RNA–Protein interactions for RNA: ENST00000375887.8

TNFSF13B-201, Transcript of TNF superfamily member 13b, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNFSF13B, Length 2,582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13B-201ENST00000375887 GRHL1Q9NZI5 618 aa13.4□□□□□ -0.26
TNFSF13B-201ENST00000375887 SERPINA10Q9UK55 444 aa13.4□□□□□ -0.26
TNFSF13B-201ENST00000375887 ZBTB21Q9ULJ3 1066 aa13.4□□□□□ -0.26
TNFSF13B-201ENST00000375887 TMEM150BA6NC51 233 aa13.39□□□□□ -0.27
TNFSF13B-201ENST00000375887 DNM1LO00429 736 aa13.39□□□□□ -0.27
TNFSF13B-201ENST00000375887 ATMINO43313 823 aaPredicted RBP13.39□□□□□ -0.27
TNFSF13B-201ENST00000375887 VIL1P09327 827 aaKnown RBP13.39□□□□□ -0.27
TNFSF13B-201ENST00000375887 PAEPP09466 180 aa13.39□□□□□ -0.27
TNFSF13B-201ENST00000375887 ACTN3Q08043 901 aaPredicted RBP13.39□□□□□ -0.27
TNFSF13B-201ENST00000375887 IFFO1Q0D2I5 559 aa13.39□□□□□ -0.27
TNFSF13B-201ENST00000375887 SLC9A9Q8IVB4 645 aa13.39□□□□□ -0.27
TNFSF13B-201ENST00000375887 CCDC13Q8IYE1 715 aa13.39□□□□□ -0.27
TNFSF13B-201ENST00000375887 MASTLQ96GX5 879 aa13.39□□□□□ -0.27
TNFSF13B-201ENST00000375887 RAB17Q9H0T7 212 aa13.39□□□□□ -0.27
TNFSF13B-201ENST00000375887 GOPCQ9HD26 462 aa13.39□□□□□ -0.27
TNFSF13B-201ENST00000375887 FBXO28Q9NVF7 368 aa13.39□□□□□ -0.27
TNFSF13B-201ENST00000375887 CTTNBP2NLQ9P2B4 639 aa13.39□□□□□ -0.27
TNFSF13B-201ENST00000375887 ODF2LQ9ULJ1 636 aa13.39□□□□□ -0.27
TNFSF13B-201ENST00000375887 H0YHG0 523 aa13.39□□□□□ -0.27
TNFSF13B-201ENST00000375887 IPO5O00410 1097 aaKnown RBP13.39□□□□□ -0.27
TNFSF13B-201ENST00000375887 MMP10P09238 476 aa13.39□□□□□ -0.27
TNFSF13B-201ENST00000375887 ITGB5P18084 799 aa13.39□□□□□ -0.27
TNFSF13B-201ENST00000375887 UHMK1Q8TAS1 419 aaKnown RBP13.39□□□□□ -0.27
TNFSF13B-201ENST00000375887 SEC16BQ96JE7 1060 aa13.39□□□□□ -0.27
TNFSF13B-201ENST00000375887 PSMD1Q99460 953 aa13.39□□□□□ -0.27
TNFSF13B-201ENST00000375887 GGA2Q9UJY4 613 aa13.39□□□□□ -0.27
TNFSF13B-201ENST00000375887 DIS3Q9Y2L1 958 aaKnown RBP13.39□□□□□ -0.27
TNFSF13B-201ENST00000375887 PCDHA3Q9Y5H8 950 aa13.39□□□□□ -0.27
TNFSF13B-201ENST00000375887 ATRNL1Q5VV63 1379 aa13.39□□□□□ -0.27
TNFSF13B-201ENST00000375887 ARHGEF35A5YM69 484 aa13.38□□□□□ -0.27
TNFSF13B-201ENST00000375887 SGPL1O95470 568 aa13.38□□□□□ -0.27
TNFSF13B-201ENST00000375887 KRT13P13646 458 aa13.38□□□□□ -0.27
TNFSF13B-201ENST00000375887 CHRNB2P17787 502 aa13.38□□□□□ -0.27
TNFSF13B-201ENST00000375887 PEX5P50542 639 aa13.38□□□□□ -0.27
TNFSF13B-201ENST00000375887 AOC3Q16853 763 aa13.38□□□□□ -0.27
TNFSF13B-201ENST00000375887 PADI6Q6TGC4 694 aa13.38□□□□□ -0.27
TNFSF13B-201ENST00000375887 RPUSD2Q8IZ73 545 aaKnown RBP13.38□□□□□ -0.27
TNFSF13B-201ENST00000375887 RPTORQ8N122 1335 aa13.38□□□□□ -0.27
TNFSF13B-201ENST00000375887 BTBD6Q96KE9 485 aa13.38□□□□□ -0.27
TNFSF13B-201ENST00000375887 FAM84AQ96KN4 292 aa13.38□□□□□ -0.27
TNFSF13B-201ENST00000375887 ADAM7Q9H2U9 754 aa13.38□□□□□ -0.27
TNFSF13B-201ENST00000375887 PABPC3Q9H361 631 aaKnown RBP13.38□□□□□ -0.27
TNFSF13B-201ENST00000375887 SEMA4AQ9H3S1 761 aa13.38□□□□□ -0.27
TNFSF13B-201ENST00000375887 VCPKMTQ9H867 229 aa13.38□□□□□ -0.27
TNFSF13B-201ENST00000375887 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.38□□□□□ -0.27
TNFSF13B-201ENST00000375887 UBE4BO95155 1302 aa13.38□□□□□ -0.27
TNFSF13B-201ENST00000375887 ANKRD63C9JTQ0 380 aa13.38□□□□□ -0.27
TNFSF13B-201ENST00000375887 K7ENM7 598 aa13.38□□□□□ -0.27
TNFSF13B-201ENST00000375887 CCDC172P0C7W6 258 aa13.38□□□□□ -0.27
TNFSF13B-201ENST00000375887 PYGMP11217 842 aa13.38□□□□□ -0.27
TNFSF13B-201ENST00000375887 COMTP21964 271 aa13.38□□□□□ -0.27
TNFSF13B-201ENST00000375887 CHRNA5P30532 468 aa13.38□□□□□ -0.27
TNFSF13B-201ENST00000375887 USP8P40818 1118 aa13.38□□□□□ -0.27
TNFSF13B-201ENST00000375887 RPL21P46778 160 aaKnown RBP13.38□□□□□ -0.27
TNFSF13B-201ENST00000375887 PMS2P54278 862 aa13.38□□□□□ -0.27
TNFSF13B-201ENST00000375887 IFI35P80217 286 aaPredicted RBP13.38□□□□□ -0.27
TNFSF13B-201ENST00000375887 SLC29A2Q14542 456 aa13.38□□□□□ -0.27
TNFSF13B-201ENST00000375887 MESDQ14696 234 aa13.38□□□□□ -0.27
TNFSF13B-201ENST00000375887 TATDN2Q93075 761 aa13.38□□□□□ -0.27
TNFSF13B-201ENST00000375887 TMX4Q9H1E5 349 aaPredicted RBP13.38□□□□□ -0.27
TNFSF13B-201ENST00000375887 AFF2P51816 1311 aa13.37□□□□□ -0.27
TNFSF13B-201ENST00000375887 GOLGA6L10A0A0M3HER8 536 aa13.37□□□□□ -0.27
TNFSF13B-201ENST00000375887 TLDC2A0PJX2 215 aa13.37□□□□□ -0.27
TNFSF13B-201ENST00000375887 C5orf60A6NFR6 353 aa13.37□□□□□ -0.27
TNFSF13B-201ENST00000375887 SMIM23A6NLE4 172 aa13.37□□□□□ -0.27
TNFSF13B-201ENST00000375887 CALCAP01258 141 aa13.37□□□□□ -0.27
TNFSF13B-201ENST00000375887 DRD4P21917 467 aa13.37□□□□□ -0.27
TNFSF13B-201ENST00000375887 VAMP7P51809 220 aa13.37□□□□□ -0.27
TNFSF13B-201ENST00000375887 EPC2Q52LR7 807 aa13.37□□□□□ -0.27
TNFSF13B-201ENST00000375887 MIGA2Q7L4E1 593 aa13.37□□□□□ -0.27
TNFSF13B-201ENST00000375887 NOP9Q86U38 636 aaKnown RBP13.37□□□□□ -0.27
TNFSF13B-201ENST00000375887 RHOT2Q8IXI1 618 aa13.37□□□□□ -0.27
TNFSF13B-201ENST00000375887 NLGN1Q8N2Q7 840 aa13.37□□□□□ -0.27
TNFSF13B-201ENST00000375887 ZSWIM1Q9BR11 485 aa13.37□□□□□ -0.27
TNFSF13B-201ENST00000375887 TMX2Q9Y320 296 aa13.37□□□□□ -0.27
TNFSF13B-201ENST00000375887 RBBP6Q7Z6E9 1792 aaKnown RBP13.37□□□□□ -0.27
TNFSF13B-201ENST00000375887 FAM187AA6NFU0 413 aa13.37□□□□□ -0.27
TNFSF13B-201ENST00000375887 ENTPD3O75355 529 aa13.37□□□□□ -0.27
TNFSF13B-201ENST00000375887 NUDT17P0C025 328 aa13.37□□□□□ -0.27
TNFSF13B-201ENST00000375887 BCRP11274 1271 aa13.37□□□□□ -0.27
TNFSF13B-201ENST00000375887 PDE6BP35913 854 aa13.37□□□□□ -0.27
TNFSF13B-201ENST00000375887 HADHBP55084 474 aaKnown RBP13.37□□□□□ -0.27
TNFSF13B-201ENST00000375887 DGKZQ13574 1117 aa13.37□□□□□ -0.27
TNFSF13B-201ENST00000375887 GRIPAP1Q4V328 841 aa13.37□□□□□ -0.27
TNFSF13B-201ENST00000375887 STXBP4Q6ZWJ1 553 aa13.37□□□□□ -0.27
TNFSF13B-201ENST00000375887 IL31RAQ8NI17 732 aa13.37□□□□□ -0.27
TNFSF13B-201ENST00000375887 NAP1L3Q99457 506 aaPredicted RBP13.37□□□□□ -0.27
TNFSF13B-201ENST00000375887 GLIS2Q9BZE0 524 aaPredicted RBP13.37□□□□□ -0.27
TNFSF13B-201ENST00000375887 WDR11Q9BZH6 1224 aa13.37□□□□□ -0.27
TNFSF13B-201ENST00000375887 MTFR1LQ9H019 292 aa13.37□□□□□ -0.27
TNFSF13B-201ENST00000375887 RANBP17Q9H2T7 1088 aaKnown RBP13.37□□□□□ -0.27
TNFSF13B-201ENST00000375887 KCND2Q9NZV8 630 aa13.37□□□□□ -0.27
TNFSF13B-201ENST00000375887 COL20A1Q9P218 1284 aa13.37□□□□□ -0.27
TNFSF13B-201ENST00000375887 SPATA31A6Q5VVP1 1343 aa13.36□□□□□ -0.27
TNFSF13B-201ENST00000375887 PHF2O75151 1096 aa13.36□□□□□ -0.27
TNFSF13B-201ENST00000375887 KCNJ1P48048 391 aa13.36□□□□□ -0.27
TNFSF13B-201ENST00000375887 MNAT1P51948 309 aa13.36□□□□□ -0.27
TNFSF13B-201ENST00000375887 DRG2P55039 364 aaKnown RBP13.36□□□□□ -0.27
TNFSF13B-201ENST00000375887 EIF3BP55884 814 aaKnown RBP13.36□□□□□ -0.27
TNFSF13B-201ENST00000375887 FKBP1AP62942 108 aaKnown RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms