RNA–Protein interactions for RNA: ENST00000375271.4

PTCH1-202, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-202ENST00000375271 HACE1Q8IYU2 909 aa15.81■□□□□ 0.12
PTCH1-202ENST00000375271 BCL7CQ8WUZ0 217 aaPredicted RBP15.81■□□□□ 0.12
PTCH1-202ENST00000375271 PSPC1Q8WXF1 523 aaKnown RBP15.81■□□□□ 0.12
PTCH1-202ENST00000375271 SH3GLB2Q9NR46 395 aa15.81■□□□□ 0.12
PTCH1-202ENST00000375271 AGPAT5Q9NUQ2 364 aa15.81■□□□□ 0.12
PTCH1-202ENST00000375271 PRG3Q9Y2Y8 225 aaPredicted RBP15.81■□□□□ 0.12
PTCH1-202ENST00000375271 POMCP01189 267 aa15.8■□□□□ 0.12
PTCH1-202ENST00000375271 SRGAP2CP0DJJ0 459 aa15.8■□□□□ 0.12
PTCH1-202ENST00000375271 ITGA4P13612 1032 aa15.8■□□□□ 0.12
PTCH1-202ENST00000375271 CPA1P15085 419 aa15.8■□□□□ 0.12
PTCH1-202ENST00000375271 PSMA5P28066 241 aa15.8■□□□□ 0.12
PTCH1-202ENST00000375271 GLUD2P49448 558 aa15.8■□□□□ 0.12
PTCH1-202ENST00000375271 SSRP1Q08945 709 aaKnown RBP15.8■□□□□ 0.12
PTCH1-202ENST00000375271 Q4G0T1 1027 aa15.8■□□□□ 0.12
PTCH1-202ENST00000375271 CPLX2Q6PUV4 134 aaKnown RBP15.8■□□□□ 0.12
PTCH1-202ENST00000375271 CYP26C1Q6V0L0 522 aa15.8■□□□□ 0.12
PTCH1-202ENST00000375271 SRGAP1Q7Z6B7 1085 aa15.8■□□□□ 0.12
PTCH1-202ENST00000375271 ZNF280BQ86YH2 543 aa15.8■□□□□ 0.12
PTCH1-202ENST00000375271 KSR1Q8IVT5 923 aa15.8■□□□□ 0.12
PTCH1-202ENST00000375271 CNNM3Q8NE01 707 aa15.8■□□□□ 0.12
PTCH1-202ENST00000375271 GJA10Q969M2 543 aa15.8■□□□□ 0.12
PTCH1-202ENST00000375271 CEP170P1Q96L14 293 aa15.8■□□□□ 0.12
PTCH1-202ENST00000375271 CCDC43Q96MW1 224 aaKnown RBP15.8■□□□□ 0.12
PTCH1-202ENST00000375271 TRIM6Q9C030 488 aaPredicted RBP15.8■□□□□ 0.12
PTCH1-202ENST00000375271 SEMA4AQ9H3S1 761 aa15.8■□□□□ 0.12
PTCH1-202ENST00000375271 DDX25Q9UHL0 483 aaKnown RBP15.8■□□□□ 0.12
PTCH1-202ENST00000375271 CLUHO75153 1309 aa15.79■□□□□ 0.12
PTCH1-202ENST00000375271 CCDC195A0A1B0GUA6 201 aa15.79■□□□□ 0.12
PTCH1-202ENST00000375271 MEIS3P2A8K0S8 358 aa15.79■□□□□ 0.12
PTCH1-202ENST00000375271 NRP1O14786 923 aa15.79■□□□□ 0.12
PTCH1-202ENST00000375271 ADAMTS3O15072 1205 aa15.79■□□□□ 0.12
PTCH1-202ENST00000375271 INPPL1O15357 1258 aa15.79■□□□□ 0.12
PTCH1-202ENST00000375271 PSMD10O75832 226 aa15.79■□□□□ 0.12
PTCH1-202ENST00000375271 TDP2O95551 362 aa15.79■□□□□ 0.12
PTCH1-202ENST00000375271 SOD2P04179 222 aa15.79■□□□□ 0.12
PTCH1-202ENST00000375271 IFNAR1P17181 557 aa15.79■□□□□ 0.12
PTCH1-202ENST00000375271 CCT2P78371 535 aaKnown RBP15.79■□□□□ 0.12
PTCH1-202ENST00000375271 PLA2G4FQ68DD2 849 aa15.79■□□□□ 0.12
PTCH1-202ENST00000375271 CMASQ8NFW8 434 aaPredicted RBP15.79■□□□□ 0.12
PTCH1-202ENST00000375271 TCP11Q8WWU5 503 aa15.79■□□□□ 0.12
PTCH1-202ENST00000375271 SMG7Q92540 1137 aaKnown RBP15.79■□□□□ 0.12
PTCH1-202ENST00000375271 HERC2P3Q9BVR0 1158 aa15.79■□□□□ 0.12
PTCH1-202ENST00000375271 WNT16Q9UBV4 365 aa15.79■□□□□ 0.12
PTCH1-202ENST00000375271 CA14Q9ULX7 337 aa15.79■□□□□ 0.12
PTCH1-202ENST00000375271 PCDHA4Q9UN74 947 aa15.79■□□□□ 0.12
PTCH1-202ENST00000375271 FAM186AA6NE01 2351 aa15.79■□□□□ 0.12
PTCH1-202ENST00000375271 NID2Q14112 1375 aa15.78■□□□□ 0.12
PTCH1-202ENST00000375271 IGKV6-21A0A0C4DH24 114 aa15.78■□□□□ 0.12
PTCH1-202ENST00000375271 PI15O43692 258 aa15.78■□□□□ 0.12
PTCH1-202ENST00000375271 GAS2O43903 313 aaKnown RBP15.78■□□□□ 0.12
PTCH1-202ENST00000375271 LMNAP02545 664 aaKnown RBP15.78■□□□□ 0.12
PTCH1-202ENST00000375271 RFC5P40937 340 aa15.78■□□□□ 0.12
PTCH1-202ENST00000375271 QARSP47897 775 aaKnown RBP15.78■□□□□ 0.12
PTCH1-202ENST00000375271 OTUD6AQ7L8S5 288 aa15.78■□□□□ 0.12
PTCH1-202ENST00000375271 NXPE3Q969Y0 559 aa15.78■□□□□ 0.12
PTCH1-202ENST00000375271 RPS6KC1Q96S38 1066 aa15.78■□□□□ 0.12
PTCH1-202ENST00000375271 BMP2KQ9NSY1 1161 aaPredicted RBP15.78■□□□□ 0.12
PTCH1-202ENST00000375271 PPME1Q9Y570 386 aa15.78■□□□□ 0.12
PTCH1-202ENST00000375271 RIF1Q5UIP0 2472 aaKnown RBP15.77■□□□□ 0.12
PTCH1-202ENST00000375271 DDHD2O94830 711 aa15.77■□□□□ 0.12
PTCH1-202ENST00000375271 MYBP10242 640 aa15.77■□□□□ 0.12
PTCH1-202ENST00000375271 CREMQ03060 361 aa15.77■□□□□ 0.12
PTCH1-202ENST00000375271 SPECC1Q5M775 1068 aa15.77■□□□□ 0.12
PTCH1-202ENST00000375271 MOXD1Q6UVY6 613 aa15.77■□□□□ 0.12
PTCH1-202ENST00000375271 AGMOQ6ZNB7 445 aa15.77■□□□□ 0.12
PTCH1-202ENST00000375271 BLIDQ8IZY5 108 aa15.77■□□□□ 0.12
PTCH1-202ENST00000375271 COLEC11Q9BWP8 271 aa15.77■□□□□ 0.12
PTCH1-202ENST00000375271 APOL6Q9BWW8 343 aa15.77■□□□□ 0.12
PTCH1-202ENST00000375271 WDR6Q9NNW5 1121 aaKnown RBP15.77■□□□□ 0.12
PTCH1-202ENST00000375271 VPS13AQ96RL7 3174 aa15.77■□□□□ 0.12
PTCH1-202ENST00000375271 C2orf16Q68DN1 1984 aa15.76■□□□□ 0.11
PTCH1-202ENST00000375271 SPTBN4Q9H254 2564 aa15.76■□□□□ 0.11
PTCH1-202ENST00000375271 CCDC194A0A1B0GVG4 234 aa15.76■□□□□ 0.11
PTCH1-202ENST00000375271 TEX28O15482 410 aa15.76■□□□□ 0.11
PTCH1-202ENST00000375271 ASAP2O43150 1006 aa15.76■□□□□ 0.11
PTCH1-202ENST00000375271 NARSO43776 548 aaKnown RBP15.76■□□□□ 0.11
PTCH1-202ENST00000375271 DEXIO95424 95 aa15.76■□□□□ 0.11
PTCH1-202ENST00000375271 SRFP11831 508 aa15.76■□□□□ 0.11
PTCH1-202ENST00000375271 NPR3P17342 541 aa15.76■□□□□ 0.11
PTCH1-202ENST00000375271 NCLP19338 710 aaKnown RBP15.76■□□□□ 0.11
PTCH1-202ENST00000375271 RPS6KB1P23443 525 aa15.76■□□□□ 0.11
PTCH1-202ENST00000375271 NPEPPSP55786 919 aa15.76■□□□□ 0.11
PTCH1-202ENST00000375271 LAMTOR4Q0VGL1 99 aa15.76■□□□□ 0.11
PTCH1-202ENST00000375271 TFDP1Q14186 410 aa15.76■□□□□ 0.11
PTCH1-202ENST00000375271 GALNT17Q6IS24 598 aa15.76■□□□□ 0.11
PTCH1-202ENST00000375271 NOTUMQ6P988 496 aa15.76■□□□□ 0.11
PTCH1-202ENST00000375271 ANO5Q75V66 913 aa15.76■□□□□ 0.11
PTCH1-202ENST00000375271 GET4Q7L5D6 327 aaPredicted RBP15.76■□□□□ 0.11
PTCH1-202ENST00000375271 KRT25Q7Z3Z0 450 aa15.76■□□□□ 0.11
PTCH1-202ENST00000375271 RNF149Q8NC42 400 aa15.76■□□□□ 0.11
PTCH1-202ENST00000375271 PRPF31Q8WWY3 499 aaKnown RBP15.76■□□□□ 0.11
PTCH1-202ENST00000375271 RIN2Q8WYP3 895 aaPredicted RBP15.76■□□□□ 0.11
PTCH1-202ENST00000375271 TMEM143Q96AN5 459 aa15.76■□□□□ 0.11
PTCH1-202ENST00000375271 VN1R3Q9BXE9 311 aa15.76■□□□□ 0.11
PTCH1-202ENST00000375271 PLEKHA4Q9H4M7 779 aa15.76■□□□□ 0.11
PTCH1-202ENST00000375271 TBC1D17Q9HA65 648 aa15.76■□□□□ 0.11
PTCH1-202ENST00000375271 NCOA5Q9HCD5 579 aaKnown RBP15.76■□□□□ 0.11
PTCH1-202ENST00000375271 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.76■□□□□ 0.11
PTCH1-202ENST00000375271 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.76■□□□□ 0.11
PTCH1-202ENST00000375271 CYP3A7-CYP3A51PA0A087WV96 503 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms