RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 MCTP1Q6DN14 999 aa13.59□□□□□ -0.23
LSM2-208ENST00000375661 MOXD1Q6UVY6 613 aa13.59□□□□□ -0.23
LSM2-208ENST00000375661 GLB1LQ6UWU2 654 aa13.59□□□□□ -0.23
LSM2-208ENST00000375661 ERMP1Q7Z2K6 904 aa13.59□□□□□ -0.23
LSM2-208ENST00000375661 NEK8Q86SG6 692 aa13.59□□□□□ -0.23
LSM2-208ENST00000375661 ZNF410Q86VK4 478 aa13.59□□□□□ -0.23
LSM2-208ENST00000375661 RDM1Q8NG50 284 aa13.59□□□□□ -0.23
LSM2-208ENST00000375661 NKD2Q969F2 451 aaPredicted RBP13.59□□□□□ -0.23
LSM2-208ENST00000375661 IGSF21Q96ID5 467 aa13.59□□□□□ -0.23
LSM2-208ENST00000375661 RIT2Q99578 217 aa13.59□□□□□ -0.23
LSM2-208ENST00000375661 LIMD1Q9UGP4 676 aa13.59□□□□□ -0.23
LSM2-208ENST00000375661 CFAP54Q96N23 3096 aa13.59□□□□□ -0.23
LSM2-208ENST00000375661 ZFHX2Q9C0A1 2572 aaPredicted RBP13.59□□□□□ -0.23
LSM2-208ENST00000375661 VPS37CA5D8V6 355 aaPredicted RBP13.58□□□□□ -0.24
LSM2-208ENST00000375661 NT5C1B-RDH14C9J2C7 533 aa13.58□□□□□ -0.24
LSM2-208ENST00000375661 STX6O43752 255 aa13.58□□□□□ -0.24
LSM2-208ENST00000375661 ZNF623O75123 536 aa13.58□□□□□ -0.24
LSM2-208ENST00000375661 ZC3H11AO75152 810 aaKnown RBP eCLIP13.58□□□□□ -0.24
LSM2-208ENST00000375661 EPCAMP16422 314 aa13.58□□□□□ -0.24
LSM2-208ENST00000375661 AOC1P19801 751 aa13.58□□□□□ -0.24
LSM2-208ENST00000375661 DNM2P50570 870 aa13.58□□□□□ -0.24
LSM2-208ENST00000375661 RAB27AP51159 221 aa13.58□□□□□ -0.24
LSM2-208ENST00000375661 GNL2Q13823 731 aaKnown RBP13.58□□□□□ -0.24
LSM2-208ENST00000375661 Q4G0T1 1027 aa13.58□□□□□ -0.24
LSM2-208ENST00000375661 PPP4R3AQ6IN85 833 aa13.58□□□□□ -0.24
LSM2-208ENST00000375661 CCDC149Q6ZUS6 474 aa13.58□□□□□ -0.24
LSM2-208ENST00000375661 OTOP3Q7RTS5 596 aa13.58□□□□□ -0.24
LSM2-208ENST00000375661 GPR149Q86SP6 731 aa13.58□□□□□ -0.24
LSM2-208ENST00000375661 CABP7Q86V35 215 aa13.58□□□□□ -0.24
LSM2-208ENST00000375661 C12orf76Q8N812 135 aaPredicted RBP13.58□□□□□ -0.24
LSM2-208ENST00000375661 RTP3Q9BQQ7 232 aa13.58□□□□□ -0.24
LSM2-208ENST00000375661 TEKT3Q9BXF9 490 aa13.58□□□□□ -0.24
LSM2-208ENST00000375661 NIFKQ9BYG3 293 aaKnown RBP13.58□□□□□ -0.24
LSM2-208ENST00000375661 RBM19Q9Y4C8 960 aaKnown RBP13.58□□□□□ -0.24
LSM2-208ENST00000375661 MTCL1Q9Y4B5 1905 aaKnown RBP13.58□□□□□ -0.24
LSM2-208ENST00000375661 FAM186AA6NE01 2351 aa13.58□□□□□ -0.24
LSM2-208ENST00000375661 MSH4O15457 936 aa13.57□□□□□ -0.24
LSM2-208ENST00000375661 SLC37A4O43826 429 aa13.57□□□□□ -0.24
LSM2-208ENST00000375661 GAS7O60861 476 aa13.57□□□□□ -0.24
LSM2-208ENST00000375661 GALTP07902 379 aa13.57□□□□□ -0.24
LSM2-208ENST00000375661 WEE2P0C1S8 567 aa13.57□□□□□ -0.24
LSM2-208ENST00000375661 FGFR4P22455 802 aa13.57□□□□□ -0.24
LSM2-208ENST00000375661 TOB1P50616 345 aaPredicted RBP13.57□□□□□ -0.24
LSM2-208ENST00000375661 TDGQ13569 410 aa13.57□□□□□ -0.24
LSM2-208ENST00000375661 NOMO2Q5JPE7 1267 aa13.57□□□□□ -0.24
LSM2-208ENST00000375661 CWF19L1Q69YN2 538 aaKnown RBP13.57□□□□□ -0.24
LSM2-208ENST00000375661 TWF2Q6IBS0 349 aaKnown RBP13.57□□□□□ -0.24
LSM2-208ENST00000375661 C15orf39Q6ZRI6 1047 aa13.57□□□□□ -0.24
LSM2-208ENST00000375661 FERMT3Q86UX7 667 aa13.57□□□□□ -0.24
LSM2-208ENST00000375661 TMEM173Q86WV6 379 aaPredicted RBP13.57□□□□□ -0.24
LSM2-208ENST00000375661 SLC5A5Q92911 643 aa13.57□□□□□ -0.24
LSM2-208ENST00000375661 EMILIN2Q9BXX0 1053 aa13.57□□□□□ -0.24
LSM2-208ENST00000375661 SMOC2Q9H3U7 446 aa13.57□□□□□ -0.24
LSM2-208ENST00000375661 NRDE2Q9H7Z3 1164 aa13.57□□□□□ -0.24
LSM2-208ENST00000375661 FAM105AQ9NUU6 356 aa13.57□□□□□ -0.24
LSM2-208ENST00000375661 TBC1D13Q9NVG8 400 aa13.57□□□□□ -0.24
LSM2-208ENST00000375661 DUSP12Q9UNI6 340 aa13.57□□□□□ -0.24
LSM2-208ENST00000375661 PTPRZ1P23471 2315 aaPredicted RBP13.57□□□□□ -0.24
LSM2-208ENST00000375661 IGKV6-21A0A0C4DH24 114 aa13.56□□□□□ -0.24
LSM2-208ENST00000375661 CCNT1O60563 726 aaKnown RBP13.56□□□□□ -0.24
LSM2-208ENST00000375661 OFD1O75665 1012 aa13.56□□□□□ -0.24
LSM2-208ENST00000375661 ATP2B1P20020 1258 aa13.56□□□□□ -0.24
LSM2-208ENST00000375661 RNASELQ05823 741 aaKnown RBP13.56□□□□□ -0.24
LSM2-208ENST00000375661 RESTQ13127 1097 aa13.56□□□□□ -0.24
LSM2-208ENST00000375661 PKP1Q13835 747 aa13.56□□□□□ -0.24
LSM2-208ENST00000375661 PTPN14Q15678 1187 aa13.56□□□□□ -0.24
LSM2-208ENST00000375661 UGCGQ16739 394 aa13.56□□□□□ -0.24
LSM2-208ENST00000375661 XKR3Q5GH77 459 aa13.56□□□□□ -0.24
LSM2-208ENST00000375661 LRCH2Q5VUJ6 765 aa13.56□□□□□ -0.24
LSM2-208ENST00000375661 CYP26C1Q6V0L0 522 aa13.56□□□□□ -0.24
LSM2-208ENST00000375661 FRMD5Q7Z6J6 570 aa13.56□□□□□ -0.24
LSM2-208ENST00000375661 CCDC105Q8IYK2 499 aa13.56□□□□□ -0.24
LSM2-208ENST00000375661 AUTS2Q8WXX7 1259 aa13.56□□□□□ -0.24
LSM2-208ENST00000375661 GJA10Q969M2 543 aa13.56□□□□□ -0.24
LSM2-208ENST00000375661 PGBD4Q96DM1 585 aa13.56□□□□□ -0.24
LSM2-208ENST00000375661 ZNF668Q96K58 619 aaPredicted RBP13.56□□□□□ -0.24
LSM2-208ENST00000375661 JPH2Q9BR39 696 aaPredicted RBP13.56□□□□□ -0.24
LSM2-208ENST00000375661 RHOBTB2Q9BYZ6 727 aa13.56□□□□□ -0.24
LSM2-208ENST00000375661 IGSF9Q9P2J2 1179 aa13.56□□□□□ -0.24
LSM2-208ENST00000375661 DDX25Q9UHL0 483 aaKnown RBP13.56□□□□□ -0.24
LSM2-208ENST00000375661 TDRD15B5MCY1 1934 aaKnown RBP13.55□□□□□ -0.24
LSM2-208ENST00000375661 A0A087WZ62 844 aa13.55□□□□□ -0.24
LSM2-208ENST00000375661 GCFC2P16383 781 aaKnown RBP13.55□□□□□ -0.24
LSM2-208ENST00000375661 NPR3P17342 541 aa13.55□□□□□ -0.24
LSM2-208ENST00000375661 ANP32AP39687 249 aaKnown RBP13.55□□□□□ -0.24
LSM2-208ENST00000375661 TRAPPC10P48553 1259 aa13.55□□□□□ -0.24
LSM2-208ENST00000375661 CLCN4P51793 760 aa13.55□□□□□ -0.24
LSM2-208ENST00000375661 DRP2Q13474 957 aa13.55□□□□□ -0.24
LSM2-208ENST00000375661 NBR1Q14596 966 aa13.55□□□□□ -0.24
LSM2-208ENST00000375661 TTC38Q5R3I4 469 aa13.55□□□□□ -0.24
LSM2-208ENST00000375661 TMC5Q6UXY8 1006 aa13.55□□□□□ -0.24
LSM2-208ENST00000375661 FLCNQ8NFG4 579 aa13.55□□□□□ -0.24
LSM2-208ENST00000375661 CMASQ8NFW8 434 aaPredicted RBP13.55□□□□□ -0.24
LSM2-208ENST00000375661 ETNPPLQ8TBG4 499 aa13.55□□□□□ -0.24
LSM2-208ENST00000375661 URGCPQ8TCY9 931 aa13.55□□□□□ -0.24
LSM2-208ENST00000375661 KLHL5Q96PQ7 755 aa13.55□□□□□ -0.24
LSM2-208ENST00000375661 CEP89Q96ST8 783 aa13.55□□□□□ -0.24
LSM2-208ENST00000375661 NAP1L4Q99733 375 aaKnown RBP13.55□□□□□ -0.24
LSM2-208ENST00000375661 FDXACB1Q9BRP7 624 aaPredicted RBP13.55□□□□□ -0.24
LSM2-208ENST00000375661 TMEM175Q9BSA9 504 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms