RNA–Protein interactions for RNA: ENST00000373166.7

TRAPPC3-204, Transcript of trafficking protein particle complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC3, Length 1,265 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-204ENST00000373166 NEK8Q86SG6 692 aa21.47■■□□□ 1.03
TRAPPC3-204ENST00000373166 OXER1Q8TDS5 423 aa21.47■■□□□ 1.03
TRAPPC3-204ENST00000373166 SLC5A5Q92911 643 aa21.47■■□□□ 1.03
TRAPPC3-204ENST00000373166 LPPQ93052 612 aa21.47■■□□□ 1.03
TRAPPC3-204ENST00000373166 NAP1L4Q99733 375 aaKnown RBP21.47■■□□□ 1.03
TRAPPC3-204ENST00000373166 FDXACB1Q9BRP7 624 aaPredicted RBP21.47■■□□□ 1.03
TRAPPC3-204ENST00000373166 EMILIN2Q9BXX0 1053 aa21.47■■□□□ 1.03
TRAPPC3-204ENST00000373166 DDX25Q9UHL0 483 aaKnown RBP21.47■■□□□ 1.03
TRAPPC3-204ENST00000373166 PIN4Q9Y237 131 aaKnown RBP21.47■■□□□ 1.03
TRAPPC3-204ENST00000373166 INPP5FQ9Y2H2 1132 aa21.47■■□□□ 1.03
TRAPPC3-204ENST00000373166 PLXNA3P51805 1871 aa21.47■■□□□ 1.03
TRAPPC3-204ENST00000373166 GCFC2P16383 781 aaKnown RBP21.46■■□□□ 1.03
TRAPPC3-204ENST00000373166 AOC1P19801 751 aa21.46■■□□□ 1.03
TRAPPC3-204ENST00000373166 FOSBP53539 338 aa21.46■■□□□ 1.03
TRAPPC3-204ENST00000373166 PTPN14Q15678 1187 aa21.46■■□□□ 1.03
TRAPPC3-204ENST00000373166 MTERF2Q49AM1 385 aa21.46■■□□□ 1.03
TRAPPC3-204ENST00000373166 XKR3Q5GH77 459 aa21.46■■□□□ 1.03
TRAPPC3-204ENST00000373166 CWF19L1Q69YN2 538 aaKnown RBP21.46■■□□□ 1.03
TRAPPC3-204ENST00000373166 ERMP1Q7Z2K6 904 aa21.46■■□□□ 1.03
TRAPPC3-204ENST00000373166 ZNF410Q86VK4 478 aa21.46■■□□□ 1.03
TRAPPC3-204ENST00000373166 ADSSL1Q8N142 457 aa21.46■■□□□ 1.03
TRAPPC3-204ENST00000373166 BCL7CQ8WUZ0 217 aaPredicted RBP21.46■■□□□ 1.03
TRAPPC3-204ENST00000373166 MBOAT7Q96N66 472 aa21.46■■□□□ 1.03
TRAPPC3-204ENST00000373166 LLPHQ9BRT6 129 aaKnown RBP21.46■■□□□ 1.03
TRAPPC3-204ENST00000373166 NIFKQ9BYG3 293 aaKnown RBP21.46■■□□□ 1.03
TRAPPC3-204ENST00000373166 GBP3Q9H0R5 595 aa21.46■■□□□ 1.03
TRAPPC3-204ENST00000373166 UNC45AQ9H3U1 944 aa21.46■■□□□ 1.03
TRAPPC3-204ENST00000373166 FAM105AQ9NUU6 356 aa21.46■■□□□ 1.03
TRAPPC3-204ENST00000373166 SEPT9Q9UHD8 586 aaPredicted RBP21.46■■□□□ 1.03
TRAPPC3-204ENST00000373166 FBXL21Q9UKT6 434 aa21.46■■□□□ 1.03
TRAPPC3-204ENST00000373166 ZNF623O75123 536 aa21.45■■□□□ 1.02
TRAPPC3-204ENST00000373166 OFD1O75665 1012 aa21.45■■□□□ 1.02
TRAPPC3-204ENST00000373166 KLRC2P26717 231 aa21.45■■□□□ 1.02
TRAPPC3-204ENST00000373166 RAB27AP51159 221 aa21.45■■□□□ 1.02
TRAPPC3-204ENST00000373166 RDM1Q8NG50 284 aa21.45■■□□□ 1.02
TRAPPC3-204ENST00000373166 PGBD4Q96DM1 585 aa21.45■■□□□ 1.02
TRAPPC3-204ENST00000373166 RTP3Q9BQQ7 232 aa21.45■■□□□ 1.02
TRAPPC3-204ENST00000373166 SUCLA2Q9P2R7 463 aaPredicted RBP21.45■■□□□ 1.02
TRAPPC3-204ENST00000373166 DNAJB4Q9UDY4 337 aa21.45■■□□□ 1.02
TRAPPC3-204ENST00000373166 IGKV6-21A0A0C4DH24 114 aa21.44■■□□□ 1.02
TRAPPC3-204ENST00000373166 SLC11A1P49279 550 aa21.44■■□□□ 1.02
TRAPPC3-204ENST00000373166 C15orf39Q6ZRI6 1047 aa21.44■■□□□ 1.02
TRAPPC3-204ENST00000373166 CATSPER4Q7RTX7 472 aa21.44■■□□□ 1.02
TRAPPC3-204ENST00000373166 MIER3Q7Z3K6 550 aa21.44■■□□□ 1.02
TRAPPC3-204ENST00000373166 RHPN2Q8IUC4 686 aa21.44■■□□□ 1.02
TRAPPC3-204ENST00000373166 URGCPQ8TCY9 931 aa21.44■■□□□ 1.02
TRAPPC3-204ENST00000373166 KLHL5Q96PQ7 755 aa21.44■■□□□ 1.02
TRAPPC3-204ENST00000373166 KCNK12Q9HB15 430 aa21.44■■□□□ 1.02
TRAPPC3-204ENST00000373166 DUSP12Q9UNI6 340 aa21.44■■□□□ 1.02
TRAPPC3-204ENST00000373166 SPTBN4Q9H254 2564 aa21.44■■□□□ 1.02
TRAPPC3-204ENST00000373166 RIF1Q5UIP0 2472 aaKnown RBP21.44■■□□□ 1.02
TRAPPC3-204ENST00000373166 PI15O43692 258 aa21.43■■□□□ 1.02
TRAPPC3-204ENST00000373166 SLC37A4O43826 429 aa21.43■■□□□ 1.02
TRAPPC3-204ENST00000373166 NPR3P17342 541 aa21.43■■□□□ 1.02
TRAPPC3-204ENST00000373166 ID4P47928 161 aa21.43■■□□□ 1.02
TRAPPC3-204ENST00000373166 CLCN4P51793 760 aa21.43■■□□□ 1.02
TRAPPC3-204ENST00000373166 HMGN5P82970 282 aaKnown RBP21.43■■□□□ 1.02
TRAPPC3-204ENST00000373166 NR5A1Q13285 461 aa21.43■■□□□ 1.02
TRAPPC3-204ENST00000373166 PPP4R3AQ6IN85 833 aa21.43■■□□□ 1.02
TRAPPC3-204ENST00000373166 DIS3L2Q8IYB7 885 aaKnown RBP21.43■■□□□ 1.02
TRAPPC3-204ENST00000373166 CCDC105Q8IYK2 499 aa21.43■■□□□ 1.02
TRAPPC3-204ENST00000373166 ETNPPLQ8TBG4 499 aa21.43■■□□□ 1.02
TRAPPC3-204ENST00000373166 FEZF2Q8TBJ5 459 aa21.43■■□□□ 1.02
TRAPPC3-204ENST00000373166 GJA10Q969M2 543 aa21.43■■□□□ 1.02
TRAPPC3-204ENST00000373166 VN1R3Q9BXE9 311 aa21.43■■□□□ 1.02
TRAPPC3-204ENST00000373166 IGSF9Q9P2J2 1179 aa21.43■■□□□ 1.02
TRAPPC3-204ENST00000373166 MYH9P35579 1960 aaKnown RBP21.43■■□□□ 1.02
TRAPPC3-204ENST00000373166 MEIS3P2A8K0S8 358 aa21.42■■□□□ 1.02
TRAPPC3-204ENST00000373166 CCNT1O60563 726 aaKnown RBP21.42■■□□□ 1.02
TRAPPC3-204ENST00000373166 PSMD10O75832 226 aa21.42■■□□□ 1.02
TRAPPC3-204ENST00000373166 ALDH2P05091 517 aa21.42■■□□□ 1.02
TRAPPC3-204ENST00000373166 CNPP09543 421 aaKnown RBP21.42■■□□□ 1.02
TRAPPC3-204ENST00000373166 ANGPT1Q15389 498 aa21.42■■□□□ 1.02
TRAPPC3-204ENST00000373166 SAFBQ15424 915 aaKnown RBP eCLIP21.42■■□□□ 1.02
TRAPPC3-204ENST00000373166 ZNF280BQ86YH2 543 aa21.42■■□□□ 1.02
TRAPPC3-204ENST00000373166 SIX5Q8N196 739 aa21.42■■□□□ 1.02
TRAPPC3-204ENST00000373166 DTWD2Q8NBA8 298 aa21.42■■□□□ 1.02
TRAPPC3-204ENST00000373166 TNFRSF25Q93038 417 aa21.42■■□□□ 1.02
TRAPPC3-204ENST00000373166 CEP89Q96ST8 783 aa21.42■■□□□ 1.02
TRAPPC3-204ENST00000373166 JPH2Q9BR39 696 aaPredicted RBP21.42■■□□□ 1.02
TRAPPC3-204ENST00000373166 MRPL17Q9NRX2 175 aaKnown RBP21.42■■□□□ 1.02
TRAPPC3-204ENST00000373166 PCDHB2Q9Y5E7 798 aa21.42■■□□□ 1.02
TRAPPC3-204ENST00000373166 MYO10Q9HD67 2058 aa21.41■■□□□ 1.02
TRAPPC3-204ENST00000373166 TMEM150BA6NC51 233 aa21.41■■□□□ 1.02
TRAPPC3-204ENST00000373166 DDX11L8A8MPP1 907 aa21.41■■□□□ 1.02
TRAPPC3-204ENST00000373166 MAFO75444 373 aaPredicted RBP21.41■■□□□ 1.02
TRAPPC3-204ENST00000373166 STBD1O95210 358 aa21.41■■□□□ 1.02
TRAPPC3-204ENST00000373166 SSBP05455 408 aaKnown RBP eCLIP21.41■■□□□ 1.02
TRAPPC3-204ENST00000373166 FAM184AQ8NB25 1140 aa21.41■■□□□ 1.02
TRAPPC3-204ENST00000373166 C8orf76Q96K31 380 aa21.41■■□□□ 1.02
TRAPPC3-204ENST00000373166 NLRP4Q96MN2 994 aa21.41■■□□□ 1.02
TRAPPC3-204ENST00000373166 TBC1D32Q96NH3 1257 aa21.41■■□□□ 1.02
TRAPPC3-204ENST00000373166 FAM193BQ96PV7 902 aaPredicted RBP21.41■■□□□ 1.02
TRAPPC3-204ENST00000373166 SH2D3AQ9BRG2 576 aa21.41■■□□□ 1.02
TRAPPC3-204ENST00000373166 KANSL3Q9P2N6 904 aa21.41■■□□□ 1.02
TRAPPC3-204ENST00000373166 FAN1Q9Y2M0 1017 aa21.41■■□□□ 1.02
TRAPPC3-204ENST00000373166 FAM205CA6NFA0 338 aa21.4■■□□□ 1.02
TRAPPC3-204ENST00000373166 BTBD18B2RXH4 712 aa21.4■■□□□ 1.02
TRAPPC3-204ENST00000373166 STK25O00506 426 aa21.4■■□□□ 1.02
TRAPPC3-204ENST00000373166 MARCH6O60337 910 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms