RNA–Protein interactions for RNA: ENST00000373888.8

SMPDL3B-201, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMPDL3B, Length 1,548 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-201ENST00000373888 ADCY5O95622 1261 aa16.06■□□□□ 0.16
SMPDL3B-201ENST00000373888 CD4P01730 458 aa16.06■□□□□ 0.16
SMPDL3B-201ENST00000373888 CRYBB1P53674 252 aaPredicted RBP16.06■□□□□ 0.16
SMPDL3B-201ENST00000373888 STRN3Q13033 797 aa16.06■□□□□ 0.16
SMPDL3B-201ENST00000373888 NCAPHQ15003 741 aa16.06■□□□□ 0.16
SMPDL3B-201ENST00000373888 MAPK6Q16659 721 aa16.06■□□□□ 0.16
SMPDL3B-201ENST00000373888 FAM187BQ17R55 369 aa16.06■□□□□ 0.16
SMPDL3B-201ENST00000373888 EDRF1Q3B7T1 1238 aa16.06■□□□□ 0.16
SMPDL3B-201ENST00000373888 ANKRD40Q6AI12 368 aa16.06■□□□□ 0.16
SMPDL3B-201ENST00000373888 SYCP3Q8IZU3 236 aa16.06■□□□□ 0.16
SMPDL3B-201ENST00000373888 AOPEPQ8N6M6 819 aa16.06■□□□□ 0.16
SMPDL3B-201ENST00000373888 PAWRQ96IZ0 340 aaKnown RBP16.06■□□□□ 0.16
SMPDL3B-201ENST00000373888 TOX2Q96NM4 488 aa16.06■□□□□ 0.16
SMPDL3B-201ENST00000373888 GCOM2Q9BZD3 368 aaPredicted RBP16.06■□□□□ 0.16
SMPDL3B-201ENST00000373888 MINDY3Q9H8M7 445 aa16.06■□□□□ 0.16
SMPDL3B-201ENST00000373888 KIAA0100Q14667 2235 aaKnown RBP16.05■□□□□ 0.16
SMPDL3B-201ENST00000373888 SMTNL1A8MU46 457 aa16.05■□□□□ 0.16
SMPDL3B-201ENST00000373888 BECN2A8MW95 431 aa16.05■□□□□ 0.16
SMPDL3B-201ENST00000373888 INO80B-WBP1J3KQ70 363 aa16.05■□□□□ 0.16
SMPDL3B-201ENST00000373888 M0QZ92 97 aa16.05■□□□□ 0.16
SMPDL3B-201ENST00000373888 PIGRP01833 764 aa16.05■□□□□ 0.16
SMPDL3B-201ENST00000373888 PRKCBP05771 671 aa16.05■□□□□ 0.16
SMPDL3B-201ENST00000373888 IQCF3P0C7M6 154 aa16.05■□□□□ 0.16
SMPDL3B-201ENST00000373888 DARSP14868 501 aaKnown RBP16.05■□□□□ 0.16
SMPDL3B-201ENST00000373888 EIF4BP23588 611 aaKnown RBP16.05■□□□□ 0.16
SMPDL3B-201ENST00000373888 ATN1P54259 1190 aaPredicted RBP16.05■□□□□ 0.16
SMPDL3B-201ENST00000373888 SNRPFP62306 86 aaKnown RBP16.05■□□□□ 0.16
SMPDL3B-201ENST00000373888 RBL2Q08999 1139 aa16.05■□□□□ 0.16
SMPDL3B-201ENST00000373888 MGAT3Q09327 533 aa16.05■□□□□ 0.16
SMPDL3B-201ENST00000373888 PCBP1Q15365 356 aaKnown RBP eCLIP16.05■□□□□ 0.16
SMPDL3B-201ENST00000373888 SPATA1Q5VX52 437 aa16.05■□□□□ 0.16
SMPDL3B-201ENST00000373888 LUZP1Q86V48 1076 aa16.05■□□□□ 0.16
SMPDL3B-201ENST00000373888 GOLGA5Q8TBA6 731 aa16.05■□□□□ 0.16
SMPDL3B-201ENST00000373888 TMEM174Q8WUU8 243 aa16.05■□□□□ 0.16
SMPDL3B-201ENST00000373888 PRIMPOLQ96LW4 560 aa16.05■□□□□ 0.16
SMPDL3B-201ENST00000373888 OSMRQ99650 979 aa16.05■□□□□ 0.16
SMPDL3B-201ENST00000373888 TSG101Q99816 390 aa16.05■□□□□ 0.16
SMPDL3B-201ENST00000373888 DUSP9Q99956 384 aaKnown RBP16.05■□□□□ 0.16
SMPDL3B-201ENST00000373888 CELF4Q9BZC1 486 aaKnown RBP16.05■□□□□ 0.16
SMPDL3B-201ENST00000373888 INO80BQ9C086 356 aaPredicted RBP16.05■□□□□ 0.16
SMPDL3B-201ENST00000373888 CDHR5Q9HBB8 845 aa16.05■□□□□ 0.16
SMPDL3B-201ENST00000373888 PRMT7Q9NVM4 692 aaPredicted RBP16.05■□□□□ 0.16
SMPDL3B-201ENST00000373888 CGNQ9P2M7 1197 aaKnown RBP16.05■□□□□ 0.16
SMPDL3B-201ENST00000373888 TRPV2Q9Y5S1 764 aa16.05■□□□□ 0.16
SMPDL3B-201ENST00000373888 GOLGA6L6A8MZA4 724 aa16.04■□□□□ 0.16
SMPDL3B-201ENST00000373888 ESPNB1AK53 854 aa16.04■□□□□ 0.16
SMPDL3B-201ENST00000373888 ACKR2O00590 384 aa16.04■□□□□ 0.16
SMPDL3B-201ENST00000373888 CALUO43852 315 aaPredicted RBP16.04■□□□□ 0.16
SMPDL3B-201ENST00000373888 EDN1P05305 212 aa16.04■□□□□ 0.16
SMPDL3B-201ENST00000373888 PTMAP06454 111 aaKnown RBP16.04■□□□□ 0.16
SMPDL3B-201ENST00000373888 TPM3P06753 285 aa16.04■□□□□ 0.16
SMPDL3B-201ENST00000373888 THPOP40225 353 aa16.04■□□□□ 0.16
SMPDL3B-201ENST00000373888 NFIL3Q16649 462 aa16.04■□□□□ 0.16
SMPDL3B-201ENST00000373888 FAM26DQ5JW98 314 aa16.04■□□□□ 0.16
SMPDL3B-201ENST00000373888 HS2ST1Q7LGA3 356 aa16.04■□□□□ 0.16
SMPDL3B-201ENST00000373888 NECAB2Q7Z6G3 386 aa16.04■□□□□ 0.16
SMPDL3B-201ENST00000373888 ZSCAN30Q86W11 494 aa16.04■□□□□ 0.16
SMPDL3B-201ENST00000373888 ZC3H3Q8IXZ2 948 aaKnown RBP16.04■□□□□ 0.16
SMPDL3B-201ENST00000373888 CAGE1Q8TC20 777 aa16.04■□□□□ 0.16
SMPDL3B-201ENST00000373888 MRPL4Q9BYD3 311 aaKnown RBP16.04■□□□□ 0.16
SMPDL3B-201ENST00000373888 IKZF4Q9H2S9 585 aa16.04■□□□□ 0.16
SMPDL3B-201ENST00000373888 AGPAT3Q9NRZ7 376 aa16.04■□□□□ 0.16
SMPDL3B-201ENST00000373888 GINS2Q9Y248 185 aa16.04■□□□□ 0.16
SMPDL3B-201ENST00000373888 NFE2L3Q9Y4A8 694 aa16.04■□□□□ 0.16
SMPDL3B-201ENST00000373888 CDY2AQ9Y6F7 541 aa16.04■□□□□ 0.16
SMPDL3B-201ENST00000373888 DNAH12Q6ZR08 3092 aa16.04■□□□□ 0.16
SMPDL3B-201ENST00000373888 HNRNPDLO14979 420 aaKnown RBP16.04■□□□□ 0.16
SMPDL3B-201ENST00000373888 TLR3O15455 904 aaKnown RBP16.04■□□□□ 0.16
SMPDL3B-201ENST00000373888 PQBP1O60828 265 aaKnown RBP16.04■□□□□ 0.16
SMPDL3B-201ENST00000373888 CHRNA1P02708 482 aa16.04■□□□□ 0.16
SMPDL3B-201ENST00000373888 TPM4P67936 248 aa16.04■□□□□ 0.16
SMPDL3B-201ENST00000373888 AMHR2Q16671 573 aa16.04■□□□□ 0.16
SMPDL3B-201ENST00000373888 SLC39A4Q6P5W5 647 aa16.04■□□□□ 0.16
SMPDL3B-201ENST00000373888 SARM1Q6SZW1 724 aa16.04■□□□□ 0.16
SMPDL3B-201ENST00000373888 ZPBP2Q6X784 338 aa16.04■□□□□ 0.16
SMPDL3B-201ENST00000373888 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.04■□□□□ 0.16
SMPDL3B-201ENST00000373888 UBE2Q1Q7Z7E8 422 aa16.04■□□□□ 0.16
SMPDL3B-201ENST00000373888 TMEM40Q8WWA1 233 aa16.04■□□□□ 0.16
SMPDL3B-201ENST00000373888 BICD1Q96G01 975 aa16.04■□□□□ 0.16
SMPDL3B-201ENST00000373888 CSDE1O75534 798 aaKnown RBP16.03■□□□□ 0.16
SMPDL3B-201ENST00000373888 CTSHP09668 335 aa16.03■□□□□ 0.16
SMPDL3B-201ENST00000373888 CKBP12277 381 aa16.03■□□□□ 0.16
SMPDL3B-201ENST00000373888 LIG4P49917 911 aa16.03■□□□□ 0.16
SMPDL3B-201ENST00000373888 FKBP3Q00688 224 aaKnown RBP16.03■□□□□ 0.16
SMPDL3B-201ENST00000373888 MYBPC2Q14324 1141 aa16.03■□□□□ 0.16
SMPDL3B-201ENST00000373888 TRIM60Q495X7 471 aa16.03■□□□□ 0.16
SMPDL3B-201ENST00000373888 LRRC55Q6ZSA7 311 aa16.03■□□□□ 0.16
SMPDL3B-201ENST00000373888 SLC9A9Q8IVB4 645 aa16.03■□□□□ 0.16
SMPDL3B-201ENST00000373888 C12orf56Q8IXR9 622 aa16.03■□□□□ 0.16
SMPDL3B-201ENST00000373888 CSGALNACT2Q8N6G5 542 aa16.03■□□□□ 0.16
SMPDL3B-201ENST00000373888 CCDC155Q8N6L0 562 aa16.03■□□□□ 0.16
SMPDL3B-201ENST00000373888 TARS2Q9BW92 718 aaKnown RBP16.03■□□□□ 0.16
SMPDL3B-201ENST00000373888 HSD3B7Q9H2F3 369 aa16.03■□□□□ 0.16
SMPDL3B-201ENST00000373888 STYXL1Q9Y6J8 313 aa16.03■□□□□ 0.16
SMPDL3B-201ENST00000373888 CNTNAP2Q9UHC6 1331 aa16.03■□□□□ 0.16
SMPDL3B-201ENST00000373888 TTLL13PA6NNM8 815 aa16.02■□□□□ 0.15
SMPDL3B-201ENST00000373888 DCDC2CA8MYV0 355 aa16.02■□□□□ 0.15
SMPDL3B-201ENST00000373888 TISP43B9A030 160 aa16.02■□□□□ 0.15
SMPDL3B-201ENST00000373888 ANKRD63C9JTQ0 380 aa16.02■□□□□ 0.15
SMPDL3B-201ENST00000373888 NR3C1P04150 777 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms