RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 ERCC6LQ2NKX8 1250 aa13.69□□□□□ -0.22
PRPF4-202ENST00000374199 DCAF17Q5H9S7 520 aaPredicted RBP13.69□□□□□ -0.22
PRPF4-202ENST00000374199 SLFN11Q7Z7L1 901 aa13.69□□□□□ -0.22
PRPF4-202ENST00000374199 PARD3BQ8TEW8 1205 aa13.69□□□□□ -0.22
PRPF4-202ENST00000374199 KMT5AQ9NQR1 393 aa13.69□□□□□ -0.22
PRPF4-202ENST00000374199 RALGAPA2Q2PPJ7 1873 aa13.69□□□□□ -0.22
PRPF4-202ENST00000374199 ABLIM1O14639 778 aa13.68□□□□□ -0.22
PRPF4-202ENST00000374199 SLC26A2P50443 739 aa13.68□□□□□ -0.22
PRPF4-202ENST00000374199 HADHBP55084 474 aaKnown RBP13.68□□□□□ -0.22
PRPF4-202ENST00000374199 FBXO38Q6PIJ6 1188 aa13.68□□□□□ -0.22
PRPF4-202ENST00000374199 LRRC57Q8N9N7 239 aa13.68□□□□□ -0.22
PRPF4-202ENST00000374199 HAPLN2Q9GZV7 340 aa13.68□□□□□ -0.22
PRPF4-202ENST00000374199 TMEM117Q9H0C3 514 aa13.68□□□□□ -0.22
PRPF4-202ENST00000374199 ZNF446Q9NWS9 450 aa13.68□□□□□ -0.22
PRPF4-202ENST00000374199 NAGPAQ9UK23 515 aa13.68□□□□□ -0.22
PRPF4-202ENST00000374199 GUCA1BQ9UMX6 200 aa13.68□□□□□ -0.22
PRPF4-202ENST00000374199 DENND3A2RUS2 1198 aa13.68□□□□□ -0.22
PRPF4-202ENST00000374199 CYP2J2P51589 502 aa13.68□□□□□ -0.22
PRPF4-202ENST00000374199 CYP24A1Q07973 514 aa13.68□□□□□ -0.22
PRPF4-202ENST00000374199 SNRNP35Q16560 246 aaKnown RBP13.68□□□□□ -0.22
PRPF4-202ENST00000374199 GLIPR1L2Q4G1C9 344 aa13.68□□□□□ -0.22
PRPF4-202ENST00000374199 ASAP3Q8TDY4 903 aa13.68□□□□□ -0.22
PRPF4-202ENST00000374199 POLR3FQ9H1D9 316 aaPredicted RBP13.68□□□□□ -0.22
PRPF4-202ENST00000374199 ANKZF1Q9H8Y5 726 aa13.68□□□□□ -0.22
PRPF4-202ENST00000374199 PNMA3Q9UL41 463 aa13.68□□□□□ -0.22
PRPF4-202ENST00000374199 SNX12Q9UMY4 172 aa13.68□□□□□ -0.22
PRPF4-202ENST00000374199 EXOC3O60645 756 aa13.68□□□□□ -0.22
PRPF4-202ENST00000374199 GRM1Q13255 1194 aa13.68□□□□□ -0.22
PRPF4-202ENST00000374199 MKRN4PQ13434 485 aaPredicted RBP13.68□□□□□ -0.22
PRPF4-202ENST00000374199 TAPT1Q6NXT6 567 aa13.68□□□□□ -0.22
PRPF4-202ENST00000374199 BBXQ8WY36 941 aaPredicted RBP13.68□□□□□ -0.22
PRPF4-202ENST00000374199 SEPT1Q8WYJ6 367 aa13.68□□□□□ -0.22
PRPF4-202ENST00000374199 FAM167AQ96KS9 214 aa13.68□□□□□ -0.22
PRPF4-202ENST00000374199 NFKBIZQ9BYH8 718 aa13.68□□□□□ -0.22
PRPF4-202ENST00000374199 LRRIQ3A6PVS8 624 aaPredicted RBP13.67□□□□□ -0.22
PRPF4-202ENST00000374199 DDX3XO00571 662 aaKnown RBP eCLIP13.67□□□□□ -0.223e-8■■■■■ 39.4
PRPF4-202ENST00000374199 TRIM49P0CI25 452 aa13.67□□□□□ -0.22
PRPF4-202ENST00000374199 TRIM49CP0CI26 452 aa13.67□□□□□ -0.22
PRPF4-202ENST00000374199 KLHL30Q0D2K2 578 aa13.67□□□□□ -0.22
PRPF4-202ENST00000374199 CRELD2Q6UXH1 353 aaPredicted RBP13.67□□□□□ -0.22
PRPF4-202ENST00000374199 KIAA1328Q86T90 577 aa13.67□□□□□ -0.22
PRPF4-202ENST00000374199 NCAPG2Q86XI2 1143 aa13.67□□□□□ -0.22
PRPF4-202ENST00000374199 CREG2Q8IUH2 290 aa13.67□□□□□ -0.22
PRPF4-202ENST00000374199 LNX1Q8TBB1 728 aaPredicted RBP13.67□□□□□ -0.22
PRPF4-202ENST00000374199 HNRNPLLQ8WVV9 542 aaKnown RBP13.67□□□□□ -0.22
PRPF4-202ENST00000374199 RPGRIP1Q96KN7 1286 aa13.67□□□□□ -0.22
PRPF4-202ENST00000374199 MMP19Q99542 508 aa13.67□□□□□ -0.22
PRPF4-202ENST00000374199 TMEM8AQ9HCN3 771 aa13.67□□□□□ -0.22
PRPF4-202ENST00000374199 SEPT9Q9UHD8 586 aaPredicted RBP13.67□□□□□ -0.22
PRPF4-202ENST00000374199 ZC3H11AO75152 810 aaKnown RBP eCLIP13.67□□□□□ -0.22
PRPF4-202ENST00000374199 PROZP22891 400 aa13.67□□□□□ -0.22
PRPF4-202ENST00000374199 STAT1P42224 750 aa13.67□□□□□ -0.22
PRPF4-202ENST00000374199 MAGEA1P43355 309 aa13.67□□□□□ -0.22
PRPF4-202ENST00000374199 MSL3Q8N5Y2 521 aaKnown RBP13.67□□□□□ -0.22
PRPF4-202ENST00000374199 PSPC1Q8WXF1 523 aaKnown RBP13.67□□□□□ -0.22
PRPF4-202ENST00000374199 MPHOSPH6Q99547 160 aaKnown RBP13.67□□□□□ -0.22
PRPF4-202ENST00000374199 SH2D3AQ9BRG2 576 aa13.67□□□□□ -0.22
PRPF4-202ENST00000374199 KIAA1586Q9HCI6 787 aa13.67□□□□□ -0.22
PRPF4-202ENST00000374199 EDN1P05305 212 aa13.66□□□□□ -0.22
PRPF4-202ENST00000374199 CETPP11597 493 aa13.66□□□□□ -0.22
PRPF4-202ENST00000374199 GTF2A2P52657 109 aa13.66□□□□□ -0.22
PRPF4-202ENST00000374199 PSMD6Q15008 389 aa13.66□□□□□ -0.22
PRPF4-202ENST00000374199 FAM160B1Q5W0V3 765 aa13.66□□□□□ -0.22
PRPF4-202ENST00000374199 FAM71AQ8IYT1 594 aa13.66□□□□□ -0.22
PRPF4-202ENST00000374199 SYCP3Q8IZU3 236 aa13.66□□□□□ -0.22
PRPF4-202ENST00000374199 GOLGA1Q92805 767 aa13.66□□□□□ -0.22
PRPF4-202ENST00000374199 TLR10Q9BXR5 811 aa13.66□□□□□ -0.22
PRPF4-202ENST00000374199 MYH10P35580 1976 aa13.66□□□□□ -0.22
PRPF4-202ENST00000374199 AKR1B10O60218 316 aa13.66□□□□□ -0.22
PRPF4-202ENST00000374199 IPO7O95373 1038 aaKnown RBP13.66□□□□□ -0.22
PRPF4-202ENST00000374199 SOX10P56693 466 aa13.66□□□□□ -0.22
PRPF4-202ENST00000374199 POU5F1BQ06416 359 aa13.66□□□□□ -0.22
PRPF4-202ENST00000374199 RAPGEF1Q13905 1077 aa13.66□□□□□ -0.22
PRPF4-202ENST00000374199 GJB7Q6PEY0 223 aa13.66□□□□□ -0.22
PRPF4-202ENST00000374199 EXOC8Q8IYI6 725 aa13.66□□□□□ -0.22
PRPF4-202ENST00000374199 HELQQ8TDG4 1101 aa13.66□□□□□ -0.22
PRPF4-202ENST00000374199 RUBCNQ92622 972 aa13.66□□□□□ -0.22
PRPF4-202ENST00000374199 KIFC3Q9BVG8 833 aa13.66□□□□□ -0.22
PRPF4-202ENST00000374199 DNAJC12Q9UKB3 198 aa13.66□□□□□ -0.22
PRPF4-202ENST00000374199 STXBP5LQ9Y2K9 1186 aa13.66□□□□□ -0.22
PRPF4-202ENST00000374199 SAR1BQ9Y6B6 198 aa13.66□□□□□ -0.22
PRPF4-202ENST00000374199 EXTL3O43909 919 aa13.66□□□□□ -0.22
PRPF4-202ENST00000374199 EVI5O60447 810 aa13.66□□□□□ -0.22
PRPF4-202ENST00000374199 CHMP4BP1P59074 171 aa13.66□□□□□ -0.22
PRPF4-202ENST00000374199 GRB14Q14449 540 aa13.66□□□□□ -0.22
PRPF4-202ENST00000374199 MEI1Q5TIA1 1274 aa13.66□□□□□ -0.22
PRPF4-202ENST00000374199 IFNLR1Q8IU57 520 aaPredicted RBP13.66□□□□□ -0.22
PRPF4-202ENST00000374199 CBWD2Q8IUF1 395 aa13.66□□□□□ -0.22
PRPF4-202ENST00000374199 CALR3Q96L12 384 aaKnown RBP13.66□□□□□ -0.22
PRPF4-202ENST00000374199 MLXIPQ9HAP2 919 aa13.66□□□□□ -0.22
PRPF4-202ENST00000374199 ZCCHC17Q9NP64 241 aaKnown RBP13.66□□□□□ -0.22
PRPF4-202ENST00000374199 A0A0B4J269 797 aa13.65□□□□□ -0.22
PRPF4-202ENST00000374199 ASB14A6NK59 587 aa13.65□□□□□ -0.22
PRPF4-202ENST00000374199 TCF7P36402 384 aaPredicted RBP13.65□□□□□ -0.22
PRPF4-202ENST00000374199 GCLCP48506 637 aaPredicted RBP13.65□□□□□ -0.22
PRPF4-202ENST00000374199 WDR93Q6P2C0 686 aa13.65□□□□□ -0.22
PRPF4-202ENST00000374199 SEPT14Q6ZU15 432 aa13.65□□□□□ -0.22
PRPF4-202ENST00000374199 GPD1LQ8N335 351 aa13.65□□□□□ -0.22
PRPF4-202ENST00000374199 PDCL2Q8N4E4 241 aa13.65□□□□□ -0.22
PRPF4-202ENST00000374199 ATP8B4Q8TF62 1192 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms