RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 KMT5AQ9NQR1 393 aa9.46□□□□□ -0.9
SNRNP40-202ENST00000373720 CYP26B1Q9NR63 512 aa9.46□□□□□ -0.9
SNRNP40-202ENST00000373720 HSPBP1Q9NZL4 362 aa9.46□□□□□ -0.9
SNRNP40-202ENST00000373720 SUCLA2Q9P2R7 463 aaPredicted RBP9.46□□□□□ -0.9
SNRNP40-202ENST00000373720 ADAMTS1Q9UHI8 967 aa9.46□□□□□ -0.9
SNRNP40-202ENST00000373720 PNMA3Q9UL41 463 aa9.46□□□□□ -0.9
SNRNP40-202ENST00000373720 NENFQ9UMX5 172 aa9.46□□□□□ -0.9
SNRNP40-202ENST00000373720 L1RE1Q9UN81 338 aa9.46□□□□□ -0.9
SNRNP40-202ENST00000373720 KCNH4Q9UQ05 1017 aa9.46□□□□□ -0.9
SNRNP40-202ENST00000373720 PHIPQ8WWQ0 1821 aa9.45□□□□□ -0.9
SNRNP40-202ENST00000373720 A0A0G2JLL6 359 aaPredicted RBP9.45□□□□□ -0.9
SNRNP40-202ENST00000373720 MACROD2A1Z1Q3 448 aa9.45□□□□□ -0.9
SNRNP40-202ENST00000373720 ZNF233A6NK53 670 aa9.45□□□□□ -0.9
SNRNP40-202ENST00000373720 SPDYE16A6NNV3 312 aaPredicted RBP9.45□□□□□ -0.9
SNRNP40-202ENST00000373720 EPHB6O15197 1021 aa9.45□□□□□ -0.9
SNRNP40-202ENST00000373720 ASAP2O43150 1006 aa9.45□□□□□ -0.9
SNRNP40-202ENST00000373720 ATP1A1P05023 1023 aaKnown RBP9.45□□□□□ -0.9
SNRNP40-202ENST00000373720 SUPT20HL2P0C7V6 817 aa9.45□□□□□ -0.9
SNRNP40-202ENST00000373720 SLC9A1P19634 815 aa9.45□□□□□ -0.9
SNRNP40-202ENST00000373720 OSBPP22059 807 aa9.45□□□□□ -0.9
SNRNP40-202ENST00000373720 CNGA1P29973 690 aa9.45□□□□□ -0.9
SNRNP40-202ENST00000373720 GPC3P51654 580 aa9.45□□□□□ -0.9
SNRNP40-202ENST00000373720 HMGCS2P54868 508 aa9.45□□□□□ -0.9
SNRNP40-202ENST00000373720 NAP1L1P55209 391 aaKnown RBP9.45□□□□□ -0.9
SNRNP40-202ENST00000373720 CYP27A1Q02318 531 aa9.45□□□□□ -0.9
SNRNP40-202ENST00000373720 RASSF7Q02833 373 aa9.45□□□□□ -0.9
SNRNP40-202ENST00000373720 PTK2Q05397 1052 aa9.45□□□□□ -0.9
SNRNP40-202ENST00000373720 GFPT1Q06210 699 aaPredicted RBP9.45□□□□□ -0.9
SNRNP40-202ENST00000373720 POU5F1BQ06416 359 aa9.45□□□□□ -0.9
SNRNP40-202ENST00000373720 PPIL2Q13356 520 aa9.45□□□□□ -0.9
SNRNP40-202ENST00000373720 MXD4Q14582 209 aaPredicted RBP9.45□□□□□ -0.9
SNRNP40-202ENST00000373720 TMEM132BQ14DG7 1078 aa9.45□□□□□ -0.9
SNRNP40-202ENST00000373720 RPS6KA1Q15418 735 aa9.45□□□□□ -0.9
SNRNP40-202ENST00000373720 KYAT1Q16773 422 aa9.45□□□□□ -0.9
SNRNP40-202ENST00000373720 LONRF2Q1L5Z9 754 aa9.45□□□□□ -0.9
SNRNP40-202ENST00000373720 BEND6Q5SZJ8 279 aaPredicted RBP9.45□□□□□ -0.9
SNRNP40-202ENST00000373720 ZPBP2Q6X784 338 aa9.45□□□□□ -0.9
SNRNP40-202ENST00000373720 SLC30A10Q6XR72 485 aa9.45□□□□□ -0.9
SNRNP40-202ENST00000373720 PLPPR4Q7Z2D5 763 aa9.45□□□□□ -0.9
SNRNP40-202ENST00000373720 PRRT2Q7Z6L0 340 aaPredicted RBP9.45□□□□□ -0.9
SNRNP40-202ENST00000373720 CREG2Q8IUH2 290 aa9.45□□□□□ -0.9
SNRNP40-202ENST00000373720 IFT20Q8IY31 132 aa9.45□□□□□ -0.9
SNRNP40-202ENST00000373720 ANKRD35Q8N283 1001 aa9.45□□□□□ -0.9
SNRNP40-202ENST00000373720 FAM133AQ8N9E0 248 aa9.45□□□□□ -0.9
SNRNP40-202ENST00000373720 TMEM161BQ8NDZ6 487 aa9.45□□□□□ -0.9
SNRNP40-202ENST00000373720 SPATA4Q8NEY3 305 aa9.45□□□□□ -0.9
SNRNP40-202ENST00000373720 SLC30A5Q8TAD4 765 aa9.45□□□□□ -0.9
SNRNP40-202ENST00000373720 RFFLQ8WZ73 363 aa9.45□□□□□ -0.9
SNRNP40-202ENST00000373720 EEF2KMTQ96G04 330 aa9.45□□□□□ -0.9
SNRNP40-202ENST00000373720 CEP170P1Q96L14 293 aa9.45□□□□□ -0.9
SNRNP40-202ENST00000373720 INTS2Q9H0H0 1204 aaKnown RBP9.45□□□□□ -0.9
SNRNP40-202ENST00000373720 ANKZF1Q9H8Y5 726 aa9.45□□□□□ -0.9
SNRNP40-202ENST00000373720 SIX2Q9NPC8 291 aa9.45□□□□□ -0.9
SNRNP40-202ENST00000373720 A1CFQ9NQ94 594 aaKnown RBP9.45□□□□□ -0.9
SNRNP40-202ENST00000373720 GGA3Q9NZ52 723 aa9.45□□□□□ -0.9
SNRNP40-202ENST00000373720 DNAJC12Q9UKB3 198 aa9.45□□□□□ -0.9
SNRNP40-202ENST00000373720 LHX6Q9UPM6 363 aa9.45□□□□□ -0.9
SNRNP40-202ENST00000373720 FHOD1Q9Y613 1164 aa9.45□□□□□ -0.9
SNRNP40-202ENST00000373720 SSC5DA1L4H1 1573 aa9.45□□□□□ -0.9
SNRNP40-202ENST00000373720 PARP14Q460N5 1801 aa9.45□□□□□ -0.9
SNRNP40-202ENST00000373720 A0A087X0T9 212 aa9.44□□□□□ -0.9
SNRNP40-202ENST00000373720 IQCA1LA6NCM1 817 aa9.44□□□□□ -0.9
SNRNP40-202ENST00000373720 SPDYE5A6NIY4 337 aa9.44□□□□□ -0.9
SNRNP40-202ENST00000373720 ASB14A6NK59 587 aa9.44□□□□□ -0.9
SNRNP40-202ENST00000373720 STK25O00506 426 aa9.44□□□□□ -0.9
SNRNP40-202ENST00000373720 MTA2O94776 668 aa9.44□□□□□ -0.9
SNRNP40-202ENST00000373720 GGPS1O95749 300 aa9.44□□□□□ -0.9
SNRNP40-202ENST00000373720 FAM228BP0C875 321 aa9.44□□□□□ -0.9
SNRNP40-202ENST00000373720 MYBL1P10243 752 aa9.44□□□□□ -0.9
SNRNP40-202ENST00000373720 TNFAIP3P21580 790 aa9.44□□□□□ -0.9
SNRNP40-202ENST00000373720 NPTX2P47972 431 aa9.44□□□□□ -0.9
SNRNP40-202ENST00000373720 MXI1P50539 228 aa9.44□□□□□ -0.9
SNRNP40-202ENST00000373720 ACTR2P61160 394 aa9.44□□□□□ -0.9
SNRNP40-202ENST00000373720 FKBP1BP68106 108 aa9.44□□□□□ -0.9
SNRNP40-202ENST00000373720 CDC42EP1Q00587 391 aa9.44□□□□□ -0.9
SNRNP40-202ENST00000373720 SNRNP35Q16560 246 aaKnown RBP9.44□□□□□ -0.9
SNRNP40-202ENST00000373720 EPC2Q52LR7 807 aa9.44□□□□□ -0.9
SNRNP40-202ENST00000373720 ZC2HC1CQ53FD0 456 aaPredicted RBP9.44□□□□□ -0.9
SNRNP40-202ENST00000373720 SPDYCQ5MJ68 293 aa9.44□□□□□ -0.9
SNRNP40-202ENST00000373720 TRIM72Q6ZMU5 477 aa9.44□□□□□ -0.9
SNRNP40-202ENST00000373720 ANO5Q75V66 913 aa9.44□□□□□ -0.9
SNRNP40-202ENST00000373720 ARMC9Q7Z3E5 817 aa9.44□□□□□ -0.9
SNRNP40-202ENST00000373720 MAATS1Q7Z4T9 603 aa9.44□□□□□ -0.9
SNRNP40-202ENST00000373720 PNMA8AQ86V59 439 aaPredicted RBP9.44□□□□□ -0.9
SNRNP40-202ENST00000373720 EFCAB13Q8IY85 973 aa9.44□□□□□ -0.9
SNRNP40-202ENST00000373720 ABRAQ8N0Z2 381 aa9.44□□□□□ -0.9
SNRNP40-202ENST00000373720 GPD1LQ8N335 351 aa9.44□□□□□ -0.9
SNRNP40-202ENST00000373720 C1orf131Q8NDD1 294 aaKnown RBP9.44□□□□□ -0.9
SNRNP40-202ENST00000373720 FBXL13Q8NEE6 735 aa9.44□□□□□ -0.9
SNRNP40-202ENST00000373720 SEPT1Q8WYJ6 367 aa9.44□□□□□ -0.9
SNRNP40-202ENST00000373720 RPS6KC1Q96S38 1066 aa9.44□□□□□ -0.9
SNRNP40-202ENST00000373720 CRACR2AQ9BSW2 395 aa9.44□□□□□ -0.9
SNRNP40-202ENST00000373720 MFRPQ9BY79 579 aa9.44□□□□□ -0.9
SNRNP40-202ENST00000373720 FUT8Q9BYC5 575 aa9.44□□□□□ -0.9
SNRNP40-202ENST00000373720 FGFBP2Q9BYJ0 223 aa9.44□□□□□ -0.9
SNRNP40-202ENST00000373720 UBXN6Q9BZV1 441 aa9.44□□□□□ -0.9
SNRNP40-202ENST00000373720 ISCUQ9H1K1 167 aa9.44□□□□□ -0.9
SNRNP40-202ENST00000373720 C2orf40Q9H1Z8 148 aa9.44□□□□□ -0.9
SNRNP40-202ENST00000373720 CARD9Q9H257 536 aa9.44□□□□□ -0.9
SNRNP40-202ENST00000373720 DHX33Q9H6R0 707 aaKnown RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms