RNA–Protein interactions for RNA: ENST00000374481.7

CD28-202, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 4,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-202ENST00000374481 IPO5O00410 1097 aaKnown RBP10.9□□□□□ -0.66
CD28-202ENST00000374481 KRT4P19013 534 aa10.9□□□□□ -0.66
CD28-202ENST00000374481 SERPINB1P30740 379 aa10.9□□□□□ -0.66
CD28-202ENST00000374481 MAP3K7CLP57077 242 aa10.9□□□□□ -0.66
CD28-202ENST00000374481 GJC2Q5T442 439 aaPredicted RBP10.9□□□□□ -0.66
CD28-202ENST00000374481 KAZNQ674X7 775 aa10.9□□□□□ -0.66
CD28-202ENST00000374481 ZBTB8BQ8NAP8 495 aaPredicted RBP10.9□□□□□ -0.66
CD28-202ENST00000374481 HELBQ8NG08 1087 aaPredicted RBP10.9□□□□□ -0.66
CD28-202ENST00000374481 PYROXD1Q8WU10 500 aa10.9□□□□□ -0.66
CD28-202ENST00000374481 LGR6Q9HBX8 967 aa10.9□□□□□ -0.66
CD28-202ENST00000374481 ARHGEF38Q9NXL2 777 aa10.9□□□□□ -0.66
CD28-202ENST00000374481 ZSWIM5Q9P217 1185 aa10.9□□□□□ -0.66
CD28-202ENST00000374481 BLOC1S6Q9UL45 172 aa10.9□□□□□ -0.66
CD28-202ENST00000374481 TET3O43151 1660 aa10.9□□□□□ -0.66
CD28-202ENST00000374481 IQANK1A0A1B0GTG1 560 aa10.9□□□□□ -0.67
CD28-202ENST00000374481 FAM196BA6NMK8 535 aa10.9□□□□□ -0.67
CD28-202ENST00000374481 NBPF26B4DH59 902 aa10.9□□□□□ -0.67
CD28-202ENST00000374481 SMAPO00193 183 aa10.9□□□□□ -0.67
CD28-202ENST00000374481 KIF22Q14807 665 aa10.9□□□□□ -0.67
CD28-202ENST00000374481 THOC7Q6I9Y2 204 aaKnown RBP10.9□□□□□ -0.67
CD28-202ENST00000374481 RNF207Q6ZRF8 634 aa10.9□□□□□ -0.67
CD28-202ENST00000374481 LPCAT2Q7L5N7 544 aa10.9□□□□□ -0.67
CD28-202ENST00000374481 GPBP1Q86WP2 473 aa10.9□□□□□ -0.67
CD28-202ENST00000374481 SFR1Q86XK3 245 aa10.9□□□□□ -0.67
CD28-202ENST00000374481 SCUBE1Q8IWY4 988 aa10.9□□□□□ -0.67
CD28-202ENST00000374481 NBPF15Q8N660 670 aa10.9□□□□□ -0.67
CD28-202ENST00000374481 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.9□□□□□ -0.67
CD28-202ENST00000374481 GIPC3Q8TF64 312 aa10.9□□□□□ -0.67
CD28-202ENST00000374481 ADAM33Q9BZ11 813 aa10.9□□□□□ -0.67
CD28-202ENST00000374481 KLHL4Q9C0H6 718 aa10.9□□□□□ -0.67
CD28-202ENST00000374481 ATAD3AQ9NVI7 634 aa10.9□□□□□ -0.67
CD28-202ENST00000374481 COPEO14579 308 aa10.89□□□□□ -0.67
CD28-202ENST00000374481 KRT38O76015 456 aa10.89□□□□□ -0.67
CD28-202ENST00000374481 BAG3O95817 575 aa10.89□□□□□ -0.67
CD28-202ENST00000374481 KLHDC7AQ5VTJ3 777 aa10.89□□□□□ -0.67
CD28-202ENST00000374481 ANO7Q6IWH7 933 aa10.89□□□□□ -0.67
CD28-202ENST00000374481 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.89□□□□□ -0.67
CD28-202ENST00000374481 RDH13Q8NBN7 331 aa10.89□□□□□ -0.67
CD28-202ENST00000374481 TTC8Q8TAM2 541 aa10.89□□□□□ -0.67
CD28-202ENST00000374481 RBM46Q8TBY0 533 aaKnown RBP10.89□□□□□ -0.67
CD28-202ENST00000374481 RASGRP4Q8TDF6 673 aa10.89□□□□□ -0.67
CD28-202ENST00000374481 MTMR8Q96EF0 704 aa10.89□□□□□ -0.67
CD28-202ENST00000374481 C9orf72Q96LT7 481 aa10.89□□□□□ -0.67
CD28-202ENST00000374481 TTC25Q96NG3 672 aa10.89□□□□□ -0.67
CD28-202ENST00000374481 EDC4Q6P2E9 1401 aaKnown RBP10.89□□□□□ -0.67
CD28-202ENST00000374481 KRT36O76013 467 aa10.89□□□□□ -0.67
CD28-202ENST00000374481 CCNFP41002 786 aa10.89□□□□□ -0.67
CD28-202ENST00000374481 PRAMEP78395 509 aa10.89□□□□□ -0.67
CD28-202ENST00000374481 TRMT5Q32P41 509 aaKnown RBP10.89□□□□□ -0.67
CD28-202ENST00000374481 LRRC6Q86X45 466 aa10.89□□□□□ -0.67
CD28-202ENST00000374481 TRIM59Q8IWR1 403 aa10.89□□□□□ -0.67
CD28-202ENST00000374481 ZNF280CQ8ND82 737 aa10.89□□□□□ -0.67
CD28-202ENST00000374481 CALML6Q8TD86 181 aa10.89□□□□□ -0.67
CD28-202ENST00000374481 MAK16Q9BXY0 300 aaKnown RBP10.89□□□□□ -0.67
CD28-202ENST00000374481 FHDC1Q9C0D6 1143 aaPredicted RBP10.89□□□□□ -0.67
CD28-202ENST00000374481 RAB20Q9NX57 234 aa10.89□□□□□ -0.67
CD28-202ENST00000374481 GCNT4Q9P109 453 aa10.89□□□□□ -0.67
CD28-202ENST00000374481 SEPT3Q9UH03 358 aa10.89□□□□□ -0.67
CD28-202ENST00000374481 NCKAP5LQ9HCH0 1330 aa10.89□□□□□ -0.67
CD28-202ENST00000374481 POTEFA5A3E0 1075 aa10.89□□□□□ -0.67
CD28-202ENST00000374481 LRRN2O75325 713 aa10.89□□□□□ -0.67
CD28-202ENST00000374481 FKBP6O75344 327 aa10.89□□□□□ -0.67
CD28-202ENST00000374481 TTC4O95801 387 aa10.89□□□□□ -0.67
CD28-202ENST00000374481 HMOX2P30519 316 aa10.89□□□□□ -0.67
CD28-202ENST00000374481 ALDH18A1P54886 795 aaKnown RBP10.89□□□□□ -0.67
CD28-202ENST00000374481 TNIP1Q15025 636 aa10.89□□□□□ -0.67
CD28-202ENST00000374481 RSBN1LQ6PCB5 846 aaPredicted RBP10.89□□□□□ -0.67
CD28-202ENST00000374481 C1orf131Q8NDD1 294 aaKnown RBP10.89□□□□□ -0.67
CD28-202ENST00000374481 LPIN2Q92539 896 aa10.89□□□□□ -0.67
CD28-202ENST00000374481 GPKOWQ92917 476 aaPredicted RBP eCLIP10.89□□□□□ -0.67
CD28-202ENST00000374481 DGCR14Q96DF8 476 aaKnown RBP10.89□□□□□ -0.67
CD28-202ENST00000374481 ZFRQ96KR1 1074 aaKnown RBP10.89□□□□□ -0.67
CD28-202ENST00000374481 ERGIC2Q96RQ1 377 aa10.89□□□□□ -0.67
CD28-202ENST00000374481 SH3GL1Q99961 368 aa10.89□□□□□ -0.67
CD28-202ENST00000374481 BTBD10Q9BSF8 475 aa10.89□□□□□ -0.67
CD28-202ENST00000374481 SAP30BPQ9UHR5 308 aaKnown RBP10.89□□□□□ -0.67
CD28-202ENST00000374481 SFI1A8K8P3 1242 aa10.88□□□□□ -0.67
CD28-202ENST00000374481 LAD1O00515 517 aa10.88□□□□□ -0.67
CD28-202ENST00000374481 SKIV2L2P42285 1042 aaKnown RBP10.88□□□□□ -0.67
CD28-202ENST00000374481 CDK17Q00537 523 aa10.88□□□□□ -0.67
CD28-202ENST00000374481 OVGP1Q12889 678 aa10.88□□□□□ -0.67
CD28-202ENST00000374481 OASLQ15646 514 aaKnown RBP10.88□□□□□ -0.67
CD28-202ENST00000374481 PARP6Q2NL67 630 aa10.88□□□□□ -0.67
CD28-202ENST00000374481 HP1BP3Q5SSJ5 553 aaPredicted RBP10.88□□□□□ -0.67
CD28-202ENST00000374481 PLEKHA7Q6IQ23 1121 aa10.88□□□□□ -0.67
CD28-202ENST00000374481 EIF1ADQ8N9N8 165 aaKnown RBP10.88□□□□□ -0.67
CD28-202ENST00000374481 KCNH5Q8NCM2 988 aa10.88□□□□□ -0.67
CD28-202ENST00000374481 SNF8Q96H20 258 aa10.88□□□□□ -0.67
CD28-202ENST00000374481 CCDC28BQ9BUN5 200 aa10.88□□□□□ -0.67
CD28-202ENST00000374481 PUS7LQ9H0K6 701 aaKnown RBP10.88□□□□□ -0.67
CD28-202ENST00000374481 SEMA4AQ9H3S1 761 aa10.88□□□□□ -0.67
CD28-202ENST00000374481 MRGBPQ9NV56 204 aa10.88□□□□□ -0.67
CD28-202ENST00000374481 CARD8Q9Y2G2 431 aa10.88□□□□□ -0.67
CD28-202ENST00000374481 A8MXQ7 604 aa10.88□□□□□ -0.67
CD28-202ENST00000374481 PHF2O75151 1096 aa10.88□□□□□ -0.67
CD28-202ENST00000374481 POTEIP0CG38 1075 aa10.88□□□□□ -0.67
CD28-202ENST00000374481 BBS9Q3SYG4 887 aa10.88□□□□□ -0.67
CD28-202ENST00000374481 FAM13CQ8NE31 585 aa10.88□□□□□ -0.67
CD28-202ENST00000374481 EME1Q96AY2 570 aa10.88□□□□□ -0.67
CD28-202ENST00000374481 GRIP2Q9C0E4 1043 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms