RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 NME8Q8N427 588 aa9.54□□□□□ -0.88
ATG4A-203ENST00000372232 SRBD1Q8N5C6 995 aaKnown RBP9.54□□□□□ -0.88
ATG4A-203ENST00000372232 ENOX1Q8TC92 643 aaKnown RBP9.54□□□□□ -0.88
ATG4A-203ENST00000372232 NEK9Q8TD19 979 aa9.54□□□□□ -0.88
ATG4A-203ENST00000372232 CARD9Q9H257 536 aa9.54□□□□□ -0.88
ATG4A-203ENST00000372232 SCOCQ9UIL1 159 aa9.54□□□□□ -0.88
ATG4A-203ENST00000372232 CROTQ9UKG9 612 aa9.54□□□□□ -0.88
ATG4A-203ENST00000372232 AGAP1Q9UPQ3 857 aa9.54□□□□□ -0.88
ATG4A-203ENST00000372232 FRMD4BQ9Y2L6 1034 aa9.54□□□□□ -0.88
ATG4A-203ENST00000372232 PCDHA5Q9Y5H7 936 aa9.54□□□□□ -0.88
ATG4A-203ENST00000372232 TMEM247A6NEH6 219 aa9.54□□□□□ -0.88
ATG4A-203ENST00000372232 FAM205CA6NFA0 338 aa9.54□□□□□ -0.88
ATG4A-203ENST00000372232 TRIM75PA6NK02 468 aa9.54□□□□□ -0.88
ATG4A-203ENST00000372232 TSPY2A6NKD2 308 aa9.54□□□□□ -0.88
ATG4A-203ENST00000372232 SMARCA1P28370 1054 aa9.54□□□□□ -0.88
ATG4A-203ENST00000372232 CASP14P31944 242 aa9.54□□□□□ -0.88
ATG4A-203ENST00000372232 MLH1P40692 756 aa9.54□□□□□ -0.88
ATG4A-203ENST00000372232 CD97P48960 835 aa9.54□□□□□ -0.88
ATG4A-203ENST00000372232 ZNF131P52739 623 aa9.54□□□□□ -0.88
ATG4A-203ENST00000372232 C4orf48Q5BLP8 95 aa9.54□□□□□ -0.88
ATG4A-203ENST00000372232 C12orf60Q5U649 245 aa9.54□□□□□ -0.88
ATG4A-203ENST00000372232 ALG1LQ6GMV1 187 aa9.54□□□□□ -0.88
ATG4A-203ENST00000372232 POTEHQ6S545 545 aa9.54□□□□□ -0.88
ATG4A-203ENST00000372232 LRIG3Q6UXM1 1119 aa9.54□□□□□ -0.88
ATG4A-203ENST00000372232 C15orf52Q6ZUT6 534 aaKnown RBP9.54□□□□□ -0.88
ATG4A-203ENST00000372232 MAEAQ7L5Y9 396 aa9.54□□□□□ -0.88
ATG4A-203ENST00000372232 HS2ST1Q7LGA3 356 aa9.54□□□□□ -0.88
ATG4A-203ENST00000372232 UNC93B1Q9H1C4 597 aa9.54□□□□□ -0.88
ATG4A-203ENST00000372232 KANSL2Q9H9L4 492 aa9.54□□□□□ -0.88
ATG4A-203ENST00000372232 NFE2L3Q9Y4A8 694 aa9.54□□□□□ -0.88
ATG4A-203ENST00000372232 AK5Q9Y6K8 562 aa9.54□□□□□ -0.88
ATG4A-203ENST00000372232 CNTNAP5Q8WYK1 1306 aa9.54□□□□□ -0.88
ATG4A-203ENST00000372232 MYH2Q9UKX2 1941 aa9.53□□□□□ -0.88
ATG4A-203ENST00000372232 LY75O60449 1722 aa9.53□□□□□ -0.88
ATG4A-203ENST00000372232 FOXN1O15353 648 aa9.53□□□□□ -0.88
ATG4A-203ENST00000372232 POLR2DO15514 142 aaKnown RBP9.53□□□□□ -0.88
ATG4A-203ENST00000372232 ASAP2O43150 1006 aa9.53□□□□□ -0.88
ATG4A-203ENST00000372232 HIP1RO75146 1068 aa9.53□□□□□ -0.88
ATG4A-203ENST00000372232 TROVE2P10155 538 aaKnown RBP eCLIP9.53□□□□□ -0.88
ATG4A-203ENST00000372232 PEX5P50542 639 aa9.53□□□□□ -0.88
ATG4A-203ENST00000372232 GSTM4Q03013 218 aa9.53□□□□□ -0.88
ATG4A-203ENST00000372232 NPY5RQ15761 445 aa9.53□□□□□ -0.88
ATG4A-203ENST00000372232 CRY2Q49AN0 593 aa9.53□□□□□ -0.88
ATG4A-203ENST00000372232 CYP26C1Q6V0L0 522 aa9.53□□□□□ -0.88
ATG4A-203ENST00000372232 ZNF804AQ7Z570 1209 aa9.53□□□□□ -0.88
ATG4A-203ENST00000372232 STKLD1Q8NE28 680 aa9.53□□□□□ -0.88
ATG4A-203ENST00000372232 SH3RF3Q8TEJ3 882 aaPredicted RBP9.53□□□□□ -0.88
ATG4A-203ENST00000372232 FBF1Q8TES7 1133 aa9.53□□□□□ -0.88
ATG4A-203ENST00000372232 TNFRSF25Q93038 417 aa9.53□□□□□ -0.88
ATG4A-203ENST00000372232 SMC6Q96SB8 1091 aa9.53□□□□□ -0.88
ATG4A-203ENST00000372232 IRF2BPLQ9H1B7 796 aa9.53□□□□□ -0.88
ATG4A-203ENST00000372232 ARHGEF3Q9NR81 526 aa9.53□□□□□ -0.88
ATG4A-203ENST00000372232 ITIH6Q6UXX5 1313 aa9.53□□□□□ -0.88
ATG4A-203ENST00000372232 EIF3FO00303 357 aaPredicted RBP9.53□□□□□ -0.88
ATG4A-203ENST00000372232 IGF2BP3O00425 579 aaKnown RBP eCLIP9.53□□□□□ -0.88
ATG4A-203ENST00000372232 RARAP10276 462 aa9.53□□□□□ -0.88
ATG4A-203ENST00000372232 BMP6P22004 513 aa9.53□□□□□ -0.88
ATG4A-203ENST00000372232 GBP1P32455 592 aa9.53□□□□□ -0.88
ATG4A-203ENST00000372232 HPDP32754 393 aaPredicted RBP9.53□□□□□ -0.88
ATG4A-203ENST00000372232 MSH2P43246 934 aa9.53□□□□□ -0.88
ATG4A-203ENST00000372232 NT5C2P49902 561 aa9.53□□□□□ -0.88
ATG4A-203ENST00000372232 VAV2P52735 878 aa9.53□□□□□ -0.88
ATG4A-203ENST00000372232 PPP4CP60510 307 aa9.53□□□□□ -0.88
ATG4A-203ENST00000372232 GSTO1P78417 241 aa9.53□□□□□ -0.88
ATG4A-203ENST00000372232 GPSM2P81274 684 aa9.53□□□□□ -0.88
ATG4A-203ENST00000372232 MCL1Q07820 350 aa9.53□□□□□ -0.88
ATG4A-203ENST00000372232 CBLBQ13191 982 aa9.53□□□□□ -0.88
ATG4A-203ENST00000372232 BIRC3Q13489 604 aa9.53□□□□□ -0.88
ATG4A-203ENST00000372232 SERINC3Q13530 473 aa9.53□□□□□ -0.88
ATG4A-203ENST00000372232 GRIK5Q16478 980 aa9.53□□□□□ -0.88
ATG4A-203ENST00000372232 NT5DC1Q5TFE4 455 aa9.53□□□□□ -0.88
ATG4A-203ENST00000372232 APTXQ7Z2E3 356 aaKnown RBP9.53□□□□□ -0.88
ATG4A-203ENST00000372232 TRPM8Q7Z2W7 1104 aa9.53□□□□□ -0.88
ATG4A-203ENST00000372232 CTNNBL1Q8WYA6 563 aaPredicted RBP9.53□□□□□ -0.88
ATG4A-203ENST00000372232 RPGRQ92834 1020 aaKnown RBP9.53□□□□□ -0.88
ATG4A-203ENST00000372232 BHMTQ93088 406 aa9.53□□□□□ -0.88
ATG4A-203ENST00000372232 CHMP6Q96FZ7 201 aa9.53□□□□□ -0.88
ATG4A-203ENST00000372232 CSRNP2Q9H175 543 aa9.53□□□□□ -0.88
ATG4A-203ENST00000372232 INIPQ9NRY2 104 aa9.53□□□□□ -0.88
ATG4A-203ENST00000372232 GUCA1BQ9UMX6 200 aa9.53□□□□□ -0.88
ATG4A-203ENST00000372232 EFR3BQ9Y2G0 817 aa9.53□□□□□ -0.88
ATG4A-203ENST00000372232 REXO2Q9Y3B8 237 aaKnown RBP9.53□□□□□ -0.88
ATG4A-203ENST00000372232 TAF1LQ8IZX4 1826 aa9.52□□□□□ -0.88
ATG4A-203ENST00000372232 CCDC194A0A1B0GVG4 234 aa9.52□□□□□ -0.89
ATG4A-203ENST00000372232 A8MUI8 341 aa9.52□□□□□ -0.89
ATG4A-203ENST00000372232 PHF20L1A8MW92 1017 aa9.52□□□□□ -0.89
ATG4A-203ENST00000372232 HNRNPRO43390 633 aaKnown RBP9.52□□□□□ -0.89
ATG4A-203ENST00000372232 SUPT3HO75486 399 aa9.52□□□□□ -0.89
ATG4A-203ENST00000372232 KRT16P08779 473 aa9.52□□□□□ -0.89
ATG4A-203ENST00000372232 GYS1P13807 737 aa9.52□□□□□ -0.89
ATG4A-203ENST00000372232 VARSP26640 1264 aaKnown RBP9.52□□□□□ -0.89
ATG4A-203ENST00000372232 CA8P35219 290 aa9.52□□□□□ -0.89
ATG4A-203ENST00000372232 SARSP49591 514 aaKnown RBP9.52□□□□□ -0.89
ATG4A-203ENST00000372232 RHBDL3P58872 404 aa9.52□□□□□ -0.89
ATG4A-203ENST00000372232 PPP2R2AP63151 447 aa9.52□□□□□ -0.89
ATG4A-203ENST00000372232 TFAP4Q01664 338 aa9.52□□□□□ -0.89
ATG4A-203ENST00000372232 CNPY1Q3B7I2 92 aa9.52□□□□□ -0.89
ATG4A-203ENST00000372232 HAUS3Q68CZ6 603 aa9.52□□□□□ -0.89
ATG4A-203ENST00000372232 USP49Q70CQ1 688 aa9.52□□□□□ -0.89
ATG4A-203ENST00000372232 PIGWQ7Z7B1 504 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms