RNA–Protein interactions for RNA: ENST00000373492.6

PBX3-205, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best)

Gene PBX3, Length 950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-205ENST00000373492 HPSEQ9Y251 543 aa20.24■□□□□ 0.83
PBX3-205ENST00000373492 TRIP11Q15643 1979 aa20.24■□□□□ 0.83
PBX3-205ENST00000373492 CITO14578 2027 aa20.24■□□□□ 0.83
PBX3-205ENST00000373492 COL4A6Q14031 1691 aa20.23■□□□□ 0.83
PBX3-205ENST00000373492 SFI1A8K8P3 1242 aa20.23■□□□□ 0.83
PBX3-205ENST00000373492 C9IYK1 514 aa20.23■□□□□ 0.83
PBX3-205ENST00000373492 DGKIO75912 1065 aa20.23■□□□□ 0.83
PBX3-205ENST00000373492 PLS3P13797 630 aa20.23■□□□□ 0.83
PBX3-205ENST00000373492 EFNA5P52803 228 aa20.23■□□□□ 0.83
PBX3-205ENST00000373492 FAM189BP81408 668 aa20.23■□□□□ 0.83
PBX3-205ENST00000373492 CDCA2Q69YH5 1023 aaPredicted RBP20.23■□□□□ 0.83
PBX3-205ENST00000373492 ARNTL2Q8WYA1 636 aa20.23■□□□□ 0.83
PBX3-205ENST00000373492 ZNF689Q96CS4 500 aaPredicted RBP20.23■□□□□ 0.83
PBX3-205ENST00000373492 ZHX3Q9H4I2 956 aa20.23■□□□□ 0.83
PBX3-205ENST00000373492 MINDY3Q9H8M7 445 aa20.23■□□□□ 0.83
PBX3-205ENST00000373492 RC3H2Q9HBD1 1191 aaKnown RBP20.23■□□□□ 0.83
PBX3-205ENST00000373492 PARVGQ9HBI0 331 aa20.23■□□□□ 0.83
PBX3-205ENST00000373492 CHST12Q9NRB3 414 aa20.23■□□□□ 0.83
PBX3-205ENST00000373492 KBTBD4Q9NVX7 518 aa20.23■□□□□ 0.83
PBX3-205ENST00000373492 LRFN2Q9ULH4 789 aa20.23■□□□□ 0.83
PBX3-205ENST00000373492 PCDHB7Q9Y5E2 793 aa20.23■□□□□ 0.83
PBX3-205ENST00000373492 PHLPP2Q6ZVD8 1323 aa20.23■□□□□ 0.83
PBX3-205ENST00000373492 FAM237AA0A1B0GTK4 181 aa20.22■□□□□ 0.83
PBX3-205ENST00000373492 MYMKA6NI61 221 aa20.22■□□□□ 0.83
PBX3-205ENST00000373492 SLFN14P0C7P3 912 aa20.22■□□□□ 0.83
PBX3-205ENST00000373492 NPTX2P47972 431 aa20.22■□□□□ 0.83
PBX3-205ENST00000373492 NDUFA8P51970 172 aa20.22■□□□□ 0.83
PBX3-205ENST00000373492 MBTD1Q05BQ5 628 aa20.22■□□□□ 0.83
PBX3-205ENST00000373492 MAPK6Q16659 721 aa20.22■□□□□ 0.83
PBX3-205ENST00000373492 MYCT1Q8N699 235 aa20.22■□□□□ 0.83
PBX3-205ENST00000373492 STAMQ92783 540 aa20.22■□□□□ 0.83
PBX3-205ENST00000373492 SAMD11Q96NU1 681 aa20.22■□□□□ 0.83
PBX3-205ENST00000373492 ELAC1Q9H777 363 aaKnown RBP20.22■□□□□ 0.83
PBX3-205ENST00000373492 CERS4Q9HA82 394 aa20.22■□□□□ 0.83
PBX3-205ENST00000373492 PRMT7Q9NVM4 692 aaPredicted RBP20.22■□□□□ 0.83
PBX3-205ENST00000373492 DACT1Q9NYF0 836 aa20.22■□□□□ 0.83
PBX3-205ENST00000373492 CHD7Q9P2D1 2997 aa20.22■□□□□ 0.83
PBX3-205ENST00000373492 SERTAD1Q9UHV2 236 aa20.22■□□□□ 0.83
PBX3-205ENST00000373492 PIN4Q9Y237 131 aaKnown RBP20.22■□□□□ 0.83
PBX3-205ENST00000373492 RALGAPA2Q2PPJ7 1873 aa20.22■□□□□ 0.83
PBX3-205ENST00000373492 COL6A3P12111 3177 aa20.21■□□□□ 0.83
PBX3-205ENST00000373492 H0YCG3 227 aa20.21■□□□□ 0.83
PBX3-205ENST00000373492 AXLP30530 894 aa20.21■□□□□ 0.83
PBX3-205ENST00000373492 FIBCD1Q8N539 461 aa20.21■□□□□ 0.83
PBX3-205ENST00000373492 SPIRE2Q8WWL2 714 aa20.21■□□□□ 0.83
PBX3-205ENST00000373492 CCDC34Q96HJ3 373 aa20.21■□□□□ 0.83
PBX3-205ENST00000373492 PRIMPOLQ96LW4 560 aa20.21■□□□□ 0.83
PBX3-205ENST00000373492 AGPAT5Q9NUQ2 364 aa20.21■□□□□ 0.83
PBX3-205ENST00000373492 ADGRA3Q8IWK6 1321 aa20.21■□□□□ 0.83
PBX3-205ENST00000373492 KIAA1671Q9BY89 1806 aa20.2■□□□□ 0.82
PBX3-205ENST00000373492 K7ERI5 159 aa20.2■□□□□ 0.82
PBX3-205ENST00000373492 IDEP14735 1019 aa20.2■□□□□ 0.82
PBX3-205ENST00000373492 POU3F3P20264 500 aaPredicted RBP20.2■□□□□ 0.82
PBX3-205ENST00000373492 ZNF131P52739 623 aa20.2■□□□□ 0.82
PBX3-205ENST00000373492 ADGRE1Q14246 886 aa20.2■□□□□ 0.82
PBX3-205ENST00000373492 TWF2Q6IBS0 349 aaKnown RBP20.2■□□□□ 0.82
PBX3-205ENST00000373492 CMTR2Q8IYT2 770 aaKnown RBP20.2■□□□□ 0.82
PBX3-205ENST00000373492 TMEM87AQ8NBN3 555 aa20.2■□□□□ 0.82
PBX3-205ENST00000373492 MAFAQ8NHW3 353 aaPredicted RBP20.2■□□□□ 0.82
PBX3-205ENST00000373492 DNAJC19Q96DA6 116 aa20.2■□□□□ 0.82
PBX3-205ENST00000373492 GBP4Q96PP9 640 aa20.2■□□□□ 0.82
PBX3-205ENST00000373492 NTPCRQ9BSD7 190 aaKnown RBP20.2■□□□□ 0.82
PBX3-205ENST00000373492 KIFC3Q9BVG8 833 aa20.2■□□□□ 0.82
PBX3-205ENST00000373492 GOLPH3LQ9H4A5 285 aa20.2■□□□□ 0.82
PBX3-205ENST00000373492 TMEM161AQ9NX61 479 aa20.2■□□□□ 0.82
PBX3-205ENST00000373492 EPOPA6NHQ4 379 aa20.19■□□□□ 0.82
PBX3-205ENST00000373492 SLC16A4O15374 487 aa20.19■□□□□ 0.82
PBX3-205ENST00000373492 ACTN4O43707 911 aaKnown RBP20.19■□□□□ 0.82
PBX3-205ENST00000373492 TRAK2O60296 914 aa20.19■□□□□ 0.82
PBX3-205ENST00000373492 ZNF202O95125 648 aa20.19■□□□□ 0.82
PBX3-205ENST00000373492 PRKCBP05771 671 aa20.19■□□□□ 0.82
PBX3-205ENST00000373492 GAP43P17677 238 aa20.19■□□□□ 0.82
PBX3-205ENST00000373492 LIG1P18858 919 aa20.19■□□□□ 0.82
PBX3-205ENST00000373492 SCP2P22307 547 aa20.19■□□□□ 0.82
PBX3-205ENST00000373492 IGFBP4P22692 258 aa20.19■□□□□ 0.82
PBX3-205ENST00000373492 ABCD1P33897 745 aa20.19■□□□□ 0.82
PBX3-205ENST00000373492 AFMP43652 599 aa20.19■□□□□ 0.82
PBX3-205ENST00000373492 BTG3Q14201 252 aaPredicted RBP20.19■□□□□ 0.82
PBX3-205ENST00000373492 FAM187BQ17R55 369 aa20.19■□□□□ 0.82
PBX3-205ENST00000373492 TMEM132AQ24JP5 1023 aa20.19■□□□□ 0.82
PBX3-205ENST00000373492 PPP4R3CPQ6ZMV5 832 aa20.19■□□□□ 0.82
PBX3-205ENST00000373492 SPRED2Q7Z698 418 aa20.19■□□□□ 0.82
PBX3-205ENST00000373492 CCDC65Q8IXS2 484 aa20.19■□□□□ 0.82
PBX3-205ENST00000373492 SLC17A8Q8NDX2 589 aa20.19■□□□□ 0.82
PBX3-205ENST00000373492 TRAIPQ9BWF2 469 aa20.19■□□□□ 0.82
PBX3-205ENST00000373492 TRIM9Q9C026 710 aa20.19■□□□□ 0.82
PBX3-205ENST00000373492 FZD8Q9H461 694 aa20.19■□□□□ 0.82
PBX3-205ENST00000373492 TMEM134Q9H6X4 195 aa20.19■□□□□ 0.82
PBX3-205ENST00000373492 ARHGAP28Q9P2N2 729 aa20.19■□□□□ 0.82
PBX3-205ENST00000373492 SEL1LQ9UBV2 794 aa20.19■□□□□ 0.82
PBX3-205ENST00000373492 RWDD3Q9Y3V2 267 aa20.19■□□□□ 0.82
PBX3-205ENST00000373492 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.18■□□□□ 0.82
PBX3-205ENST00000373492 A0A0U1RQF3 1178 aa20.18■□□□□ 0.82
PBX3-205ENST00000373492 RFXAPO00287 272 aa20.18■□□□□ 0.82
PBX3-205ENST00000373492 TSPAN1O60635 241 aa20.18■□□□□ 0.82
PBX3-205ENST00000373492 NCKAP1LP55160 1127 aa20.18■□□□□ 0.82
PBX3-205ENST00000373492 ASIC1P78348 528 aa20.18■□□□□ 0.82
PBX3-205ENST00000373492 STRN3Q13033 797 aa20.18■□□□□ 0.82
PBX3-205ENST00000373492 PRPF4BQ13523 1007 aaKnown RBP20.18■□□□□ 0.82
PBX3-205ENST00000373492 LONRF3Q496Y0 759 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms