RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 CATSPER1Q8NEC5 780 aa15.12■□□□□ 0.01
LMX1B-202ENST00000373474 RFFLQ8WZ73 363 aa15.12■□□□□ 0.01
LMX1B-202ENST00000373474 CELF1Q92879 486 aaKnown RBP15.12■□□□□ 0.01
LMX1B-202ENST00000373474 LRRC4Q9HBW1 653 aa15.12■□□□□ 0.01
LMX1B-202ENST00000373474 MAGED2Q9UNF1 606 aaPredicted RBP15.12■□□□□ 0.01
LMX1B-202ENST00000373474 IQGAP1P46940 1657 aa15.12■□□□□ 0.01
LMX1B-202ENST00000373474 GTPBP10A4D1E9 387 aaKnown RBP15.12■□□□□ 0.01
LMX1B-202ENST00000373474 SLC16A4O15374 487 aa15.12■□□□□ 0.01
LMX1B-202ENST00000373474 SLC16A3O15427 465 aaKnown RBP15.12■□□□□ 0.01
LMX1B-202ENST00000373474 WDR75Q8IWA0 830 aaKnown RBP15.12■□□□□ 0.01
LMX1B-202ENST00000373474 ADSSL1Q8N142 457 aa15.12■□□□□ 0.01
LMX1B-202ENST00000373474 SIX6OS1Q8N1H7 587 aa15.12■□□□□ 0.01
LMX1B-202ENST00000373474 STAG2Q8N3U4 1231 aa15.12■□□□□ 0.01
LMX1B-202ENST00000373474 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.12■□□□□ 0.01
LMX1B-202ENST00000373474 ATP6V1E2Q96A05 226 aa15.12■□□□□ 0.01
LMX1B-202ENST00000373474 TTC17Q96AE7 1141 aa15.12■□□□□ 0.01
LMX1B-202ENST00000373474 LRRC1Q9BTT6 524 aa15.12■□□□□ 0.01
LMX1B-202ENST00000373474 CCSER1Q9C0I3 900 aa15.12■□□□□ 0.01
LMX1B-202ENST00000373474 SUFUQ9UMX1 484 aa15.12■□□□□ 0.01
LMX1B-202ENST00000373474 INO80Q9ULG1 1556 aaPredicted RBP15.12■□□□□ 0.01
LMX1B-202ENST00000373474 DEAF1O75398 565 aaPredicted RBP15.12■□□□□ 0.01
LMX1B-202ENST00000373474 SRGAP2CP0DJJ0 459 aa15.12■□□□□ 0.01
LMX1B-202ENST00000373474 PDIA5Q14554 519 aa15.12■□□□□ 0.01
LMX1B-202ENST00000373474 MASTLQ96GX5 879 aa15.12■□□□□ 0.01
LMX1B-202ENST00000373474 C7orf25Q9BPX7 421 aa15.12■□□□□ 0.01
LMX1B-202ENST00000373474 STRIP2Q9ULQ0 834 aa15.12■□□□□ 0.01
LMX1B-202ENST00000373474 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.12■□□□□ 0.01
LMX1B-202ENST00000373474 TRPC1P48995 793 aa15.11■□□□□ 0.01
LMX1B-202ENST00000373474 SUPT20HL1Q3ZLR7 823 aa15.11■□□□□ 0.01
LMX1B-202ENST00000373474 TMEM35BQ8NCS4 154 aa15.11■□□□□ 0.01
LMX1B-202ENST00000373474 ICA1LQ8NDH6 482 aa15.11■□□□□ 0.01
LMX1B-202ENST00000373474 OR9Q1Q8NGQ5 310 aa15.11■□□□□ 0.01
LMX1B-202ENST00000373474 CHMP6Q96FZ7 201 aa15.11■□□□□ 0.01
LMX1B-202ENST00000373474 ECT2Q9H8V3 914 aa15.11■□□□□ 0.01
LMX1B-202ENST00000373474 ASNSD1Q9NWL6 643 aa15.11■□□□□ 0.01
LMX1B-202ENST00000373474 NDE1Q9NXR1 346 aa15.11■□□□□ 0.01
LMX1B-202ENST00000373474 IP6K2Q9UHH9 426 aa15.11■□□□□ 0.01
LMX1B-202ENST00000373474 FBXL5Q9UKA1 691 aa15.11■□□□□ 0.01
LMX1B-202ENST00000373474 WDR64B1ANS9 1081 aa15.11■□□□□ 0.01
LMX1B-202ENST00000373474 NBPF26B4DH59 902 aa15.11■□□□□ 0.01
LMX1B-202ENST00000373474 CHEK2O96017 543 aa15.11■□□□□ 0.01
LMX1B-202ENST00000373474 TRIM28Q13263 835 aaKnown RBP15.11■□□□□ 0.01
LMX1B-202ENST00000373474 BRINP3Q76B58 766 aa15.11■□□□□ 0.01
LMX1B-202ENST00000373474 NBPF15Q8N660 670 aa15.11■□□□□ 0.01
LMX1B-202ENST00000373474 TEX9Q8N6V9 391 aa15.11■□□□□ 0.01
LMX1B-202ENST00000373474 DDX28Q9NUL7 540 aaKnown RBP15.11■□□□□ 0.01
LMX1B-202ENST00000373474 ZNF185O15231 689 aa15.11■□□□□ 0.01
LMX1B-202ENST00000373474 PYGLP06737 847 aa15.11■□□□□ 0.01
LMX1B-202ENST00000373474 SKOR1P84550 965 aa15.11■□□□□ 0.01
LMX1B-202ENST00000373474 TMPRSS15P98073 1019 aa15.11■□□□□ 0.01
LMX1B-202ENST00000373474 CDO1Q16878 200 aa15.11■□□□□ 0.01
LMX1B-202ENST00000373474 DPP9Q86TI2 863 aa15.11■□□□□ 0.01
LMX1B-202ENST00000373474 ELOA2Q8IYF1 753 aaPredicted RBP15.11■□□□□ 0.01
LMX1B-202ENST00000373474 DCLK2Q8N568 766 aa15.11■□□□□ 0.01
LMX1B-202ENST00000373474 RAD17O75943 681 aa15.11■□□□□ 0.01
LMX1B-202ENST00000373474 TBXAS1P24557 533 aaPredicted RBP15.11■□□□□ 0.01
LMX1B-202ENST00000373474 ZNF667Q5HYK9 610 aa15.11■□□□□ 0.01
LMX1B-202ENST00000373474 C1orf146Q5VVC0 180 aa15.11■□□□□ 0.01
LMX1B-202ENST00000373474 CCDC137Q6PK04 289 aaKnown RBP15.11■□□□□ 0.01
LMX1B-202ENST00000373474 PASD1Q8IV76 773 aa15.11■□□□□ 0.01
LMX1B-202ENST00000373474 THOC1Q96FV9 657 aaKnown RBP15.11■□□□□ 0.01
LMX1B-202ENST00000373474 TGS1Q96RS0 853 aaKnown RBP15.11■□□□□ 0.01
LMX1B-202ENST00000373474 EIF2AK1Q9BQI3 630 aaKnown RBP15.11■□□□□ 0.01
LMX1B-202ENST00000373474 PTPRUQ92729 1446 aa15.11■□□□□ 0.01
LMX1B-202ENST00000373474 LRIG3Q6UXM1 1119 aa15.11■□□□□ 0.01
LMX1B-202ENST00000373474 GIMAP4Q9NUV9 329 aa15.11■□□□□ 0.01
LMX1B-202ENST00000373474 FIS1Q9Y3D6 152 aa15.11■□□□□ 0.01
LMX1B-202ENST00000373474 LRRIQ1Q96JM4 1722 aa15.1■□□□□ 0.01
LMX1B-202ENST00000373474 P4HBP07237 508 aaKnown RBP15.1■□□□□ 0.01
LMX1B-202ENST00000373474 PSMC1P62191 440 aaKnown RBP15.1■□□□□ 0.01
LMX1B-202ENST00000373474 TC2NQ8N9U0 490 aa15.1■□□□□ 0.01
LMX1B-202ENST00000373474 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.1■□□□□ 0.01
LMX1B-202ENST00000373474 NUDCD1Q96RS6 583 aa15.1■□□□□ 0.01
LMX1B-202ENST00000373474 FAM213AQ9BRX8 229 aa15.1■□□□□ 0.01
LMX1B-202ENST00000373474 RHOBTB3O94955 611 aa15.1■□□□□ 0.01
LMX1B-202ENST00000373474 CYP2C19P33261 490 aa15.1■□□□□ 0.01
LMX1B-202ENST00000373474 CEP55Q53EZ4 464 aa15.1■□□□□ 0.01
LMX1B-202ENST00000373474 FAM84BQ96KN1 310 aaPredicted RBP15.1■□□□□ 0.01
LMX1B-202ENST00000373474 KLC4Q9NSK0 619 aa15.1■□□□□ 0.01
LMX1B-202ENST00000373474 ESRRBO95718 433 aa15.1■□□□□ 0.01
LMX1B-202ENST00000373474 KRT76Q01546 638 aa15.1■□□□□ 0.01
LMX1B-202ENST00000373474 SLC30A9Q6PML9 568 aa15.1■□□□□ 0.01
LMX1B-202ENST00000373474 TMEM270Q6UE05 265 aa15.1■□□□□ 0.01
LMX1B-202ENST00000373474 FAM47EQ6ZV65 393 aa15.1■□□□□ 0.01
LMX1B-202ENST00000373474 CHP1Q99653 195 aa15.1■□□□□ 0.01
LMX1B-202ENST00000373474 DDX56Q9NY93 547 aaKnown RBP15.1■□□□□ 0.01
LMX1B-202ENST00000373474 APOBEC2Q9Y235 224 aaKnown RBP15.1■□□□□ 0.01
LMX1B-202ENST00000373474 HSPA4LO95757 839 aa15.1■□□□□ 0.01
LMX1B-202ENST00000373474 SFNP31947 248 aa15.1■□□□□ 0.01
LMX1B-202ENST00000373474 QRICH1Q2TAL8 776 aa15.1■□□□□ 0.01
LMX1B-202ENST00000373474 ARMCX2Q7L311 632 aa15.1■□□□□ 0.01
LMX1B-202ENST00000373474 NEDD1Q8NHV4 660 aa15.1■□□□□ 0.01
LMX1B-202ENST00000373474 TRIM9Q9C026 710 aa15.1■□□□□ 0.01
LMX1B-202ENST00000373474 SLC12A6Q9UHW9 1150 aa15.1■□□□□ 0.01
LMX1B-202ENST00000373474 H3BRJ5 948 aa15.09■□□□□ 0.01
LMX1B-202ENST00000373474 HAUS5O94927 633 aa15.09■□□□□ 0.01
LMX1B-202ENST00000373474 MRPL28Q13084 256 aaKnown RBP15.09■□□□□ 0.01
LMX1B-202ENST00000373474 CUL3Q13618 768 aa15.09■□□□□ 0.01
LMX1B-202ENST00000373474 TFDP2Q14188 446 aa15.09■□□□□ 0.01
LMX1B-202ENST00000373474 ARL13BQ3SXY8 428 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms