RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 CASP4P49662 377 aa15.58■□□□□ 0.08
TCOF1-202ENST00000377797 SPOUT1Q5T280 376 aaKnown RBP15.58■□□□□ 0.08
TCOF1-202ENST00000377797 HAS1Q92839 578 aa15.58■□□□□ 0.08
TCOF1-202ENST00000377797 OSBPL9Q96SU4 736 aa15.58■□□□□ 0.08
TCOF1-202ENST00000377797 PLCD4Q9BRC7 762 aa15.58■□□□□ 0.08
TCOF1-202ENST00000377797 TARS2Q9BW92 718 aaKnown RBP15.58■□□□□ 0.08
TCOF1-202ENST00000377797 KIAA0391O15091 583 aaKnown RBP15.58■□□□□ 0.08
TCOF1-202ENST00000377797 ATF2P15336 505 aa15.58■□□□□ 0.08
TCOF1-202ENST00000377797 BMP6P22004 513 aa15.58■□□□□ 0.08
TCOF1-202ENST00000377797 TCF7P36402 384 aaPredicted RBP15.58■□□□□ 0.08
TCOF1-202ENST00000377797 EPHB4P54760 987 aa15.58■□□□□ 0.08
TCOF1-202ENST00000377797 IL17AQ16552 155 aa15.58■□□□□ 0.08
TCOF1-202ENST00000377797 TMEM119Q4V9L6 283 aa15.58■□□□□ 0.08
TCOF1-202ENST00000377797 ABI1Q8IZP0 508 aa15.58■□□□□ 0.08
TCOF1-202ENST00000377797 GTF3C2Q8WUA4 911 aaPredicted RBP15.58■□□□□ 0.08
TCOF1-202ENST00000377797 VPS37BQ9H9H4 285 aa15.58■□□□□ 0.08
TCOF1-202ENST00000377797 CYP26B1Q9NR63 512 aa15.58■□□□□ 0.08
TCOF1-202ENST00000377797 ARFGEF2Q9Y6D5 1785 aa15.58■□□□□ 0.08
TCOF1-202ENST00000377797 RFC5P40937 340 aa15.58■□□□□ 0.08
TCOF1-202ENST00000377797 RWDD2BP57060 319 aa15.58■□□□□ 0.08
TCOF1-202ENST00000377797 MUM1L1Q5H9M0 696 aa15.58■□□□□ 0.08
TCOF1-202ENST00000377797 TRIM50Q86XT4 487 aa15.58■□□□□ 0.08
TCOF1-202ENST00000377797 SPATC1LQ9H0A9 340 aa15.58■□□□□ 0.08
TCOF1-202ENST00000377797 PLAGL2Q9UPG8 496 aa15.58■□□□□ 0.08
TCOF1-202ENST00000377797 A0A1W2PQJ5 194 aa15.57■□□□□ 0.08
TCOF1-202ENST00000377797 LRRD1A4D1F6 860 aa15.57■□□□□ 0.08
TCOF1-202ENST00000377797 NDUFAB1O14561 156 aa15.57■□□□□ 0.08
TCOF1-202ENST00000377797 SLITRK3O94933 977 aa15.57■□□□□ 0.08
TCOF1-202ENST00000377797 PLTPP55058 493 aa15.57■□□□□ 0.08
TCOF1-202ENST00000377797 GABPB1Q06547 395 aaPredicted RBP15.57■□□□□ 0.08
TCOF1-202ENST00000377797 CCDC14Q49A88 953 aa15.57■□□□□ 0.08
TCOF1-202ENST00000377797 GCOM2Q9BZD3 368 aaPredicted RBP15.57■□□□□ 0.08
TCOF1-202ENST00000377797 EPC1Q9H2F5 836 aa15.57■□□□□ 0.08
TCOF1-202ENST00000377797 TTLL3Q9Y4R7 772 aa15.57■□□□□ 0.08
TCOF1-202ENST00000377797 SCINQ9Y6U3 715 aa15.57■□□□□ 0.08
TCOF1-202ENST00000377797 KRT1P04264 644 aa15.57■□□□□ 0.08
TCOF1-202ENST00000377797 SLC38A10Q9HBR0 1119 aa15.57■□□□□ 0.08
TCOF1-202ENST00000377797 MRFAP1Q9Y605 127 aa15.57■□□□□ 0.08
TCOF1-202ENST00000377797 VIMP08670 466 aaKnown RBP15.57■□□□□ 0.08
TCOF1-202ENST00000377797 SNHG28P0DPA3 235 aa15.57■□□□□ 0.08
TCOF1-202ENST00000377797 CYP2B6P20813 491 aa15.57■□□□□ 0.08
TCOF1-202ENST00000377797 GNA15P30679 374 aa15.57■□□□□ 0.08
TCOF1-202ENST00000377797 MAP1SQ66K74 1059 aaPredicted RBP15.57■□□□□ 0.08
TCOF1-202ENST00000377797 PDGFDQ9GZP0 370 aaPredicted RBP15.57■□□□□ 0.08
TCOF1-202ENST00000377797 MIF4GDA9UHW6 222 aaKnown RBP15.57■□□□□ 0.08
TCOF1-202ENST00000377797 HERVK_113P62684 666 aa15.57■□□□□ 0.08
TCOF1-202ENST00000377797 KLHDC7AQ5VTJ3 777 aa15.57■□□□□ 0.08
TCOF1-202ENST00000377797 CASC4Q6P4E1 433 aa15.57■□□□□ 0.08
TCOF1-202ENST00000377797 AGPAT1Q99943 283 aa15.57■□□□□ 0.08
TCOF1-202ENST00000377797 CALN1Q9BXU9 219 aa15.57■□□□□ 0.08
TCOF1-202ENST00000377797 C17orf75Q9HAS0 396 aa15.57■□□□□ 0.08
TCOF1-202ENST00000377797 ABCB6Q9NP58 842 aa15.57■□□□□ 0.08
TCOF1-202ENST00000377797 FAM114A2Q9NRY5 505 aa15.57■□□□□ 0.08
TCOF1-202ENST00000377797 TBX20Q9UMR3 447 aa15.57■□□□□ 0.08
TCOF1-202ENST00000377797 RGS16O15492 202 aaPredicted RBP15.56■□□□□ 0.08
TCOF1-202ENST00000377797 BSPRYQ5W0U4 402 aa15.56■□□□□ 0.08
TCOF1-202ENST00000377797 ZNF720Q7Z2F6 126 aa15.56■□□□□ 0.08
TCOF1-202ENST00000377797 ANKS4BQ8N8V4 417 aa15.56■□□□□ 0.08
TCOF1-202ENST00000377797 ATP8B1O43520 1251 aa15.56■□□□□ 0.08
TCOF1-202ENST00000377797 KRT15P19012 456 aa15.56■□□□□ 0.08
TCOF1-202ENST00000377797 C4orf19Q8IY42 314 aa15.56■□□□□ 0.08
TCOF1-202ENST00000377797 RFFLQ8WZ73 363 aa15.56■□□□□ 0.08
TCOF1-202ENST00000377797 OPTNQ96CV9 577 aa15.56■□□□□ 0.08
TCOF1-202ENST00000377797 MED4Q9NPJ6 270 aa15.56■□□□□ 0.08
TCOF1-202ENST00000377797 ERAP1Q9NZ08 941 aa15.56■□□□□ 0.08
TCOF1-202ENST00000377797 H7C0C1 242 aa15.56■□□□□ 0.08
TCOF1-202ENST00000377797 ATP5OP48047 213 aa15.56■□□□□ 0.08
TCOF1-202ENST00000377797 SLC5A5Q92911 643 aa15.56■□□□□ 0.08
TCOF1-202ENST00000377797 A6NJR5 290 aa15.56■□□□□ 0.08
TCOF1-202ENST00000377797 CCDC188H7C350 402 aa15.56■□□□□ 0.08
TCOF1-202ENST00000377797 IRX5P78411 483 aaPredicted RBP15.56■□□□□ 0.08
TCOF1-202ENST00000377797 BTNL9Q6UXG8 535 aa15.56■□□□□ 0.08
TCOF1-202ENST00000377797 SH3BP5LQ7L8J4 393 aa15.56■□□□□ 0.08
TCOF1-202ENST00000377797 P2RX7Q99572 595 aaKnown RBP15.56■□□□□ 0.08
TCOF1-202ENST00000377797 LRRC4Q9HBW1 653 aa15.56■□□□□ 0.08
TCOF1-202ENST00000377797 KLRG2A4D1S0 409 aaPredicted RBP15.55■□□□□ 0.08
TCOF1-202ENST00000377797 CYP3A4P08684 503 aa15.55■□□□□ 0.08
TCOF1-202ENST00000377797 SUPT20HL2P0C7V6 817 aa15.55■□□□□ 0.08
TCOF1-202ENST00000377797 DYNLT1P63172 113 aa15.55■□□□□ 0.08
TCOF1-202ENST00000377797 ZNF564Q8TBZ8 553 aaPredicted RBP15.55■□□□□ 0.08
TCOF1-202ENST00000377797 KCNMB3Q9NPA1 279 aa15.55■□□□□ 0.08
TCOF1-202ENST00000377797 NDC80O14777 642 aa15.55■□□□□ 0.08
TCOF1-202ENST00000377797 HBP1O60381 514 aa15.55■□□□□ 0.08
TCOF1-202ENST00000377797 AKAP3O75969 853 aa15.55■□□□□ 0.08
TCOF1-202ENST00000377797 ECEL1O95672 775 aa15.55■□□□□ 0.08
TCOF1-202ENST00000377797 ABL1P00519 1130 aa15.55■□□□□ 0.08
TCOF1-202ENST00000377797 PLEKP08567 350 aaPredicted RBP15.55■□□□□ 0.08
TCOF1-202ENST00000377797 MAN1A1P33908 653 aa15.55■□□□□ 0.08
TCOF1-202ENST00000377797 RARRES1P49788 294 aa15.55■□□□□ 0.08
TCOF1-202ENST00000377797 ERVK-24P63145 666 aa15.55■□□□□ 0.08
TCOF1-202ENST00000377797 IER5Q5VY09 327 aa15.55■□□□□ 0.08
TCOF1-202ENST00000377797 CAPN12Q6ZSI9 719 aa15.55■□□□□ 0.08
TCOF1-202ENST00000377797 TAOK1Q7L7X3 1001 aa15.55■□□□□ 0.08
TCOF1-202ENST00000377797 RFX6Q8HWS3 928 aa15.55■□□□□ 0.08
TCOF1-202ENST00000377797 RUNDC3BQ96NL0 473 aa15.55■□□□□ 0.08
TCOF1-202ENST00000377797 DUSP9Q99956 384 aaKnown RBP15.55■□□□□ 0.08
TCOF1-202ENST00000377797 CBWD1Q9BRT8 395 aa15.55■□□□□ 0.08
TCOF1-202ENST00000377797 OLFML3Q9NRN5 406 aa15.55■□□□□ 0.08
TCOF1-202ENST00000377797 CXCL11O14625 94 aa15.55■□□□□ 0.08
TCOF1-202ENST00000377797 ZBTB39O15060 712 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms