RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 PTGISQ16647 500 aa13.94□□□□□ -0.18
USP11-204ENST00000377107 CCDC121Q6ZUS5 278 aa13.94□□□□□ -0.18
USP11-204ENST00000377107 MXRA8Q9BRK3 442 aa13.94□□□□□ -0.18
USP11-204ENST00000377107 COL20A1Q9P218 1284 aa13.94□□□□□ -0.18
USP11-204ENST00000377107 CTNND1O60716 968 aaKnown RBP13.94□□□□□ -0.18
USP11-204ENST00000377107 ENTPD3O75355 529 aa13.94□□□□□ -0.18
USP11-204ENST00000377107 ACSL3O95573 720 aa13.94□□□□□ -0.18
USP11-204ENST00000377107 SHBGP04278 402 aa13.94□□□□□ -0.18
USP11-204ENST00000377107 YWHABP31946 246 aaKnown RBP13.94□□□□□ -0.18
USP11-204ENST00000377107 JAM2P57087 298 aa13.94□□□□□ -0.18
USP11-204ENST00000377107 TRAF1Q13077 416 aa13.94□□□□□ -0.18
USP11-204ENST00000377107 LLGL2Q6P1M3 1020 aa13.94□□□□□ -0.18
USP11-204ENST00000377107 EPN3Q9H201 632 aa13.94□□□□□ -0.18
USP11-204ENST00000377107 RASAL2Q9UJF2 1139 aa13.94□□□□□ -0.18
USP11-204ENST00000377107 SPATA31A6Q5VVP1 1343 aa13.94□□□□□ -0.18
USP11-204ENST00000377107 MAST2Q6P0Q8 1798 aa13.93□□□□□ -0.18
USP11-204ENST00000377107 TCRBV7S2A1N4TA0A589 114 aa13.93□□□□□ -0.18
USP11-204ENST00000377107 ANKRD62A6NC57 917 aa13.93□□□□□ -0.18
USP11-204ENST00000377107 SPDYE2BA6NHP3 402 aa13.93□□□□□ -0.18
USP11-204ENST00000377107 HNRNPDLO14979 420 aaKnown RBP13.93□□□□□ -0.18
USP11-204ENST00000377107 EIF3DO15371 548 aaKnown RBP eCLIP13.93□□□□□ -0.18
USP11-204ENST00000377107 CAND2O75155 1236 aa13.93□□□□□ -0.18
USP11-204ENST00000377107 TMEM253P0C7T8 217 aa13.93□□□□□ -0.18
USP11-204ENST00000377107 SPDYE6P0CI01 402 aa13.93□□□□□ -0.18
USP11-204ENST00000377107 HSPA9P38646 679 aaKnown RBP13.93□□□□□ -0.18
USP11-204ENST00000377107 ARHGEF16Q5VV41 709 aa13.93□□□□□ -0.18
USP11-204ENST00000377107 ARHGAP27Q6ZUM4 889 aa13.93□□□□□ -0.18
USP11-204ENST00000377107 MICALCLQ6ZW33 695 aa13.93□□□□□ -0.18
USP11-204ENST00000377107 CYFIP1Q7L576 1253 aa13.93□□□□□ -0.18
USP11-204ENST00000377107 DAW1Q8N136 415 aa13.93□□□□□ -0.18
USP11-204ENST00000377107 SLC5A5Q92911 643 aa13.93□□□□□ -0.18
USP11-204ENST00000377107 RMDN3Q96TC7 470 aa13.93□□□□□ -0.18
USP11-204ENST00000377107 NUP85Q9BW27 656 aa13.93□□□□□ -0.18
USP11-204ENST00000377107 TMBIM4Q9HC24 238 aa13.93□□□□□ -0.18
USP11-204ENST00000377107 GGT7Q9UJ14 662 aa13.93□□□□□ -0.18
USP11-204ENST00000377107 P4HBP07237 508 aaKnown RBP13.93□□□□□ -0.18
USP11-204ENST00000377107 QARSP47897 775 aaKnown RBP13.93□□□□□ -0.18
USP11-204ENST00000377107 GTF2A1P52655 376 aaPredicted RBP13.93□□□□□ -0.18
USP11-204ENST00000377107 SF3B2Q13435 895 aaKnown RBP13.93□□□□□ -0.18
USP11-204ENST00000377107 CAPN12Q6ZSI9 719 aa13.93□□□□□ -0.18
USP11-204ENST00000377107 JAMLQ86YT9 394 aa13.93□□□□□ -0.18
USP11-204ENST00000377107 MYCBPAPQ8TBZ2 947 aa13.93□□□□□ -0.18
USP11-204ENST00000377107 PDGFDQ9GZP0 370 aaPredicted RBP13.93□□□□□ -0.18
USP11-204ENST00000377107 GSTTP1A0A1W2PQM5 241 aa13.93□□□□□ -0.18
USP11-204ENST00000377107 DENND3A2RUS2 1198 aa13.93□□□□□ -0.18
USP11-204ENST00000377107 RGS16O15492 202 aaPredicted RBP13.93□□□□□ -0.18
USP11-204ENST00000377107 SHOX2O60902 331 aaPredicted RBP13.93□□□□□ -0.18
USP11-204ENST00000377107 CYP3A4P08684 503 aa13.93□□□□□ -0.18
USP11-204ENST00000377107 TNNI1P19237 187 aa13.93□□□□□ -0.18
USP11-204ENST00000377107 HOXA7P31268 230 aaPredicted RBP13.93□□□□□ -0.18
USP11-204ENST00000377107 GPC5P78333 572 aa13.93□□□□□ -0.18
USP11-204ENST00000377107 UGCGQ16739 394 aa13.93□□□□□ -0.18
USP11-204ENST00000377107 DCAF12L1Q5VU92 463 aa13.93□□□□□ -0.18
USP11-204ENST00000377107 CCDC137Q6PK04 289 aaKnown RBP13.93□□□□□ -0.18
USP11-204ENST00000377107 KDM7AQ6ZMT4 941 aa13.93□□□□□ -0.18
USP11-204ENST00000377107 INTS8Q75QN2 995 aaKnown RBP13.93□□□□□ -0.18
USP11-204ENST00000377107 TAB3Q8N5C8 712 aaPredicted RBP13.93□□□□□ -0.18
USP11-204ENST00000377107 CEP170P1Q96L14 293 aa13.93□□□□□ -0.18
USP11-204ENST00000377107 NAP1L3Q99457 506 aaPredicted RBP13.93□□□□□ -0.18
USP11-204ENST00000377107 AZI2Q9H6S1 392 aa13.93□□□□□ -0.18
USP11-204ENST00000377107 KCNK9Q9NPC2 374 aa13.93□□□□□ -0.18
USP11-204ENST00000377107 FAM114A2Q9NRY5 505 aa13.93□□□□□ -0.18
USP11-204ENST00000377107 HERC5Q9UII4 1024 aaKnown RBP13.93□□□□□ -0.18
USP11-204ENST00000377107 ATP9AO75110 1047 aa13.92□□□□□ -0.18
USP11-204ENST00000377107 MTMR3Q13615 1198 aa13.92□□□□□ -0.18
USP11-204ENST00000377107 SLC29A2Q14542 456 aa13.92□□□□□ -0.18
USP11-204ENST00000377107 LRRC14Q15048 493 aa13.92□□□□□ -0.18
USP11-204ENST00000377107 ANKRD42Q8N9B4 389 aa13.92□□□□□ -0.18
USP11-204ENST00000377107 ATG4AQ8WYN0 398 aa13.92□□□□□ -0.18
USP11-204ENST00000377107 ADAM33Q9BZ11 813 aa13.92□□□□□ -0.18
USP11-204ENST00000377107 TBK1Q9UHD2 729 aa13.92□□□□□ -0.18
USP11-204ENST00000377107 DBR1Q9UK59 544 aaKnown RBP13.92□□□□□ -0.18
USP11-204ENST00000377107 RREB1Q92766 1687 aa13.92□□□□□ -0.18
USP11-204ENST00000377107 CLDN3O15551 220 aa13.92□□□□□ -0.18
USP11-204ENST00000377107 VIL1P09327 827 aaKnown RBP13.92□□□□□ -0.18
USP11-204ENST00000377107 SMTNP53814 917 aa13.92□□□□□ -0.18
USP11-204ENST00000377107 PPP2R5CQ13362 524 aa13.92□□□□□ -0.18
USP11-204ENST00000377107 TMC3Q7Z5M5 1100 aa13.92□□□□□ -0.18
USP11-204ENST00000377107 FAM213AQ9BRX8 229 aa13.92□□□□□ -0.18
USP11-204ENST00000377107 KMT5AQ9NQR1 393 aa13.92□□□□□ -0.18
USP11-204ENST00000377107 CNOT8Q9UFF9 292 aaKnown RBP13.92□□□□□ -0.18
USP11-204ENST00000377107 CD2APQ9Y5K6 639 aa13.92□□□□□ -0.18
USP11-204ENST00000377107 FRMPD4Q14CM0 1322 aa13.92□□□□□ -0.18
USP11-204ENST00000377107 ANKRD63C9JTQ0 380 aa13.91□□□□□ -0.18
USP11-204ENST00000377107 RPS6P62753 249 aaKnown RBP13.91□□□□□ -0.18
USP11-204ENST00000377107 PPP2R2AP63151 447 aa13.91□□□□□ -0.18
USP11-204ENST00000377107 ITGB3BPQ13352 177 aaPredicted RBP13.91□□□□□ -0.18
USP11-204ENST00000377107 BMT2Q1RMZ1 405 aa13.91□□□□□ -0.18
USP11-204ENST00000377107 HP1BP3Q5SSJ5 553 aaPredicted RBP13.91□□□□□ -0.18
USP11-204ENST00000377107 CHADLQ6NUI6 762 aa13.91□□□□□ -0.18
USP11-204ENST00000377107 ZNF564Q8TBZ8 553 aaPredicted RBP13.91□□□□□ -0.18
USP11-204ENST00000377107 CPA5Q8WXQ8 436 aa13.91□□□□□ -0.18
USP11-204ENST00000377107 RUBCNQ92622 972 aa13.91□□□□□ -0.18
USP11-204ENST00000377107 HES6Q96HZ4 224 aa13.91□□□□□ -0.18
USP11-204ENST00000377107 PAIP2Q9BPZ3 127 aaKnown RBP13.91□□□□□ -0.18
USP11-204ENST00000377107 SEMA4AQ9H3S1 761 aa13.91□□□□□ -0.18
USP11-204ENST00000377107 SLITRK6Q9H5Y7 841 aa13.91□□□□□ -0.18
USP11-204ENST00000377107 SEL1LQ9UBV2 794 aa13.91□□□□□ -0.18
USP11-204ENST00000377107 GJA3Q9Y6H8 435 aa13.91□□□□□ -0.18
USP11-204ENST00000377107 WNK3Q9BYP7 1800 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms