RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 TAC1P20366 129 aa13.87□□□□□ -0.19
PRPF4-201ENST00000374198 MARK3P27448 753 aa13.87□□□□□ -0.19
PRPF4-201ENST00000374198 POLD1P28340 1107 aa13.87□□□□□ -0.19
PRPF4-201ENST00000374198 IGHMBP2P38935 993 aaKnown RBP13.87□□□□□ -0.19
PRPF4-201ENST00000374198 CRKLP46109 303 aaKnown RBP13.87□□□□□ -0.19
PRPF4-201ENST00000374198 INF2Q27J81 1249 aa13.87□□□□□ -0.19
PRPF4-201ENST00000374198 SV2BQ7L1I2 683 aa13.87□□□□□ -0.19
PRPF4-201ENST00000374198 AMIGO3Q86WK7 504 aa13.87□□□□□ -0.19
PRPF4-201ENST00000374198 TLE6Q9H808 572 aa13.87□□□□□ -0.19
PRPF4-201ENST00000374198 QSER1Q2KHR3 1735 aa13.87□□□□□ -0.19
PRPF4-201ENST00000374198 MYMKA6NI61 221 aa13.86□□□□□ -0.19
PRPF4-201ENST00000374198 DDX3YO15523 660 aaKnown RBP13.86□□□□□ -0.19
PRPF4-201ENST00000374198 H2AFZP0C0S5 128 aa13.86□□□□□ -0.19
PRPF4-201ENST00000374198 DESP17661 470 aa13.86□□□□□ -0.19
PRPF4-201ENST00000374198 PTGIRP43119 386 aa13.86□□□□□ -0.19
PRPF4-201ENST00000374198 FKBP3Q00688 224 aaKnown RBP13.86□□□□□ -0.19
PRPF4-201ENST00000374198 RCN1Q15293 331 aa13.86□□□□□ -0.19
PRPF4-201ENST00000374198 GSTA3Q16772 222 aa13.86□□□□□ -0.19
PRPF4-201ENST00000374198 ZNF449Q6P9G9 518 aa13.86□□□□□ -0.19
PRPF4-201ENST00000374198 FOXR2Q6PJQ5 311 aa13.86□□□□□ -0.19
PRPF4-201ENST00000374198 C4orf50Q6ZRC1 276 aa13.86□□□□□ -0.19
PRPF4-201ENST00000374198 ZNF365Q70YC5 407 aa13.86□□□□□ -0.19
PRPF4-201ENST00000374198 H2AFVQ71UI9 128 aa13.86□□□□□ -0.19
PRPF4-201ENST00000374198 CNNM1Q9NRU3 951 aa13.86□□□□□ -0.19
PRPF4-201ENST00000374198 ARMCX3Q9UH62 379 aaPredicted RBP13.86□□□□□ -0.19
PRPF4-201ENST00000374198 USH1CQ9Y6N9 552 aa13.86□□□□□ -0.19
PRPF4-201ENST00000374198 COMMD3-BMI1R4GMX3 469 aa13.86□□□□□ -0.19
PRPF4-201ENST00000374198 PFASO15067 1338 aa13.86□□□□□ -0.19
PRPF4-201ENST00000374198 CNTNAP4Q9C0A0 1308 aa13.86□□□□□ -0.19
PRPF4-201ENST00000374198 SRCAPQ6ZRS2 3230 aa13.86□□□□□ -0.19
PRPF4-201ENST00000374198 M0R2N6 131 aa13.86□□□□□ -0.19
PRPF4-201ENST00000374198 BRAFP15056 766 aa13.86□□□□□ -0.19
PRPF4-201ENST00000374198 PTGER2P43116 358 aa13.86□□□□□ -0.19
PRPF4-201ENST00000374198 MAGEA10P43363 369 aaPredicted RBP13.86□□□□□ -0.19
PRPF4-201ENST00000374198 INHBCP55103 352 aa13.86□□□□□ -0.19
PRPF4-201ENST00000374198 TRAPPC3LQ5T215 181 aa13.86□□□□□ -0.19
PRPF4-201ENST00000374198 RC3H1Q5TC82 1133 aaKnown RBP13.86□□□□□ -0.19
PRPF4-201ENST00000374198 LRRC74BQ6ZQY2 392 aa13.86□□□□□ -0.19
PRPF4-201ENST00000374198 MIGA1Q8NAN2 632 aa13.86□□□□□ -0.19
PRPF4-201ENST00000374198 DHX36Q9H2U1 1008 aaKnown RBP13.86□□□□□ -0.19
PRPF4-201ENST00000374198 PICK1Q9NRD5 415 aa13.86□□□□□ -0.19
PRPF4-201ENST00000374198 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.86□□□□□ -0.19
PRPF4-201ENST00000374198 LARSQ9P2J5 1176 aaKnown RBP13.86□□□□□ -0.19
PRPF4-201ENST00000374198 ATP8B3O60423 1300 aa13.86□□□□□ -0.19
PRPF4-201ENST00000374198 TRAF5O00463 557 aa13.85□□□□□ -0.19
PRPF4-201ENST00000374198 PDE8BO95263 885 aa13.85□□□□□ -0.19
PRPF4-201ENST00000374198 GNA14O95837 355 aa13.85□□□□□ -0.19
PRPF4-201ENST00000374198 USP46P62068 366 aa13.85□□□□□ -0.19
PRPF4-201ENST00000374198 LRRC41Q15345 812 aa13.85□□□□□ -0.19
PRPF4-201ENST00000374198 ARHGEF18Q6ZSZ5 1173 aa13.85□□□□□ -0.19
PRPF4-201ENST00000374198 FAM47EQ6ZV65 393 aa13.85□□□□□ -0.19
PRPF4-201ENST00000374198 DYMQ7RTS9 669 aa13.85□□□□□ -0.19
PRPF4-201ENST00000374198 NR1H4Q96RI1 486 aaPredicted RBP13.85□□□□□ -0.19
PRPF4-201ENST00000374198 IWS1Q96ST2 819 aa13.85□□□□□ -0.19
PRPF4-201ENST00000374198 ISCA1Q9BUE6 129 aa13.85□□□□□ -0.19
PRPF4-201ENST00000374198 KANSL2Q9H9L4 492 aa13.85□□□□□ -0.19
PRPF4-201ENST00000374198 INTUQ9ULD6 942 aa13.85□□□□□ -0.19
PRPF4-201ENST00000374198 NENFQ9UMX5 172 aa13.85□□□□□ -0.19
PRPF4-201ENST00000374198 PCDHA6Q9UN73 950 aa13.85□□□□□ -0.19
PRPF4-201ENST00000374198 STARD13Q9Y3M8 1113 aa13.85□□□□□ -0.19
PRPF4-201ENST00000374198 PCDHA8Q9Y5H6 950 aa13.85□□□□□ -0.19
PRPF4-201ENST00000374198 KCPQ6ZWJ8 1503 aa13.85□□□□□ -0.19
PRPF4-201ENST00000374198 FOXO6A8MYZ6 492 aa13.85□□□□□ -0.19
PRPF4-201ENST00000374198 DCTN3O75935 186 aa13.85□□□□□ -0.19
PRPF4-201ENST00000374198 KRT13P13646 458 aa13.85□□□□□ -0.19
PRPF4-201ENST00000374198 PTPN4P29074 926 aa13.85□□□□□ -0.19
PRPF4-201ENST00000374198 FOXN2P32314 431 aa13.85□□□□□ -0.19
PRPF4-201ENST00000374198 SLC34A1Q06495 639 aa13.85□□□□□ -0.19
PRPF4-201ENST00000374198 STRN3Q13033 797 aa13.85□□□□□ -0.19
PRPF4-201ENST00000374198 TRIM59Q8IWR1 403 aa13.85□□□□□ -0.19
PRPF4-201ENST00000374198 PPFIBP2Q8ND30 876 aa13.85□□□□□ -0.19
PRPF4-201ENST00000374198 GLIS3Q8NEA6 775 aa13.85□□□□□ -0.19
PRPF4-201ENST00000374198 GPKOWQ92917 476 aaPredicted RBP eCLIP13.85□□□□□ -0.19
PRPF4-201ENST00000374198 C18orf8Q96DM3 657 aa13.85□□□□□ -0.19
PRPF4-201ENST00000374198 FAM89AQ96GI7 184 aa13.85□□□□□ -0.19
PRPF4-201ENST00000374198 CCDC28BQ9BUN5 200 aa13.85□□□□□ -0.19
PRPF4-201ENST00000374198 PLA2G12BQ9BX93 195 aa13.85□□□□□ -0.19
PRPF4-201ENST00000374198 NT5C3AQ9H0P0 336 aa13.85□□□□□ -0.19
PRPF4-201ENST00000374198 ZNF831Q5JPB2 1677 aa13.85□□□□□ -0.19
PRPF4-201ENST00000374198 PODXLO00592 558 aa13.84□□□□□ -0.19
PRPF4-201ENST00000374198 RPS6KA4O75676 772 aa13.84□□□□□ -0.19
PRPF4-201ENST00000374198 CBX6O95503 412 aa13.84□□□□□ -0.19
PRPF4-201ENST00000374198 LYNP07948 512 aa13.84□□□□□ -0.19
PRPF4-201ENST00000374198 UBTFL6P0CB48 400 aaPredicted RBP13.84□□□□□ -0.19
PRPF4-201ENST00000374198 BPIFB4P59827 614 aa13.84□□□□□ -0.19
PRPF4-201ENST00000374198 AP1B1Q10567 949 aa13.84□□□□□ -0.19
PRPF4-201ENST00000374198 ZCWPW2Q504Y3 356 aa13.84□□□□□ -0.19
PRPF4-201ENST00000374198 RFWD3Q6PCD5 774 aa13.84□□□□□ -0.19
PRPF4-201ENST00000374198 STKLD1Q8NE28 680 aa13.84□□□□□ -0.19
PRPF4-201ENST00000374198 CALML4Q96GE6 196 aa13.84□□□□□ -0.19
PRPF4-201ENST00000374198 DDX50Q9BQ39 737 aaKnown RBP13.84□□□□□ -0.19
PRPF4-201ENST00000374198 SH3GLB2Q9NR46 395 aa13.84□□□□□ -0.19
PRPF4-201ENST00000374198 PPP1R9AQ9ULJ8 1098 aa13.84□□□□□ -0.19
PRPF4-201ENST00000374198 PCDHA3Q9Y5H8 950 aa13.84□□□□□ -0.19
PRPF4-201ENST00000374198 UBR3Q6ZT12 1888 aa13.84□□□□□ -0.19
PRPF4-201ENST00000374198 PALM3A6NDB9 673 aaPredicted RBP13.84□□□□□ -0.19
PRPF4-201ENST00000374198 OR52Z1P0C646 297 aa13.84□□□□□ -0.19
PRPF4-201ENST00000374198 ZNF568Q3ZCX4 644 aa13.84□□□□□ -0.19
PRPF4-201ENST00000374198 LIN52Q52LA3 116 aa13.84□□□□□ -0.19
PRPF4-201ENST00000374198 CEP128Q6ZU80 1094 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms