RNA–Protein interactions for RNA: ENST00000373222.3

CHD6-202, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 2,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-202ENST00000373222 KLF15Q9UIH9 416 aa6.95□□□□□ -1.3
CHD6-202ENST00000373222 IGSF9BQ9UPX0 1349 aa6.95□□□□□ -1.3
CHD6-202ENST00000373222 SSU72P8A0A1W2PR75 194 aa6.95□□□□□ -1.3
CHD6-202ENST00000373222 TARSL2A2RTX5 802 aaKnown RBP6.95□□□□□ -1.3
CHD6-202ENST00000373222 CETN3O15182 167 aa6.95□□□□□ -1.3
CHD6-202ENST00000373222 GFPT2O94808 682 aa6.95□□□□□ -1.3
CHD6-202ENST00000373222 SLITRK3O94933 977 aa6.95□□□□□ -1.3
CHD6-202ENST00000373222 FGFR1OPO95684 399 aaKnown RBP6.95□□□□□ -1.3
CHD6-202ENST00000373222 NR3C1P04150 777 aa6.95□□□□□ -1.3
CHD6-202ENST00000373222 COPB2P35606 906 aa6.95□□□□□ -1.3
CHD6-202ENST00000373222 AARSP49588 968 aaKnown RBP eCLIP6.95□□□□□ -1.3
CHD6-202ENST00000373222 CYP2J2P51589 502 aa6.95□□□□□ -1.3
CHD6-202ENST00000373222 GUCA2AQ02747 115 aa6.95□□□□□ -1.3
CHD6-202ENST00000373222 GUCY2DQ02846 1103 aa6.95□□□□□ -1.3
CHD6-202ENST00000373222 DSC3Q14574 896 aa6.95□□□□□ -1.3
CHD6-202ENST00000373222 EPHA7Q15375 998 aa6.95□□□□□ -1.3
CHD6-202ENST00000373222 NAB2Q15742 525 aa6.95□□□□□ -1.3
CHD6-202ENST00000373222 ASIC2Q16515 512 aa6.95□□□□□ -1.3
CHD6-202ENST00000373222 CBWD6Q4V339 395 aa6.95□□□□□ -1.3
CHD6-202ENST00000373222 CBWD3Q5JTY5 395 aa6.95□□□□□ -1.3
CHD6-202ENST00000373222 CBWD5Q5RIA9 395 aa6.95□□□□□ -1.3
CHD6-202ENST00000373222 STRIP1Q5VSL9 837 aa6.95□□□□□ -1.3
CHD6-202ENST00000373222 C8orf74Q6P047 294 aa6.95□□□□□ -1.3
CHD6-202ENST00000373222 CEP63Q96MT8 703 aa6.95□□□□□ -1.3
CHD6-202ENST00000373222 TMEM39BQ9GZU3 492 aa6.95□□□□□ -1.3
CHD6-202ENST00000373222 GBP3Q9H0R5 595 aa6.95□□□□□ -1.3
CHD6-202ENST00000373222 LRRC4CQ9HCJ2 640 aa6.95□□□□□ -1.3
CHD6-202ENST00000373222 EPB41L5Q9HCM4 733 aa6.95□□□□□ -1.3
CHD6-202ENST00000373222 OSGEPQ9NPF4 335 aa6.95□□□□□ -1.3
CHD6-202ENST00000373222 GCNT4Q9P109 453 aa6.95□□□□□ -1.3
CHD6-202ENST00000373222 STIM2Q9P246 746 aa6.95□□□□□ -1.3
CHD6-202ENST00000373222 RABGAP1Q9Y3P9 1069 aa6.95□□□□□ -1.3
CHD6-202ENST00000373222 GOLGA6BA6NDN3 693 aa6.94□□□□□ -1.3
CHD6-202ENST00000373222 IFRD1O00458 451 aaPredicted RBP6.94□□□□□ -1.3
CHD6-202ENST00000373222 KCNK3O14649 394 aa6.94□□□□□ -1.3
CHD6-202ENST00000373222 HEXIM1O94992 359 aaKnown RBP6.94□□□□□ -1.3
CHD6-202ENST00000373222 ITGA4P13612 1032 aa6.94□□□□□ -1.3
CHD6-202ENST00000373222 NR1H3Q13133 447 aa6.94□□□□□ -1.3
CHD6-202ENST00000373222 EXOC3L4Q17RC7 722 aa6.94□□□□□ -1.3
CHD6-202ENST00000373222 Q4G0T1 1027 aa6.94□□□□□ -1.3
CHD6-202ENST00000373222 TTMPQ5BVD1 217 aa6.94□□□□□ -1.3
CHD6-202ENST00000373222 MEI1Q5TIA1 1274 aa6.94□□□□□ -1.3
CHD6-202ENST00000373222 IQCEQ6IPM2 695 aa6.94□□□□□ -1.3
CHD6-202ENST00000373222 ADAT2Q7Z6V5 191 aaKnown RBP6.94□□□□□ -1.3
CHD6-202ENST00000373222 ZC3H3Q8IXZ2 948 aaKnown RBP6.94□□□□□ -1.3
CHD6-202ENST00000373222 SLFN12Q8IYM2 578 aa6.94□□□□□ -1.3
CHD6-202ENST00000373222 MYCT1Q8N699 235 aa6.94□□□□□ -1.3
CHD6-202ENST00000373222 IL31RAQ8NI17 732 aa6.94□□□□□ -1.3
CHD6-202ENST00000373222 INPP4AQ96PE3 977 aaPredicted RBP6.94□□□□□ -1.3
CHD6-202ENST00000373222 SPAG5Q96R06 1193 aa6.94□□□□□ -1.3
CHD6-202ENST00000373222 SRPK1Q96SB4 655 aaKnown RBP6.94□□□□□ -1.3
CHD6-202ENST00000373222 FIZ1Q96SL8 496 aa6.94□□□□□ -1.3
CHD6-202ENST00000373222 INO80BQ9C086 356 aaPredicted RBP6.94□□□□□ -1.3
CHD6-202ENST00000373222 ACP6Q9NPH0 428 aa6.94□□□□□ -1.3
CHD6-202ENST00000373222 TAS2R14Q9NYV8 317 aa6.94□□□□□ -1.3
CHD6-202ENST00000373222 CALCOCO1Q9P1Z2 691 aa6.94□□□□□ -1.3
CHD6-202ENST00000373222 FAM184BQ9ULE4 1060 aa6.94□□□□□ -1.3
CHD6-202ENST00000373222 NR2E1Q9Y466 385 aa6.94□□□□□ -1.3
CHD6-202ENST00000373222 RAD51CO43502 376 aa6.94□□□□□ -1.3
CHD6-202ENST00000373222 AFPP02771 609 aaKnown RBP6.94□□□□□ -1.3
CHD6-202ENST00000373222 TCP1P17987 556 aaKnown RBP6.94□□□□□ -1.3
CHD6-202ENST00000373222 NOP2P46087 812 aaKnown RBP6.94□□□□□ -1.3
CHD6-202ENST00000373222 STAT2P52630 851 aa6.94□□□□□ -1.3
CHD6-202ENST00000373222 DLG4P78352 724 aa6.94□□□□□ -1.3
CHD6-202ENST00000373222 GPS2Q13227 327 aa6.94□□□□□ -1.3
CHD6-202ENST00000373222 AP3B2Q13367 1082 aa6.94□□□□□ -1.3
CHD6-202ENST00000373222 SF3B2Q13435 895 aaKnown RBP6.94□□□□□ -1.3
CHD6-202ENST00000373222 LRCH2Q5VUJ6 765 aa6.94□□□□□ -1.3
CHD6-202ENST00000373222 NAA35Q5VZE5 725 aa6.94□□□□□ -1.3
CHD6-202ENST00000373222 OTOP1Q7RTM1 612 aa6.94□□□□□ -1.3
CHD6-202ENST00000373222 C10orf67Q8IYJ2 551 aa6.94□□□□□ -1.3
CHD6-202ENST00000373222 TTC13Q8NBP0 860 aa6.94□□□□□ -1.3
CHD6-202ENST00000373222 AFAP1L1Q8TED9 768 aa6.94□□□□□ -1.3
CHD6-202ENST00000373222 CASKIN2Q8WXE0 1202 aa6.94□□□□□ -1.3
CHD6-202ENST00000373222 HLA-CQ95604 372 aa6.94□□□□□ -1.3
CHD6-202ENST00000373222 AGBL1Q96MI9 1066 aa6.94□□□□□ -1.3
CHD6-202ENST00000373222 ZIM3Q96PE6 472 aa6.94□□□□□ -1.3
CHD6-202ENST00000373222 HSD17B14Q9BPX1 270 aa6.94□□□□□ -1.3
CHD6-202ENST00000373222 PAGR1Q9BTK6 254 aa6.94□□□□□ -1.3
CHD6-202ENST00000373222 LRRC27Q9C0I9 530 aa6.94□□□□□ -1.3
CHD6-202ENST00000373222 PCIF1Q9H4Z3 704 aa6.94□□□□□ -1.3
CHD6-202ENST00000373222 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.94□□□□□ -1.3
CHD6-202ENST00000373222 VEZTQ9HBM0 779 aa6.94□□□□□ -1.3
CHD6-202ENST00000373222 AIPL1Q9NZN9 384 aa6.94□□□□□ -1.3
CHD6-202ENST00000373222 COL20A1Q9P218 1284 aa6.94□□□□□ -1.3
CHD6-202ENST00000373222 RSPH14Q9UHP6 348 aa6.94□□□□□ -1.3
CHD6-202ENST00000373222 NAGPAQ9UK23 515 aa6.94□□□□□ -1.3
CHD6-202ENST00000373222 ZBTB21Q9ULJ3 1066 aa6.94□□□□□ -1.3
CHD6-202ENST00000373222 TRAF3IP3Q9Y228 551 aa6.94□□□□□ -1.3
CHD6-202ENST00000373222 PCDHGC5Q9Y5F6 944 aa6.94□□□□□ -1.3
CHD6-202ENST00000373222 WDR81Q562E7 1941 aa6.94□□□□□ -1.3
CHD6-202ENST00000373222 PITPNM2Q9BZ72 1349 aa6.94□□□□□ -1.3
CHD6-202ENST00000373222 DDX3XO00571 662 aaKnown RBP eCLIP6.93□□□□□ -1.3
CHD6-202ENST00000373222 PPIP5K2O43314 1243 aa6.93□□□□□ -1.3
CHD6-202ENST00000373222 TBCAO75347 108 aaKnown RBP6.93□□□□□ -1.3
CHD6-202ENST00000373222 ABCB4P21439 1286 aa6.93□□□□□ -1.3
CHD6-202ENST00000373222 FLT3P36888 993 aa6.93□□□□□ -1.3
CHD6-202ENST00000373222 ATP1A2P50993 1020 aa6.93□□□□□ -1.3
CHD6-202ENST00000373222 EDRF1Q3B7T1 1238 aa6.93□□□□□ -1.3
CHD6-202ENST00000373222 AADACL2Q6P093 401 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms