RNA–Protein interactions for RNA: ENST00000378198.8

TDP2-202, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TDP2, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-202ENST00000378198 GPC5P78333 572 aa19.64■□□□□ 0.73
TDP2-202ENST00000378198 PPP3CAQ08209 521 aa19.64■□□□□ 0.73
TDP2-202ENST00000378198 DLGAP5Q15398 846 aa19.64■□□□□ 0.73
TDP2-202ENST00000378198 ARHGEF19Q8IW93 802 aa19.64■□□□□ 0.73
TDP2-202ENST00000378198 XXYLT1Q8NBI6 393 aa19.64■□□□□ 0.73
TDP2-202ENST00000378198 SLC20A1Q8WUM9 679 aa19.64■□□□□ 0.73
TDP2-202ENST00000378198 KCNH7Q9NS40 1196 aa19.64■□□□□ 0.73
TDP2-202ENST00000378198 BCCIPQ9P287 314 aaKnown RBP eCLIP19.64■□□□□ 0.73
TDP2-202ENST00000378198 RASAL2Q9UJF2 1139 aa19.64■□□□□ 0.73
TDP2-202ENST00000378198 ZHX2Q9Y6X8 837 aa19.64■□□□□ 0.73
TDP2-202ENST00000378198 E7EVH7 732 aa19.63■□□□□ 0.73
TDP2-202ENST00000378198 PMM2O15305 246 aa19.63■□□□□ 0.73
TDP2-202ENST00000378198 RTN2O75298 545 aa19.63■□□□□ 0.73
TDP2-202ENST00000378198 CHRNA5P30532 468 aa19.63■□□□□ 0.73
TDP2-202ENST00000378198 SEC24CP53992 1094 aa19.63■□□□□ 0.73
TDP2-202ENST00000378198 ODF2Q5BJF6 829 aa19.63■□□□□ 0.73
TDP2-202ENST00000378198 SAMD1Q6SPF0 538 aaPredicted RBP19.63■□□□□ 0.73
TDP2-202ENST00000378198 MAEAQ7L5Y9 396 aa19.63■□□□□ 0.73
TDP2-202ENST00000378198 MORC4Q8TE76 937 aa19.63■□□□□ 0.73
TDP2-202ENST00000378198 ALG3Q92685 438 aa19.63■□□□□ 0.73
TDP2-202ENST00000378198 RPS6KC1Q96S38 1066 aa19.63■□□□□ 0.73
TDP2-202ENST00000378198 ST6GALNAC4Q9H4F1 302 aa19.63■□□□□ 0.73
TDP2-202ENST00000378198 ERVK-5Q9HDB9 667 aa19.63■□□□□ 0.73
TDP2-202ENST00000378198 USP20Q9Y2K6 914 aa19.63■□□□□ 0.73
TDP2-202ENST00000378198 CNTNAP1P78357 1384 aa19.63■□□□□ 0.73
TDP2-202ENST00000378198 ICAM1P05362 532 aa19.63■□□□□ 0.73
TDP2-202ENST00000378198 CAP2P40123 477 aa19.63■□□□□ 0.73
TDP2-202ENST00000378198 RARRES1P49788 294 aa19.63■□□□□ 0.73
TDP2-202ENST00000378198 ZNF211Q13398 564 aaPredicted RBP19.63■□□□□ 0.73
TDP2-202ENST00000378198 RSBN1LQ6PCB5 846 aaPredicted RBP19.63■□□□□ 0.73
TDP2-202ENST00000378198 RPUSD2Q8IZ73 545 aaKnown RBP19.63■□□□□ 0.73
TDP2-202ENST00000378198 OTUD6BQ8N6M0 293 aa19.63■□□□□ 0.73
TDP2-202ENST00000378198 TIPINQ9BVW5 301 aa19.63■□□□□ 0.73
TDP2-202ENST00000378198 TRIM31Q9BZY9 425 aa19.63■□□□□ 0.73
TDP2-202ENST00000378198 FBXO28Q9NVF7 368 aa19.63■□□□□ 0.73
TDP2-202ENST00000378198 CCPG1Q9ULG6 757 aa19.63■□□□□ 0.73
TDP2-202ENST00000378198 NOVA2Q9UNW9 492 aaKnown RBP19.63■□□□□ 0.73
TDP2-202ENST00000378198 DHX15O43143 795 aaKnown RBP19.62■□□□□ 0.73
TDP2-202ENST00000378198 LYPLA2O95372 231 aa19.62■□□□□ 0.73
TDP2-202ENST00000378198 GGPS1O95749 300 aa19.62■□□□□ 0.73
TDP2-202ENST00000378198 PTGER2P43116 358 aa19.62■□□□□ 0.73
TDP2-202ENST00000378198 GCLMP48507 274 aa19.62■□□□□ 0.73
TDP2-202ENST00000378198 GTF2BQ00403 316 aa19.62■□□□□ 0.73
TDP2-202ENST00000378198 BBXQ8WY36 941 aaPredicted RBP19.62■□□□□ 0.73
TDP2-202ENST00000378198 IWS1Q96ST2 819 aa19.62■□□□□ 0.73
TDP2-202ENST00000378198 CBWD1Q9BRT8 395 aa19.62■□□□□ 0.73
TDP2-202ENST00000378198 ZDHHC18Q9NUE0 388 aa19.62■□□□□ 0.73
TDP2-202ENST00000378198 HSPBP1Q9NZL4 362 aa19.62■□□□□ 0.73
TDP2-202ENST00000378198 ATP8A1Q9Y2Q0 1164 aa19.62■□□□□ 0.73
TDP2-202ENST00000378198 GMNCA6NCL1 334 aa19.61■□□□□ 0.73
TDP2-202ENST00000378198 PHF2O75151 1096 aa19.61■□□□□ 0.73
TDP2-202ENST00000378198 APBA3O96018 575 aa19.61■□□□□ 0.73
TDP2-202ENST00000378198 GZMAP12544 262 aa19.61■□□□□ 0.73
TDP2-202ENST00000378198 CHRNA3P32297 505 aa19.61■□□□□ 0.73
TDP2-202ENST00000378198 QARSP47897 775 aaKnown RBP19.61■□□□□ 0.73
TDP2-202ENST00000378198 IFFO1Q0D2I5 559 aa19.61■□□□□ 0.73
TDP2-202ENST00000378198 KRT71Q3SY84 523 aa19.61■□□□□ 0.73
TDP2-202ENST00000378198 SPDYE2Q495Y8 402 aa19.61■□□□□ 0.73
TDP2-202ENST00000378198 GRIPAP1Q4V328 841 aa19.61■□□□□ 0.73
TDP2-202ENST00000378198 C1orf220Q5T0J3 134 aa19.61■□□□□ 0.73
TDP2-202ENST00000378198 ADAT2Q7Z6V5 191 aaKnown RBP19.61■□□□□ 0.73
TDP2-202ENST00000378198 JAMLQ86YT9 394 aa19.61■□□□□ 0.73
TDP2-202ENST00000378198 AGBL1Q96MI9 1066 aa19.61■□□□□ 0.73
TDP2-202ENST00000378198 ZSWIM1Q9BR11 485 aa19.61■□□□□ 0.73
TDP2-202ENST00000378198 PPANQ9NQ55 473 aaKnown RBP19.61■□□□□ 0.73
TDP2-202ENST00000378198 TMOD4Q9NZQ9 345 aa19.61■□□□□ 0.73
TDP2-202ENST00000378198 PKD2L1Q9P0L9 805 aa19.61■□□□□ 0.73
TDP2-202ENST00000378198 TISP43B9A030 160 aa19.61■□□□□ 0.73
TDP2-202ENST00000378198 MTA2O94776 668 aa19.61■□□□□ 0.73
TDP2-202ENST00000378198 GBP1P32455 592 aa19.61■□□□□ 0.73
TDP2-202ENST00000378198 MCCD1P59942 119 aaPredicted RBP19.61■□□□□ 0.73
TDP2-202ENST00000378198 HAUS6Q7Z4H7 955 aa19.61■□□□□ 0.73
TDP2-202ENST00000378198 MCF2L2Q86YR7 1114 aa19.61■□□□□ 0.73
TDP2-202ENST00000378198 WNT8AQ9H1J5 351 aa19.61■□□□□ 0.73
TDP2-202ENST00000378198 AGO4Q9HCK5 861 aaKnown RBP19.61■□□□□ 0.73
TDP2-202ENST00000378198 UBIAD1Q9Y5Z9 338 aa19.61■□□□□ 0.73
TDP2-202ENST00000378198 RGPD3A6NKT7 1758 aaPredicted RBP19.6■□□□□ 0.73
TDP2-202ENST00000378198 RGPD4Q7Z3J3 1758 aa19.6■□□□□ 0.73
TDP2-202ENST00000378198 PAEPP09466 180 aa19.6■□□□□ 0.73
TDP2-202ENST00000378198 MXI1P50539 228 aa19.6■□□□□ 0.73
TDP2-202ENST00000378198 CDR1P51861 262 aa19.6■□□□□ 0.73
TDP2-202ENST00000378198 TKFCQ3LXA3 575 aa19.6■□□□□ 0.73
TDP2-202ENST00000378198 HOOK3Q86VS8 718 aa19.6■□□□□ 0.73
TDP2-202ENST00000378198 SLC17A8Q8NDX2 589 aa19.6■□□□□ 0.73
TDP2-202ENST00000378198 PSMD1Q99460 953 aa19.6■□□□□ 0.73
TDP2-202ENST00000378198 COL20A1Q9P218 1284 aa19.6■□□□□ 0.73
TDP2-202ENST00000378198 PCYOX1Q9UHG3 505 aa19.6■□□□□ 0.73
TDP2-202ENST00000378198 ZNF536O15090 1300 aa19.6■□□□□ 0.73
TDP2-202ENST00000378198 PODXLO00592 558 aa19.6■□□□□ 0.73
TDP2-202ENST00000378198 KIAA0391O15091 583 aaKnown RBP19.6■□□□□ 0.73
TDP2-202ENST00000378198 TRAPPC3O43617 180 aa19.6■□□□□ 0.73
TDP2-202ENST00000378198 NUDT17P0C025 328 aa19.6■□□□□ 0.73
TDP2-202ENST00000378198 CTNNA2P26232 953 aa19.6■□□□□ 0.73
TDP2-202ENST00000378198 HSPA1LP34931 641 aa19.6■□□□□ 0.73
TDP2-202ENST00000378198 COPB2P35606 906 aa19.6■□□□□ 0.73
TDP2-202ENST00000378198 GHRHRQ02643 423 aa19.6■□□□□ 0.73
TDP2-202ENST00000378198 SEL1L2Q5TEA6 688 aa19.6■□□□□ 0.73
TDP2-202ENST00000378198 FKBP1CQ5VVH2 108 aa19.6■□□□□ 0.73
TDP2-202ENST00000378198 PCNX4Q63HM2 1172 aa19.6■□□□□ 0.73
TDP2-202ENST00000378198 FAM71AQ8IYT1 594 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms