RNA–Protein interactions for RNA: ENST00000377617.7

ATXN2-201, Transcript of ataxin 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATXN2, Length 4,702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-201ENST00000377617 MRPL1Q9BYD6 325 aaKnown RBP17.74■□□□□ 0.43
ATXN2-201ENST00000377617 PSMC3IPQ9P2W1 217 aaPredicted RBP17.74■□□□□ 0.43
ATXN2-201ENST00000377617 DTNAQ9Y4J8 743 aa17.74■□□□□ 0.43
ATXN2-201ENST00000377617 M0R2C6 588 aa17.74■□□□□ 0.43
ATXN2-201ENST00000377617 CALB1P05937 261 aa17.74■□□□□ 0.43
ATXN2-201ENST00000377617 KRT7P08729 469 aa17.74■□□□□ 0.43
ATXN2-201ENST00000377617 GPR141Q7Z602 305 aa17.74■□□□□ 0.43
ATXN2-201ENST00000377617 PRPF38AQ8NAV1 312 aaKnown RBP17.74■□□□□ 0.43
ATXN2-201ENST00000377617 BTBD7Q9P203 1132 aa17.74■□□□□ 0.43
ATXN2-201ENST00000377617 NFIBO00712 420 aa17.74■□□□□ 0.43
ATXN2-201ENST00000377617 TLR3O15455 904 aaKnown RBP17.74■□□□□ 0.43
ATXN2-201ENST00000377617 PCCAP05165 728 aaPredicted RBP17.74■□□□□ 0.43
ATXN2-201ENST00000377617 ERFP50548 548 aa17.74■□□□□ 0.43
ATXN2-201ENST00000377617 RAD9BQ6WBX8 426 aa17.74■□□□□ 0.43
ATXN2-201ENST00000377617 COL23A1Q86Y22 540 aaPredicted RBP17.74■□□□□ 0.43
ATXN2-201ENST00000377617 MICU2Q8IYU8 434 aa17.74■□□□□ 0.43
ATXN2-201ENST00000377617 RFWD2Q8NHY2 731 aa17.74■□□□□ 0.43
ATXN2-201ENST00000377617 POLE3Q9NRF9 147 aa17.74■□□□□ 0.43
ATXN2-201ENST00000377617 ADD3Q9UEY8 706 aaKnown RBP17.74■□□□□ 0.43
ATXN2-201ENST00000377617 TBC1D4O60343 1298 aa17.73■□□□□ 0.43
ATXN2-201ENST00000377617 SERPINB8P50452 374 aa17.73■□□□□ 0.43
ATXN2-201ENST00000377617 KCNB1Q14721 858 aa17.73■□□□□ 0.43
ATXN2-201ENST00000377617 NR1I3Q14994 352 aa17.73■□□□□ 0.43
ATXN2-201ENST00000377617 LRRC47Q8N1G4 583 aaKnown RBP17.73■□□□□ 0.43
ATXN2-201ENST00000377617 OSBP2Q969R2 916 aa17.73■□□□□ 0.43
ATXN2-201ENST00000377617 CCDC17Q96LX7 622 aa17.73■□□□□ 0.43
ATXN2-201ENST00000377617 CAAP1Q9H8G2 361 aa17.73■□□□□ 0.43
ATXN2-201ENST00000377617 POLD4Q9HCU8 107 aa17.73■□□□□ 0.43
ATXN2-201ENST00000377617 UBAP1Q9NZ09 502 aa17.73■□□□□ 0.43
ATXN2-201ENST00000377617 PZPP20742 1482 aa17.73■□□□□ 0.43
ATXN2-201ENST00000377617 PHF2O75151 1096 aa17.73■□□□□ 0.43
ATXN2-201ENST00000377617 CLPTM1O96005 669 aa17.73■□□□□ 0.43
ATXN2-201ENST00000377617 FTLP02792 175 aaPredicted RBP17.73■□□□□ 0.43
ATXN2-201ENST00000377617 DDB1Q16531 1140 aa17.73■□□□□ 0.43
ATXN2-201ENST00000377617 CC2D2BQ6DHV5 1058 aa17.73■□□□□ 0.43
ATXN2-201ENST00000377617 PACS2Q86VP3 889 aa17.73■□□□□ 0.43
ATXN2-201ENST00000377617 CCDC103Q8IW40 242 aa17.73■□□□□ 0.43
ATXN2-201ENST00000377617 MTA3Q9BTC8 594 aa17.73■□□□□ 0.43
ATXN2-201ENST00000377617 WDR7Q9Y4E6 1490 aa17.73■□□□□ 0.43
ATXN2-201ENST00000377617 SLFN13Q68D06 897 aa17.73■□□□□ 0.43
ATXN2-201ENST00000377617 C4orf50Q6ZRC1 276 aa17.73■□□□□ 0.43
ATXN2-201ENST00000377617 HDDC2Q7Z4H3 204 aa17.73■□□□□ 0.43
ATXN2-201ENST00000377617 STX19Q8N4C7 294 aa17.73■□□□□ 0.43
ATXN2-201ENST00000377617 ACAP3Q96P50 834 aa17.73■□□□□ 0.43
ATXN2-201ENST00000377617 NUP85Q9BW27 656 aa17.73■□□□□ 0.43
ATXN2-201ENST00000377617 LRCH1Q9Y2L9 728 aa17.73■□□□□ 0.43
ATXN2-201ENST00000377617 MYBL1P10243 752 aa17.73■□□□□ 0.43
ATXN2-201ENST00000377617 VCAM1P19320 739 aa17.73■□□□□ 0.43
ATXN2-201ENST00000377617 NAALADL2Q58DX5 795 aa17.73■□□□□ 0.43
ATXN2-201ENST00000377617 ARHGEF16Q5VV41 709 aa17.73■□□□□ 0.43
ATXN2-201ENST00000377617 TMC5Q6UXY8 1006 aa17.73■□□□□ 0.43
ATXN2-201ENST00000377617 SIX6OS1Q8N1H7 587 aa17.73■□□□□ 0.43
ATXN2-201ENST00000377617 GALNT4Q8N4A0 578 aa17.73■□□□□ 0.43
ATXN2-201ENST00000377617 OR2W6PQ8NHA6 318 aa17.73■□□□□ 0.43
ATXN2-201ENST00000377617 TTC8Q8TAM2 541 aa17.73■□□□□ 0.43
ATXN2-201ENST00000377617 ZWILCHQ9H900 591 aa17.73■□□□□ 0.43
ATXN2-201ENST00000377617 GPHNQ9NQX3 736 aaPredicted RBP17.73■□□□□ 0.43
ATXN2-201ENST00000377617 MYOM2P54296 1465 aa17.72■□□□□ 0.43
ATXN2-201ENST00000377617 ATP6V1G2O95670 118 aa17.72■□□□□ 0.43
ATXN2-201ENST00000377617 KRT16P08779 473 aa17.72■□□□□ 0.43
ATXN2-201ENST00000377617 PPARGP37231 505 aaPredicted RBP17.72■□□□□ 0.43
ATXN2-201ENST00000377617 ORC2Q13416 577 aaPredicted RBP17.72■□□□□ 0.43
ATXN2-201ENST00000377617 TTC33Q6PID6 262 aaPredicted RBP17.72■□□□□ 0.43
ATXN2-201ENST00000377617 PATL1Q86TB9 770 aaKnown RBP17.72■□□□□ 0.43
ATXN2-201ENST00000377617 TLK2Q86UE8 772 aa17.72■□□□□ 0.43
ATXN2-201ENST00000377617 CNBD1Q8NA66 436 aa17.72■□□□□ 0.43
ATXN2-201ENST00000377617 SLC7A3Q8WY07 619 aa17.72■□□□□ 0.43
ATXN2-201ENST00000377617 COQ7Q99807 217 aa17.72■□□□□ 0.43
ATXN2-201ENST00000377617 NDEL1Q9GZM8 345 aa17.72■□□□□ 0.43
ATXN2-201ENST00000377617 BRD8Q9H0E9 1235 aa17.72■□□□□ 0.43
ATXN2-201ENST00000377617 BFARQ9NZS9 450 aa17.72■□□□□ 0.43
ATXN2-201ENST00000377617 DBR1Q9UK59 544 aaKnown RBP17.72■□□□□ 0.43
ATXN2-201ENST00000377617 CAB39Q9Y376 341 aaPredicted RBP17.72■□□□□ 0.43
ATXN2-201ENST00000377617 DYTNA2CJ06 578 aa17.72■□□□□ 0.43
ATXN2-201ENST00000377617 ZCCHC18P0CG32 403 aa17.72■□□□□ 0.43
ATXN2-201ENST00000377617 POLA2Q14181 598 aa17.72■□□□□ 0.43
ATXN2-201ENST00000377617 LRRC34Q8IZ02 419 aa17.72■□□□□ 0.43
ATXN2-201ENST00000377617 ZNF513Q8N8E2 541 aaPredicted RBP17.72■□□□□ 0.43
ATXN2-201ENST00000377617 ZBTB38Q8NAP3 1195 aaPredicted RBP17.72■□□□□ 0.43
ATXN2-201ENST00000377617 DDX17Q92841 729 aaKnown RBP17.72■□□□□ 0.43
ATXN2-201ENST00000377617 LBHD1Q9BQE6 289 aaPredicted RBP17.72■□□□□ 0.43
ATXN2-201ENST00000377617 C15orf41Q9Y2V0 281 aa17.72■□□□□ 0.43
ATXN2-201ENST00000377617 NR3C1P04150 777 aa17.72■□□□□ 0.43
ATXN2-201ENST00000377617 LONRF1Q17RB8 773 aa17.72■□□□□ 0.43
ATXN2-201ENST00000377617 RNF25Q96BH1 459 aaPredicted RBP17.72■□□□□ 0.43
ATXN2-201ENST00000377617 RBM15Q96T37 977 aaKnown RBP eCLIP17.72■□□□□ 0.435e-6■■□□□ 11.5
ATXN2-201ENST00000377617 FAM192AQ9GZU8 254 aa17.72■□□□□ 0.43
ATXN2-201ENST00000377617 TFDP1Q14186 410 aa17.72■□□□□ 0.43
ATXN2-201ENST00000377617 DEPDC1Q5TB30 811 aa17.72■□□□□ 0.43
ATXN2-201ENST00000377617 SHC4Q6S5L8 630 aa17.72■□□□□ 0.43
ATXN2-201ENST00000377617 PCYOX1LQ8NBM8 494 aa17.72■□□□□ 0.43
ATXN2-201ENST00000377617 IL17REQ8NFR9 667 aa17.72■□□□□ 0.43
ATXN2-201ENST00000377617 MIEF2Q96C03 454 aa17.72■□□□□ 0.43
ATXN2-201ENST00000377617 ZNF577Q9BSK1 485 aa17.72■□□□□ 0.43
ATXN2-201ENST00000377617 DDX56Q9NY93 547 aaKnown RBP17.72■□□□□ 0.43
ATXN2-201ENST00000377617 PRR23D1E9PI22 279 aaPredicted RBP17.71■□□□□ 0.43
ATXN2-201ENST00000377617 PRR29P0C7W0 189 aa17.71■□□□□ 0.43
ATXN2-201ENST00000377617 PRR23D2P0DMB1 279 aaPredicted RBP17.71■□□□□ 0.43
ATXN2-201ENST00000377617 ENO3P13929 434 aaPredicted RBP17.71■□□□□ 0.43
ATXN2-201ENST00000377617 CASP1P29466 404 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms