RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 SELENOSQ9BQE4 189 aa14.27□□□□□ -0.12
ACTN1-202ENST00000376839 LXNQ9BS40 222 aa14.27□□□□□ -0.12
ACTN1-202ENST00000376839 STRA6Q9BX79 667 aa14.27□□□□□ -0.12
ACTN1-202ENST00000376839 FAM129AQ9BZQ8 928 aa14.27□□□□□ -0.12
ACTN1-202ENST00000376839 SEMA4AQ9H3S1 761 aa14.27□□□□□ -0.12
ACTN1-202ENST00000376839 AZI2Q9H6S1 392 aa14.27□□□□□ -0.12
ACTN1-202ENST00000376839 CNOT10Q9H9A5 744 aaKnown RBP14.27□□□□□ -0.12
ACTN1-202ENST00000376839 AEBP2Q6ZN18 517 aaPredicted RBP14.27□□□□□ -0.13
ACTN1-202ENST00000376839 STXBP4Q6ZWJ1 553 aa14.27□□□□□ -0.13
ACTN1-202ENST00000376839 RPUSD2Q8IZ73 545 aaKnown RBP14.27□□□□□ -0.13
ACTN1-202ENST00000376839 CHMP6Q96FZ7 201 aa14.27□□□□□ -0.13
ACTN1-202ENST00000376839 ZSWIM1Q9BR11 485 aa14.27□□□□□ -0.13
ACTN1-202ENST00000376839 TDRD3Q9H7E2 651 aaKnown RBP14.27□□□□□ -0.13
ACTN1-202ENST00000376839 ACTR5Q9H9F9 607 aaPredicted RBP14.27□□□□□ -0.13
ACTN1-202ENST00000376839 ACP6Q9NPH0 428 aa14.27□□□□□ -0.13
ACTN1-202ENST00000376839 ODF2LQ9ULJ1 636 aa14.27□□□□□ -0.13
ACTN1-202ENST00000376839 MYH11P35749 1972 aa14.27□□□□□ -0.13
ACTN1-202ENST00000376839 SYNGAP1Q96PV0 1343 aa14.26□□□□□ -0.13
ACTN1-202ENST00000376839 SCN9AQ15858 1988 aa14.26□□□□□ -0.13
ACTN1-202ENST00000376839 ANKRD63C9JTQ0 380 aa14.26□□□□□ -0.13
ACTN1-202ENST00000376839 COMTP21964 271 aa14.26□□□□□ -0.13
ACTN1-202ENST00000376839 GCLMP48507 274 aa14.26□□□□□ -0.13
ACTN1-202ENST00000376839 MESDQ14696 234 aa14.26□□□□□ -0.13
ACTN1-202ENST00000376839 DACT2Q5SW24 774 aa14.26□□□□□ -0.13
ACTN1-202ENST00000376839 RBM26Q5T8P6 1007 aaKnown RBP14.26□□□□□ -0.13
ACTN1-202ENST00000376839 C11orf63Q6NUN7 778 aa14.26□□□□□ -0.13
ACTN1-202ENST00000376839 ACER1Q8TDN7 264 aa14.26□□□□□ -0.13
ACTN1-202ENST00000376839 PCDHB18PQ96TA0 734 aa14.26□□□□□ -0.13
ACTN1-202ENST00000376839 HAUS2Q9NVX0 235 aa14.26□□□□□ -0.13
ACTN1-202ENST00000376839 K7ENM7 598 aa14.26□□□□□ -0.13
ACTN1-202ENST00000376839 DDX39AO00148 427 aaKnown RBP14.26□□□□□ -0.13
ACTN1-202ENST00000376839 MMEP08473 750 aa14.26□□□□□ -0.13
ACTN1-202ENST00000376839 NPR1P16066 1061 aa14.26□□□□□ -0.13
ACTN1-202ENST00000376839 SCTRP47872 440 aa14.26□□□□□ -0.13
ACTN1-202ENST00000376839 STAT2P52630 851 aa14.26□□□□□ -0.13
ACTN1-202ENST00000376839 DRG2P55039 364 aaKnown RBP14.26□□□□□ -0.13
ACTN1-202ENST00000376839 HADHBP55084 474 aaKnown RBP14.26□□□□□ -0.13
ACTN1-202ENST00000376839 CEP55Q53EZ4 464 aa14.26□□□□□ -0.13
ACTN1-202ENST00000376839 PODNQ7Z5L7 613 aa14.26□□□□□ -0.13
ACTN1-202ENST00000376839 SLC9A9Q8IVB4 645 aa14.26□□□□□ -0.13
ACTN1-202ENST00000376839 ATXN2LQ8WWM7 1075 aaKnown RBP14.26□□□□□ -0.13
ACTN1-202ENST00000376839 BTBD6Q96KE9 485 aa14.26□□□□□ -0.13
ACTN1-202ENST00000376839 ZNF317Q96PQ6 595 aaPredicted RBP14.26□□□□□ -0.13
ACTN1-202ENST00000376839 CBWD1Q9BRT8 395 aa14.26□□□□□ -0.13
ACTN1-202ENST00000376839 ZNF577Q9BSK1 485 aa14.26□□□□□ -0.13
ACTN1-202ENST00000376839 YY1AP1Q9H869 796 aa14.26□□□□□ -0.13
ACTN1-202ENST00000376839 RASAL2Q9UJF2 1139 aa14.26□□□□□ -0.13
ACTN1-202ENST00000376839 PCDHA3Q9Y5H8 950 aa14.26□□□□□ -0.13
ACTN1-202ENST00000376839 ARHGEF35A5YM69 484 aa14.25□□□□□ -0.13
ACTN1-202ENST00000376839 SGPL1O95470 568 aa14.25□□□□□ -0.13
ACTN1-202ENST00000376839 POLR2MP0CAP2 368 aa14.25□□□□□ -0.13
ACTN1-202ENST00000376839 BCRP11274 1271 aa14.25□□□□□ -0.13
ACTN1-202ENST00000376839 FGFR4P22455 802 aa14.25□□□□□ -0.13
ACTN1-202ENST00000376839 C1orf220Q5T0J3 134 aa14.25□□□□□ -0.13
ACTN1-202ENST00000376839 SAMD1Q6SPF0 538 aaPredicted RBP14.25□□□□□ -0.13
ACTN1-202ENST00000376839 PLEKHO2Q8TD55 490 aa14.25□□□□□ -0.13
ACTN1-202ENST00000376839 CCT6BQ92526 530 aa14.25□□□□□ -0.13
ACTN1-202ENST00000376839 PGM2Q96G03 612 aa14.25□□□□□ -0.13
ACTN1-202ENST00000376839 JPH2Q9BR39 696 aaPredicted RBP14.25□□□□□ -0.13
ACTN1-202ENST00000376839 MTFR1LQ9H019 292 aa14.25□□□□□ -0.13
ACTN1-202ENST00000376839 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.25□□□□□ -0.13
ACTN1-202ENST00000376839 PYGMP11217 842 aa14.25□□□□□ -0.13
ACTN1-202ENST00000376839 CTNNA2P26232 953 aa14.25□□□□□ -0.13
ACTN1-202ENST00000376839 CHRNA3P32297 505 aa14.25□□□□□ -0.13
ACTN1-202ENST00000376839 MMP13P45452 471 aa14.25□□□□□ -0.13
ACTN1-202ENST00000376839 SLCO1A2P46721 670 aa14.25□□□□□ -0.13
ACTN1-202ENST00000376839 PEX5P50542 639 aa14.25□□□□□ -0.13
ACTN1-202ENST00000376839 GPC5P78333 572 aa14.25□□□□□ -0.13
ACTN1-202ENST00000376839 SETQ01105 290 aaPredicted RBP14.25□□□□□ -0.13
ACTN1-202ENST00000376839 ARMC9Q7Z3E5 817 aa14.25□□□□□ -0.13
ACTN1-202ENST00000376839 FMNL3Q8IVF7 1028 aa14.25□□□□□ -0.13
ACTN1-202ENST00000376839 UBL4BQ8N7F7 174 aa14.25□□□□□ -0.13
ACTN1-202ENST00000376839 EPS8L3Q8TE67 593 aaKnown RBP14.25□□□□□ -0.13
ACTN1-202ENST00000376839 CENPTQ96BT3 561 aa14.25□□□□□ -0.13
ACTN1-202ENST00000376839 PKD2L1Q9P0L9 805 aa14.25□□□□□ -0.13
ACTN1-202ENST00000376839 MIF4GDA9UHW6 222 aaKnown RBP14.24□□□□□ -0.13
ACTN1-202ENST00000376839 RGS16O15492 202 aaPredicted RBP14.24□□□□□ -0.13
ACTN1-202ENST00000376839 CHRNB2P17787 502 aa14.24□□□□□ -0.13
ACTN1-202ENST00000376839 MKRN4PQ13434 485 aaPredicted RBP14.24□□□□□ -0.13
ACTN1-202ENST00000376839 EPC2Q52LR7 807 aa14.24□□□□□ -0.13
ACTN1-202ENST00000376839 CCDC137Q6PK04 289 aaKnown RBP14.24□□□□□ -0.13
ACTN1-202ENST00000376839 PCYOX1Q9UHG3 505 aa14.24□□□□□ -0.13
ACTN1-202ENST00000376839 PTPN22Q9Y2R2 807 aa14.24□□□□□ -0.13
ACTN1-202ENST00000376839 CCDC169A6NNP5 214 aa14.24□□□□□ -0.13
ACTN1-202ENST00000376839 TULP1O00294 542 aaPredicted RBP14.24□□□□□ -0.13
ACTN1-202ENST00000376839 RFX1P22670 979 aa14.24□□□□□ -0.13
ACTN1-202ENST00000376839 KCNJ1P48048 391 aa14.24□□□□□ -0.13
ACTN1-202ENST00000376839 VAMP7P51809 220 aa14.24□□□□□ -0.13
ACTN1-202ENST00000376839 LLGL1Q15334 1064 aa14.24□□□□□ -0.13
ACTN1-202ENST00000376839 LACTB2Q53H82 288 aaPredicted RBP14.24□□□□□ -0.13
ACTN1-202ENST00000376839 B3GNT9Q6UX72 402 aa14.24□□□□□ -0.13
ACTN1-202ENST00000376839 NOP9Q86U38 636 aaKnown RBP14.24□□□□□ -0.13
ACTN1-202ENST00000376839 FUKQ8N0W3 1084 aa14.24□□□□□ -0.13
ACTN1-202ENST00000376839 ZKSCAN4Q969J2 545 aaPredicted RBP14.24□□□□□ -0.13
ACTN1-202ENST00000376839 HVCN1Q96D96 273 aa14.24□□□□□ -0.13
ACTN1-202ENST00000376839 GJD4Q96KN9 370 aaPredicted RBP14.24□□□□□ -0.13
ACTN1-202ENST00000376839 KCND2Q9NZV8 630 aa14.24□□□□□ -0.13
ACTN1-202ENST00000376839 SPATA31A6Q5VVP1 1343 aa14.24□□□□□ -0.13
ACTN1-202ENST00000376839 CDR1P51861 262 aa14.23□□□□□ -0.13
ACTN1-202ENST00000376839 TBC1D10BQ4KMP7 808 aaPredicted RBP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms