RNA–Protein interactions for RNA: ENST00000373482.6

PBX3-202, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best)

Gene PBX3, Length 1,130 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-202ENST00000373482 UPP2O95045 317 aa20.18■□□□□ 0.82
PBX3-202ENST00000373482 SARSP49591 514 aaKnown RBP20.18■□□□□ 0.82
PBX3-202ENST00000373482 NCKAP1LP55160 1127 aa20.18■□□□□ 0.82
PBX3-202ENST00000373482 ASIC1P78348 528 aa20.18■□□□□ 0.82
PBX3-202ENST00000373482 STRN3Q13033 797 aa20.18■□□□□ 0.82
PBX3-202ENST00000373482 PRPF4BQ13523 1007 aaKnown RBP20.18■□□□□ 0.82
PBX3-202ENST00000373482 LONRF3Q496Y0 759 aa20.18■□□□□ 0.82
PBX3-202ENST00000373482 NOTUMQ6P988 496 aa20.18■□□□□ 0.82
PBX3-202ENST00000373482 CLEC17AQ6ZS10 378 aa20.18■□□□□ 0.82
PBX3-202ENST00000373482 FAM178BQ8IXR5 827 aa20.18■□□□□ 0.82
PBX3-202ENST00000373482 CNNM3Q8NE01 707 aa20.18■□□□□ 0.82
PBX3-202ENST00000373482 TOP1MTQ969P6 601 aa20.18■□□□□ 0.82
PBX3-202ENST00000373482 C7orf25Q9BPX7 421 aa20.18■□□□□ 0.82
PBX3-202ENST00000373482 CCDC113Q9H0I3 377 aa20.18■□□□□ 0.82
PBX3-202ENST00000373482 PANK4Q9NVE7 773 aa20.18■□□□□ 0.82
PBX3-202ENST00000373482 RANBP2P49792 3224 aaKnown RBP20.17■□□□□ 0.82
PBX3-202ENST00000373482 C9IYK1 514 aa20.17■□□□□ 0.82
PBX3-202ENST00000373482 K7ENM7 598 aa20.17■□□□□ 0.82
PBX3-202ENST00000373482 ACKR2O00590 384 aa20.17■□□□□ 0.82
PBX3-202ENST00000373482 SKIP12755 728 aa20.17■□□□□ 0.82
PBX3-202ENST00000373482 FAM160A1Q05DH4 1040 aa20.17■□□□□ 0.82
PBX3-202ENST00000373482 AMHR2Q16671 573 aa20.17■□□□□ 0.82
PBX3-202ENST00000373482 HERC4Q5GLZ8 1057 aaPredicted RBP20.17■□□□□ 0.82
PBX3-202ENST00000373482 KANK3Q6NY19 840 aa20.17■□□□□ 0.82
PBX3-202ENST00000373482 CNNM4Q6P4Q7 775 aa20.17■□□□□ 0.82
PBX3-202ENST00000373482 SFR1Q86XK3 245 aa20.17■□□□□ 0.82
PBX3-202ENST00000373482 HERC6Q8IVU3 1022 aa20.17■□□□□ 0.82
PBX3-202ENST00000373482 CCDC51Q96ER9 411 aa20.17■□□□□ 0.82
PBX3-202ENST00000373482 PCDHB7Q9Y5E2 793 aa20.17■□□□□ 0.82
PBX3-202ENST00000373482 PDCD11Q14690 1871 aaKnown RBP20.16■□□□□ 0.82
PBX3-202ENST00000373482 MYL1P05976 194 aa20.16■□□□□ 0.82
PBX3-202ENST00000373482 MAPTP10636 758 aaKnown RBP20.16■□□□□ 0.82
PBX3-202ENST00000373482 ARF4P18085 180 aaPredicted RBP20.16■□□□□ 0.82
PBX3-202ENST00000373482 IBSPP21815 317 aaPredicted RBP20.16■□□□□ 0.82
PBX3-202ENST00000373482 RAB27AP51159 221 aa20.16■□□□□ 0.82
PBX3-202ENST00000373482 UBE2HP62256 183 aa20.16■□□□□ 0.82
PBX3-202ENST00000373482 SMAD3P84022 425 aaKnown RBP20.16■□□□□ 0.82
PBX3-202ENST00000373482 HABP4Q5JVS0 413 aaKnown RBP20.16■□□□□ 0.82
PBX3-202ENST00000373482 FAM117BQ6P1L5 589 aa20.16■□□□□ 0.82
PBX3-202ENST00000373482 KRBA2Q6ZNG9 492 aa20.16■□□□□ 0.82
PBX3-202ENST00000373482 HAUS6Q7Z4H7 955 aa20.16■□□□□ 0.82
PBX3-202ENST00000373482 NPAS4Q8IUM7 802 aa20.16■□□□□ 0.82
PBX3-202ENST00000373482 FMR1NBQ8N0W7 255 aaPredicted RBP20.16■□□□□ 0.82
PBX3-202ENST00000373482 TMEM161BQ8NDZ6 487 aa20.16■□□□□ 0.82
PBX3-202ENST00000373482 PAGE5Q96GU1 130 aa20.16■□□□□ 0.82
PBX3-202ENST00000373482 CPB2Q96IY4 423 aa20.16■□□□□ 0.82
PBX3-202ENST00000373482 TRAIPQ9BWF2 469 aa20.16■□□□□ 0.82
PBX3-202ENST00000373482 ELAC1Q9H777 363 aaKnown RBP20.16■□□□□ 0.82
PBX3-202ENST00000373482 MSRAQ9UJ68 235 aa20.16■□□□□ 0.82
PBX3-202ENST00000373482 MYO9BQ13459 2157 aa20.16■□□□□ 0.82
PBX3-202ENST00000373482 CNTNAP2Q9UHC6 1331 aa20.16■□□□□ 0.82
PBX3-202ENST00000373482 A0A0U1RQF3 1178 aa20.15■□□□□ 0.82
PBX3-202ENST00000373482 FRMD3A2A2Y4 597 aa20.15■□□□□ 0.82
PBX3-202ENST00000373482 N4BP3O15049 544 aa20.15■□□□□ 0.82
PBX3-202ENST00000373482 B4GALT5O43286 388 aa20.15■□□□□ 0.82
PBX3-202ENST00000373482 TLL1O43897 1013 aa20.15■□□□□ 0.82
PBX3-202ENST00000373482 PRPF40AO75400 957 aaKnown RBP20.15■□□□□ 0.82
PBX3-202ENST00000373482 GJB5O95377 273 aa20.15■□□□□ 0.82
PBX3-202ENST00000373482 HOXA11P31270 313 aaPredicted RBP20.15■□□□□ 0.82
PBX3-202ENST00000373482 RAB30Q15771 203 aa20.15■□□□□ 0.82
PBX3-202ENST00000373482 SLC27A1Q6PCB7 646 aa20.15■□□□□ 0.82
PBX3-202ENST00000373482 GRAMD1CQ8IYS0 662 aa20.15■□□□□ 0.82
PBX3-202ENST00000373482 ADPGKQ9BRR6 497 aa20.15■□□□□ 0.82
PBX3-202ENST00000373482 MRPL4Q9BYD3 311 aaKnown RBP20.15■□□□□ 0.82
PBX3-202ENST00000373482 TRIM6Q9C030 488 aaPredicted RBP20.15■□□□□ 0.82
PBX3-202ENST00000373482 BLZF1Q9H2G9 400 aa20.15■□□□□ 0.82
PBX3-202ENST00000373482 MRPL44Q9H9J2 332 aaKnown RBP20.15■□□□□ 0.82
PBX3-202ENST00000373482 FAM105AQ9NUU6 356 aa20.15■□□□□ 0.82
PBX3-202ENST00000373482 TMEM161AQ9NX61 479 aa20.15■□□□□ 0.82
PBX3-202ENST00000373482 INSL6Q9Y581 213 aa20.15■□□□□ 0.82
PBX3-202ENST00000373482 PCDHA11Q9Y5I1 949 aa20.15■□□□□ 0.82
PBX3-202ENST00000373482 A0A1B0GUA9 196 aa20.14■□□□□ 0.81
PBX3-202ENST00000373482 GRXCR1A8MXD5 290 aa20.14■□□□□ 0.81
PBX3-202ENST00000373482 GOLGA6L22H0YM25 854 aa20.14■□□□□ 0.81
PBX3-202ENST00000373482 GTPBP6O43824 516 aaPredicted RBP20.14■□□□□ 0.81
PBX3-202ENST00000373482 GADD45BO75293 160 aaPredicted RBP20.14■□□□□ 0.81
PBX3-202ENST00000373482 NMT1P30419 496 aaKnown RBP20.14■□□□□ 0.81
PBX3-202ENST00000373482 FAM189BP81408 668 aa20.14■□□□□ 0.81
PBX3-202ENST00000373482 COASYQ13057 564 aa20.14■□□□□ 0.81
PBX3-202ENST00000373482 CUL4BQ13620 913 aa20.14■□□□□ 0.81
PBX3-202ENST00000373482 FAM109BQ6ICB4 259 aaPredicted RBP20.14■□□□□ 0.81
PBX3-202ENST00000373482 UNC13DQ70J99 1090 aa20.14■□□□□ 0.81
PBX3-202ENST00000373482 APBB1IPQ7Z5R6 666 aaPredicted RBP20.14■□□□□ 0.81
PBX3-202ENST00000373482 TMCO2Q7Z6W1 182 aaPredicted RBP20.14■□□□□ 0.81
PBX3-202ENST00000373482 ECHDC2Q86YB7 292 aa20.14■□□□□ 0.81
PBX3-202ENST00000373482 OLFML3Q9NRN5 406 aa20.14■□□□□ 0.81
PBX3-202ENST00000373482 PVALEFA0A1B0GWK0 134 aa20.13■□□□□ 0.81
PBX3-202ENST00000373482 EOMESO95936 686 aa20.13■□□□□ 0.81
PBX3-202ENST00000373482 RABGGTBP53611 331 aa20.13■□□□□ 0.81
PBX3-202ENST00000373482 SNW1Q13573 536 aaKnown RBP20.13■□□□□ 0.81
PBX3-202ENST00000373482 ATF7IP2Q5U623 682 aa20.13■□□□□ 0.81
PBX3-202ENST00000373482 ENGASEQ8NFI3 743 aa20.13■□□□□ 0.81
PBX3-202ENST00000373482 KCNN1Q92952 543 aa20.13■□□□□ 0.81
PBX3-202ENST00000373482 CCDC47Q96A33 483 aaKnown RBP20.13■□□□□ 0.81
PBX3-202ENST00000373482 HVCN1Q96D96 273 aa20.13■□□□□ 0.81
PBX3-202ENST00000373482 TIGD1Q96MW7 591 aa20.13■□□□□ 0.81
PBX3-202ENST00000373482 YME1L1Q96TA2 773 aa20.13■□□□□ 0.81
PBX3-202ENST00000373482 RAD9AQ99638 391 aa20.13■□□□□ 0.81
PBX3-202ENST00000373482 PBX4Q9BYU1 374 aa20.13■□□□□ 0.81
PBX3-202ENST00000373482 ST6GALNAC4Q9H4F1 302 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms