RNA–Protein interactions for RNA: ENST00000372216.8

COL4A6-202, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-202ENST00000372216 VCX3AQ9NNX9 186 aa10.45□□□□□ -0.74
COL4A6-202ENST00000372216 KLHL14Q9P2G3 628 aa10.45□□□□□ -0.74
COL4A6-202ENST00000372216 STAT5BP51692 787 aa10.45□□□□□ -0.74
COL4A6-202ENST00000372216 PTK2BQ14289 1009 aa10.45□□□□□ -0.74
COL4A6-202ENST00000372216 THEMIS2Q5TEJ8 643 aa10.45□□□□□ -0.74
COL4A6-202ENST00000372216 GPD1LQ8N335 351 aa10.45□□□□□ -0.74
COL4A6-202ENST00000372216 CCHCR1Q8TD31 782 aa10.45□□□□□ -0.74
COL4A6-202ENST00000372216 FAM151AQ8WW52 585 aa10.45□□□□□ -0.74
COL4A6-202ENST00000372216 EPB41L5Q9HCM4 733 aa10.45□□□□□ -0.74
COL4A6-202ENST00000372216 ADAM22Q9P0K1 906 aa10.45□□□□□ -0.74
COL4A6-202ENST00000372216 HPCAL4Q9UM19 191 aa10.45□□□□□ -0.74
COL4A6-202ENST00000372216 NPHP3-ACAD11A0A0J9YXS1 232 aa10.45□□□□□ -0.74
COL4A6-202ENST00000372216 GOLGA8MH3BSY2 632 aa10.45□□□□□ -0.74
COL4A6-202ENST00000372216 SART1O43290 800 aaKnown RBP10.45□□□□□ -0.74
COL4A6-202ENST00000372216 ANP32DO95626 131 aa10.45□□□□□ -0.74
COL4A6-202ENST00000372216 KITP10721 976 aa10.45□□□□□ -0.74
COL4A6-202ENST00000372216 RPS12P25398 132 aaKnown RBP10.45□□□□□ -0.74
COL4A6-202ENST00000372216 PRCPP42785 496 aa10.45□□□□□ -0.74
COL4A6-202ENST00000372216 PROM2Q8N271 834 aa10.45□□□□□ -0.74
COL4A6-202ENST00000372216 MAGEB10Q96LZ2 347 aaPredicted RBP10.45□□□□□ -0.74
COL4A6-202ENST00000372216 SPZ1Q9BXG8 430 aa10.45□□□□□ -0.74
COL4A6-202ENST00000372216 INTS2Q9H0H0 1204 aaKnown RBP10.45□□□□□ -0.74
COL4A6-202ENST00000372216 CEP72Q9P209 647 aa10.45□□□□□ -0.74
COL4A6-202ENST00000372216 CDC23Q9UJX2 597 aa10.45□□□□□ -0.74
COL4A6-202ENST00000372216 PIN4Q9Y237 131 aaKnown RBP10.45□□□□□ -0.74
COL4A6-202ENST00000372216 ADAMTS13Q76LX8 1427 aa10.45□□□□□ -0.74
COL4A6-202ENST00000372216 DYNC1LI2O43237 492 aaPredicted RBP10.45□□□□□ -0.74
COL4A6-202ENST00000372216 NDUFB10O96000 172 aa10.45□□□□□ -0.74
COL4A6-202ENST00000372216 CETPP11597 493 aa10.45□□□□□ -0.74
COL4A6-202ENST00000372216 HUNKP57058 714 aa10.45□□□□□ -0.74
COL4A6-202ENST00000372216 EPHA7Q15375 998 aa10.45□□□□□ -0.74
COL4A6-202ENST00000372216 C16orf86Q6ZW13 317 aa10.45□□□□□ -0.74
COL4A6-202ENST00000372216 TAS2R42Q7RTR8 314 aa10.45□□□□□ -0.74
COL4A6-202ENST00000372216 RNF135Q8IUD6 432 aa10.45□□□□□ -0.74
COL4A6-202ENST00000372216 NDUFAF2Q8N183 169 aa10.45□□□□□ -0.74
COL4A6-202ENST00000372216 TEX13BQ9BXU2 312 aa10.45□□□□□ -0.74
COL4A6-202ENST00000372216 DYRK4Q9NR20 520 aa10.45□□□□□ -0.74
COL4A6-202ENST00000372216 AGLP35573 1532 aa10.45□□□□□ -0.74
COL4A6-202ENST00000372216 NDUFA10O95299 355 aa10.45□□□□□ -0.74
COL4A6-202ENST00000372216 GUCY1A2P33402 732 aa10.45□□□□□ -0.74
COL4A6-202ENST00000372216 ZNF543Q08ER8 600 aa10.45□□□□□ -0.74
COL4A6-202ENST00000372216 DNAJC7Q99615 494 aa10.45□□□□□ -0.74
COL4A6-202ENST00000372216 SMAD5Q99717 465 aaKnown RBP10.45□□□□□ -0.74
COL4A6-202ENST00000372216 TLK1Q9UKI8 766 aa10.45□□□□□ -0.74
COL4A6-202ENST00000372216 CCDC195A0A1B0GUA6 201 aa10.44□□□□□ -0.74
COL4A6-202ENST00000372216 CC2D1AQ6P1N0 951 aaPredicted RBP10.44□□□□□ -0.74
COL4A6-202ENST00000372216 AP1M1Q9BXS5 423 aa10.44□□□□□ -0.74
COL4A6-202ENST00000372216 ASNSD1Q9NWL6 643 aa10.44□□□□□ -0.74
COL4A6-202ENST00000372216 PREX1Q8TCU6 1659 aa10.44□□□□□ -0.74
COL4A6-202ENST00000372216 PVALEFA0A1B0GWK0 134 aa10.44□□□□□ -0.74
COL4A6-202ENST00000372216 TMEM62Q0P6H9 643 aa10.44□□□□□ -0.74
COL4A6-202ENST00000372216 SREBF2Q12772 1141 aa10.44□□□□□ -0.74
COL4A6-202ENST00000372216 SBK1Q52WX2 424 aa10.44□□□□□ -0.74
COL4A6-202ENST00000372216 GBP5Q96PP8 586 aa10.44□□□□□ -0.74
COL4A6-202ENST00000372216 PANX2Q96RD6 677 aa10.44□□□□□ -0.74
COL4A6-202ENST00000372216 KATNAL1Q9BW62 490 aa10.44□□□□□ -0.74
COL4A6-202ENST00000372216 TUFT1Q9NNX1 390 aa10.44□□□□□ -0.74
COL4A6-202ENST00000372216 NDFIP2Q9NV92 336 aa10.44□□□□□ -0.74
COL4A6-202ENST00000372216 KIF28PB7ZC32 967 aa10.44□□□□□ -0.74
COL4A6-202ENST00000372216 DNAJC6O75061 913 aa10.44□□□□□ -0.74
COL4A6-202ENST00000372216 GH1P01241 217 aa10.44□□□□□ -0.74
COL4A6-202ENST00000372216 TBXAS1P24557 533 aaPredicted RBP10.44□□□□□ -0.74
COL4A6-202ENST00000372216 IMPG1Q17R60 797 aa10.44□□□□□ -0.74
COL4A6-202ENST00000372216 BZW1Q7L1Q6 419 aaKnown RBP10.44□□□□□ -0.74
COL4A6-202ENST00000372216 RNF149Q8NC42 400 aa10.44□□□□□ -0.74
COL4A6-202ENST00000372216 PPHLN1Q8NEY8 458 aaKnown RBP10.44□□□□□ -0.74
COL4A6-202ENST00000372216 FSD1LQ9BXM9 530 aa10.44□□□□□ -0.74
COL4A6-202ENST00000372216 RBAKQ9NYW8 714 aaPredicted RBP10.44□□□□□ -0.74
COL4A6-202ENST00000372216 DFFAO00273 331 aa10.44□□□□□ -0.74
COL4A6-202ENST00000372216 SRGAP2O75044 1071 aa10.44□□□□□ -0.74
COL4A6-202ENST00000372216 PRKCBP05771 671 aa10.44□□□□□ -0.74
COL4A6-202ENST00000372216 PLS3P13797 630 aa10.44□□□□□ -0.74
COL4A6-202ENST00000372216 RWDD2BP57060 319 aa10.44□□□□□ -0.74
COL4A6-202ENST00000372216 DEFB132Q7Z7B7 95 aa10.44□□□□□ -0.74
COL4A6-202ENST00000372216 TMEM35BQ8NCS4 154 aa10.44□□□□□ -0.74
COL4A6-202ENST00000372216 PIP4K2CQ8TBX8 421 aa10.44□□□□□ -0.74
COL4A6-202ENST00000372216 GTF3C2Q8WUA4 911 aaPredicted RBP10.44□□□□□ -0.74
COL4A6-202ENST00000372216 MAP3K20Q9NYL2 800 aaKnown RBP10.44□□□□□ -0.74
COL4A6-202ENST00000372216 SNX2O60749 519 aa10.44□□□□□ -0.74
COL4A6-202ENST00000372216 GGPS1O95749 300 aa10.44□□□□□ -0.74
COL4A6-202ENST00000372216 CENPAP49450 140 aa10.44□□□□□ -0.74
COL4A6-202ENST00000372216 KYAT1Q16773 422 aa10.44□□□□□ -0.74
COL4A6-202ENST00000372216 SYCP2LQ5T4T6 812 aa10.44□□□□□ -0.74
COL4A6-202ENST00000372216 INTS5Q6P9B9 1019 aaKnown RBP10.44□□□□□ -0.74
COL4A6-202ENST00000372216 TOGARAM2Q6ZUX3 1019 aa10.44□□□□□ -0.74
COL4A6-202ENST00000372216 COL23A1Q86Y22 540 aaPredicted RBP10.44□□□□□ -0.74
COL4A6-202ENST00000372216 RFWD2Q8NHY2 731 aa10.44□□□□□ -0.74
COL4A6-202ENST00000372216 PPP1R36Q96LQ0 422 aa10.44□□□□□ -0.74
COL4A6-202ENST00000372216 NYAP2Q9P242 653 aa10.44□□□□□ -0.74
COL4A6-202ENST00000372216 SEL1LQ9UBV2 794 aa10.44□□□□□ -0.74
COL4A6-202ENST00000372216 CNOT8Q9UFF9 292 aaKnown RBP10.44□□□□□ -0.74
COL4A6-202ENST00000372216 BCAP29Q9UHQ4 241 aa10.44□□□□□ -0.74
COL4A6-202ENST00000372216 C6orf222P0C671 652 aaPredicted RBP10.43□□□□□ -0.74
COL4A6-202ENST00000372216 HLA-DPA1P20036 260 aa10.43□□□□□ -0.74
COL4A6-202ENST00000372216 KCNJ6P48051 423 aa10.43□□□□□ -0.74
COL4A6-202ENST00000372216 KCNH2Q12809 1159 aa10.43□□□□□ -0.74
COL4A6-202ENST00000372216 CEP55Q53EZ4 464 aa10.43□□□□□ -0.74
COL4A6-202ENST00000372216 ALKBH5Q6P6C2 394 aaKnown RBP10.43□□□□□ -0.74
COL4A6-202ENST00000372216 PCGF5Q86SE9 256 aa10.43□□□□□ -0.74
COL4A6-202ENST00000372216 SGMS1Q86VZ5 419 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms