RNA–Protein interactions for RNA: ENST00000374949.2

HLA-DQA1-202, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,060 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-202ENST00000374949 ECM1Q16610 540 aa12.12□□□□□ -0.47
HLA-DQA1-202ENST00000374949 ANO6Q4KMQ2 910 aa12.12□□□□□ -0.47
HLA-DQA1-202ENST00000374949 IER5Q5VY09 327 aa12.12□□□□□ -0.47
HLA-DQA1-202ENST00000374949 B3GNT9Q6UX72 402 aa12.12□□□□□ -0.47
HLA-DQA1-202ENST00000374949 MIER3Q7Z3K6 550 aa12.12□□□□□ -0.47
HLA-DQA1-202ENST00000374949 CATSPER3Q86XQ3 398 aa12.12□□□□□ -0.47
HLA-DQA1-202ENST00000374949 SPATA20Q8TB22 786 aa12.12□□□□□ -0.47
HLA-DQA1-202ENST00000374949 RAD54LQ92698 747 aa12.12□□□□□ -0.47
HLA-DQA1-202ENST00000374949 STAMQ92783 540 aa12.12□□□□□ -0.47
HLA-DQA1-202ENST00000374949 EDAQ92838 391 aa12.12□□□□□ -0.47
HLA-DQA1-202ENST00000374949 GSDMAQ96QA5 445 aa12.12□□□□□ -0.47
HLA-DQA1-202ENST00000374949 HSD17B14Q9BPX1 270 aa12.12□□□□□ -0.47
HLA-DQA1-202ENST00000374949 FTHL17Q9BXU8 183 aa12.12□□□□□ -0.47
HLA-DQA1-202ENST00000374949 GRPEL1Q9HAV7 217 aa12.12□□□□□ -0.47
HLA-DQA1-202ENST00000374949 TUFT1Q9NNX1 390 aa12.12□□□□□ -0.47
HLA-DQA1-202ENST00000374949 KBTBD4Q9NVX7 518 aa12.12□□□□□ -0.47
HLA-DQA1-202ENST00000374949 TCEAL9Q9UHQ7 104 aa12.12□□□□□ -0.47
HLA-DQA1-202ENST00000374949 PADI3Q9ULW8 664 aa12.12□□□□□ -0.47
HLA-DQA1-202ENST00000374949 KIAA1024Q9UPX6 916 aa12.12□□□□□ -0.47
HLA-DQA1-202ENST00000374949 DNM3Q9UQ16 869 aa12.12□□□□□ -0.47
HLA-DQA1-202ENST00000374949 USP15Q9Y4E8 981 aaPredicted RBP12.12□□□□□ -0.47
HLA-DQA1-202ENST00000374949 CACNA1HO95180 2353 aa12.12□□□□□ -0.47
HLA-DQA1-202ENST00000374949 IGSF9BQ9UPX0 1349 aa12.11□□□□□ -0.47
HLA-DQA1-202ENST00000374949 RRN3P2A6NIE6 340 aa12.11□□□□□ -0.47
HLA-DQA1-202ENST00000374949 DDX39AO00148 427 aaKnown RBP12.11□□□□□ -0.47
HLA-DQA1-202ENST00000374949 BIN1O00499 593 aa12.11□□□□□ -0.47
HLA-DQA1-202ENST00000374949 CHMP2AO43633 222 aa12.11□□□□□ -0.47
HLA-DQA1-202ENST00000374949 SLITRK3O94933 977 aa12.11□□□□□ -0.47
HLA-DQA1-202ENST00000374949 EYA4O95677 639 aa12.11□□□□□ -0.47
HLA-DQA1-202ENST00000374949 STAG3L1P0CL83 205 aa12.11□□□□□ -0.47
HLA-DQA1-202ENST00000374949 SPATA31C1P0DKV0 1188 aa12.11□□□□□ -0.47
HLA-DQA1-202ENST00000374949 KRT76Q01546 638 aa12.11□□□□□ -0.47
HLA-DQA1-202ENST00000374949 COASYQ13057 564 aa12.11□□□□□ -0.47
HLA-DQA1-202ENST00000374949 CUL4BQ13620 913 aa12.11□□□□□ -0.47
HLA-DQA1-202ENST00000374949 PLCB4Q15147 1175 aa12.11□□□□□ -0.47
HLA-DQA1-202ENST00000374949 IER5LQ5T953 404 aa12.11□□□□□ -0.47
HLA-DQA1-202ENST00000374949 TRIM67Q6ZTA4 783 aa12.11□□□□□ -0.47
HLA-DQA1-202ENST00000374949 TRIML1Q8N9V2 468 aa12.11□□□□□ -0.47
HLA-DQA1-202ENST00000374949 LARP4BQ92615 738 aaKnown RBP12.11□□□□□ -0.47
HLA-DQA1-202ENST00000374949 DYDC2Q96IM9 177 aa12.11□□□□□ -0.47
HLA-DQA1-202ENST00000374949 MTRQ99707 1265 aa12.11□□□□□ -0.47
HLA-DQA1-202ENST00000374949 C7orf25Q9BPX7 421 aa12.11□□□□□ -0.47
HLA-DQA1-202ENST00000374949 NAT10Q9H0A0 1025 aaKnown RBP12.11□□□□□ -0.47
HLA-DQA1-202ENST00000374949 TMX1Q9H3N1 280 aa12.11□□□□□ -0.47
HLA-DQA1-202ENST00000374949 AZI2Q9H6S1 392 aa12.11□□□□□ -0.47
HLA-DQA1-202ENST00000374949 BLOC1S4Q9NUP1 217 aa12.11□□□□□ -0.47
HLA-DQA1-202ENST00000374949 RMND1Q9NWS8 449 aa12.11□□□□□ -0.47
HLA-DQA1-202ENST00000374949 HCSTQ9UBK5 93 aa12.11□□□□□ -0.47
HLA-DQA1-202ENST00000374949 SLC9A2Q9UBY0 812 aa12.11□□□□□ -0.47
HLA-DQA1-202ENST00000374949 MAN1B1Q9UKM7 699 aa12.11□□□□□ -0.47
HLA-DQA1-202ENST00000374949 LRFN2Q9ULH4 789 aa12.11□□□□□ -0.47
HLA-DQA1-202ENST00000374949 NFASCO94856 1347 aa12.11□□□□□ -0.47
HLA-DQA1-202ENST00000374949 LOC730098B7Z3J9 87 aa12.1□□□□□ -0.47
HLA-DQA1-202ENST00000374949 E9PMD0 336 aa12.1□□□□□ -0.47
HLA-DQA1-202ENST00000374949 RPN1P04843 607 aaKnown RBP12.1□□□□□ -0.47
HLA-DQA1-202ENST00000374949 P4HBP07237 508 aaKnown RBP12.1□□□□□ -0.47
HLA-DQA1-202ENST00000374949 CASP1P29466 404 aa12.1□□□□□ -0.47
HLA-DQA1-202ENST00000374949 SFNP31947 248 aa12.1□□□□□ -0.47
HLA-DQA1-202ENST00000374949 JAK3P52333 1124 aa12.1□□□□□ -0.47
HLA-DQA1-202ENST00000374949 ACTR2P61160 394 aa12.1□□□□□ -0.47
HLA-DQA1-202ENST00000374949 MORC3Q14149 939 aa12.1□□□□□ -0.47
HLA-DQA1-202ENST00000374949 DHX8Q14562 1220 aaKnown RBP12.1□□□□□ -0.47
HLA-DQA1-202ENST00000374949 MCM6Q14566 821 aa12.1□□□□□ -0.47
HLA-DQA1-202ENST00000374949 ISM2Q6H9L7 571 aa12.1□□□□□ -0.47
HLA-DQA1-202ENST00000374949 ZNF746Q6NUN9 644 aaPredicted RBP12.1□□□□□ -0.47
HLA-DQA1-202ENST00000374949 TPH2Q8IWU9 490 aa12.1□□□□□ -0.47
HLA-DQA1-202ENST00000374949 VN1R2Q8NFZ6 395 aa12.1□□□□□ -0.47
HLA-DQA1-202ENST00000374949 RDM1Q8NG50 284 aa12.1□□□□□ -0.47
HLA-DQA1-202ENST00000374949 LRRC15Q8TF66 581 aa12.1□□□□□ -0.47
HLA-DQA1-202ENST00000374949 CCDC47Q96A33 483 aaKnown RBP12.1□□□□□ -0.47
HLA-DQA1-202ENST00000374949 PBXIP1Q96AQ6 731 aa12.1□□□□□ -0.47
HLA-DQA1-202ENST00000374949 CELF4Q9BZC1 486 aaKnown RBP12.1□□□□□ -0.47
HLA-DQA1-202ENST00000374949 DNAJC25Q9H1X3 360 aa12.1□□□□□ -0.47
HLA-DQA1-202ENST00000374949 BLZF1Q9H2G9 400 aa12.1□□□□□ -0.47
HLA-DQA1-202ENST00000374949 BMP2KQ9NSY1 1161 aaPredicted RBP12.1□□□□□ -0.47
HLA-DQA1-202ENST00000374949 RGL1Q9NZL6 768 aa12.1□□□□□ -0.47
HLA-DQA1-202ENST00000374949 GINS2Q9Y248 185 aa12.1□□□□□ -0.47
HLA-DQA1-202ENST00000374949 PCDHA2Q9Y5H9 948 aa12.1□□□□□ -0.47
HLA-DQA1-202ENST00000374949 PER2O15055 1255 aa12.09□□□□□ -0.47
HLA-DQA1-202ENST00000374949 MGEA5O60502 916 aa12.09□□□□□ -0.47
HLA-DQA1-202ENST00000374949 RPLP2P05387 115 aaKnown RBP12.09□□□□□ -0.47
HLA-DQA1-202ENST00000374949 PLA2G4BP0C869 781 aa12.09□□□□□ -0.47
HLA-DQA1-202ENST00000374949 ZNF165P49910 485 aa12.09□□□□□ -0.47
HLA-DQA1-202ENST00000374949 ZXDAP98168 799 aa12.09□□□□□ -0.47
HLA-DQA1-202ENST00000374949 CYP4A11Q02928 519 aa12.09□□□□□ -0.47
HLA-DQA1-202ENST00000374949 NFX1Q12986 1120 aaKnown RBP12.09□□□□□ -0.47
HLA-DQA1-202ENST00000374949 CTTNQ14247 550 aaKnown RBP12.09□□□□□ -0.47
HLA-DQA1-202ENST00000374949 UVSSAQ2YD98 709 aa12.09□□□□□ -0.47
HLA-DQA1-202ENST00000374949 SPOUT1Q5T280 376 aaKnown RBP12.09□□□□□ -0.47
HLA-DQA1-202ENST00000374949 MTHFD1LQ6UB35 978 aa12.09□□□□□ -0.47
HLA-DQA1-202ENST00000374949 KCNK18Q7Z418 384 aa12.09□□□□□ -0.47
HLA-DQA1-202ENST00000374949 SUGP1Q8IWZ8 645 aaKnown RBP12.09□□□□□ -0.47
HLA-DQA1-202ENST00000374949 MLKLQ8NB16 471 aa12.09□□□□□ -0.47
HLA-DQA1-202ENST00000374949 RNF214Q8ND24 703 aa12.09□□□□□ -0.47
HLA-DQA1-202ENST00000374949 FAM200AQ8TCP9 573 aa12.09□□□□□ -0.47
HLA-DQA1-202ENST00000374949 TMEM40Q8WWA1 233 aa12.09□□□□□ -0.47
HLA-DQA1-202ENST00000374949 RPGRIP1Q96KN7 1286 aa12.09□□□□□ -0.47
HLA-DQA1-202ENST00000374949 NACC1Q96RE7 527 aa12.09□□□□□ -0.47
HLA-DQA1-202ENST00000374949 PPP1R16BQ96T49 567 aa12.09□□□□□ -0.47
HLA-DQA1-202ENST00000374949 GTPBP4Q9BZE4 634 aaKnown RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms