■□□□□ 0.16
RAB3IP-203ENST00000378809 ZNF185O15231 689 aa16.02■□□□□ 0.16
RAB3IP-203ENST00000378809 CCDC172P0C7W6 258 aa16.02■□□□□ 0.16
RAB3IP-203ENST00000378809 DLATP10515 647 aaKnown RBP16.02■□□□□ 0.16
RAB3IP-203ENST00000378809 ZSCAN20P17040 1043 aaPredicted RBP16.02■□□□□ 0.16
RAB3IP-203ENST00000378809 RFX1P22670 979 aa16.02■□□□□ 0.16
RAB3IP-203ENST00000378809 GLRA2P23416 452 aa16.02■□□□□ 0.16
RAB3IP-203ENST00000378809 ABCD1P33897 745 aa16.02■□□□□ 0.16
RAB3IP-203ENST00000378809 CLCN6P51797 869 aa16.02■□□□□ 0.16
RAB3IP-203ENST00000378809 NAB2Q15742 525 aa16.02■□□□□ 0.16
RAB3IP-203ENST00000378809 C10orf76Q5T2E6 689 aa16.02■□□□□ 0.16
RAB3IP-203ENST00000378809 TAS1R3Q7RTX0 852 aa16.02■□□□□ 0.16
RAB3IP-203ENST00000378809 USP37Q86T82 979 aa16.02■□□□□ 0.16
RAB3IP-203ENST00000378809 TRIM50Q86XT4 487 aa16.02■□□□□ 0.16
RAB3IP-203ENST00000378809 FMNL3Q8IVF7 1028 aa16.02■□□□□ 0.16
RAB3IP-203ENST00000378809 DHX37Q8IY37 1157 aaKnown RBP16.02■□□□□ 0.16
RAB3IP-203ENST00000378809 GPD1LQ8N335 351 aa16.02■□□□□ 0.16
RAB3IP-203ENST00000378809 GPRC5AQ8NFJ5 357 aa16.02■□□□□ 0.16
RAB3IP-203ENST00000378809 LMO3Q8TAP4 145 aa16.02■□□□□ 0.16
RAB3IP-203ENST00000378809 SPATA33Q96N06 139 aa16.02■□□□□ 0.16
RAB3IP-203ENST00000378809 POP1Q99575 1024 aaKnown RBP16.02■□□□□ 0.16
RAB3IP-203ENST00000378809 FAM213AQ9BRX8 229 aa16.02■□□□□ 0.16
RAB3IP-203ENST00000378809 SEPT11Q9NVA2 429 aaKnown RBP16.02■□□□□ 0.16
RAB3IP-203ENST00000378809 CCL15-CCL14A0A0B4J2E2 113 aa16.02■□□□□ 0.15
RAB3IP-203ENST00000378809 RFC5P40937 340 aa16.02■□□□□ 0.15
RAB3IP-203ENST00000378809 MATR3P43243 847 aaKnown RBP eCLIP16.02■□□□□ 0.15
RAB3IP-203ENST00000378809 NAMPTP43490 491 aa16.02■□□□□ 0.15
RAB3IP-203ENST00000378809 CKAP4Q07065 602 aaKnown RBP16.02■□□□□ 0.15
RAB3IP-203ENST00000378809 CCL15Q16663 113 aa16.02■□□□□ 0.15
RAB3IP-203ENST00000378809 EPC2Q52LR7 807 aa16.02■□□□□ 0.15
RAB3IP-203ENST00000378809 CELF3Q5SZQ8 465 aaKnown RBP16.02■□□□□ 0.15
RAB3IP-203ENST00000378809 ARHGEF19Q8IW93 802 aa16.02■□□□□ 0.15
RAB3IP-203ENST00000378809 U2AF1L4Q8WU68 220 aaKnown RBP16.02■□□□□ 0.15
RAB3IP-203ENST00000378809 GPR88Q9GZN0 384 aa16.02■□□□□ 0.15
RAB3IP-203ENST00000378809 SNX12Q9UMY4 172 aa16.02■□□□□ 0.15
RAB3IP-203ENST00000378809 ARID2Q68CP9 1835 aa16.02■□□□□ 0.15
RAB3IP-203ENST00000378809 LRRIQ3A6PVS8 624 aaPredicted RBP16.01■□□□□ 0.15
RAB3IP-203ENST00000378809 K7ERI5 159 aa16.01■□□□□ 0.15
RAB3IP-203ENST00000378809 NCK2O43639 380 aa16.01■□□□□ 0.15
RAB3IP-203ENST00000378809 PALMO75781 387 aa16.01■□□□□ 0.15
RAB3IP-203ENST00000378809 RHOXF2BP0C7M4 288 aa16.01■□□□□ 0.15
RAB3IP-203ENST00000378809 TXNP10599 105 aaKnown RBP16.01■□□□□ 0.15
RAB3IP-203ENST00000378809 CETPP11597 493 aa16.01■□□□□ 0.15
RAB3IP-203ENST00000378809 GARTP22102 1010 aa16.01■□□□□ 0.15
RAB3IP-203ENST00000378809 ANXA13P27216 316 aa16.01■□□□□ 0.15
RAB3IP-203ENST00000378809 USP8P40818 1118 aa16.01■□□□□ 0.15
RAB3IP-203ENST00000378809 CCNA1P78396 465 aa16.01■□□□□ 0.15
RAB3IP-203ENST00000378809 BMS1Q14692 1282 aaKnown RBP16.01■□□□□ 0.15
RAB3IP-203ENST00000378809 KRT39Q6A163 491 aa16.01■□□□□ 0.15
RAB3IP-203ENST00000378809 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.01■□□□□ 0.15
RAB3IP-203ENST00000378809 AFAP1L1Q8TED9 768 aa16.01■□□□□ 0.15
RAB3IP-203ENST00000378809 PARD3BQ8TEW8 1205 aa16.01■□□□□ 0.15
RAB3IP-203ENST00000378809 FAM167AQ96KS9 214 aa16.01■□□□□ 0.15
RAB3IP-203ENST00000378809 MMS19Q96T76 1030 aa16.01■□□□□ 0.15
RAB3IP-203ENST00000378809 GPR20Q99678 358 aa16.01■□□□□ 0.15
RAB3IP-203ENST00000378809 RHOXF2Q9BQY4 288 aa16.01■□□□□ 0.15
RAB3IP-203ENST00000378809 CCDC94Q9BW85 323 aaPredicted RBP16.01■□□□□ 0.15
RAB3IP-203ENST00000378809 PARD6BQ9BYG5 372 aa16.01■□□□□ 0.15
RAB3IP-203ENST00000378809 TOPORSQ9NS56 1045 aaPredicted RBP16.01■□□□□ 0.15
RAB3IP-203ENST00000378809 DAAM1Q9Y4D1 1078 aa16.01■□□□□ 0.15
RAB3IP-203ENST00000378809 TMCO5BA8MYB1 307 aa16.01■□□□□ 0.15
RAB3IP-203ENST00000378809 FOXN3O00409 490 aaPredicted RBP16.01■□□□□ 0.15
RAB3IP-203ENST00000378809 CXCR5P32302 372 aa16.01■□□□□ 0.15
RAB3IP-203ENST00000378809 ARL2P36404 184 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms