RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 TMCO3Q6UWJ1 677 aa15.37■□□□□ 0.05
LDB3-204ENST00000372066 TRAPPC11Q7Z392 1133 aa15.37■□□□□ 0.05
LDB3-204ENST00000372066 MIER3Q7Z3K6 550 aa15.37■□□□□ 0.05
LDB3-204ENST00000372066 TRIM58Q8NG06 486 aa15.37■□□□□ 0.05
LDB3-204ENST00000372066 SECISBP2LQ93073 1101 aaKnown RBP15.37■□□□□ 0.05
LDB3-204ENST00000372066 IFIH1Q9BYX4 1025 aaKnown RBP15.37■□□□□ 0.05
LDB3-204ENST00000372066 UPF3AQ9H1J1 476 aaKnown RBP15.37■□□□□ 0.05
LDB3-204ENST00000372066 ZSWIM4Q9H7M6 989 aa15.37■□□□□ 0.05
LDB3-204ENST00000372066 ACAD9Q9H845 621 aa15.37■□□□□ 0.05
LDB3-204ENST00000372066 DBR1Q9UK59 544 aaKnown RBP15.37■□□□□ 0.05
LDB3-204ENST00000372066 ATP8B3O60423 1300 aa15.37■□□□□ 0.05
LDB3-204ENST00000372066 MROH7Q68CQ1 1323 aa15.37■□□□□ 0.05
LDB3-204ENST00000372066 ZNFX1Q9P2E3 1918 aaKnown RBP15.37■□□□□ 0.05
LDB3-204ENST00000372066 CUL9Q8IWT3 2517 aa15.37■□□□□ 0.05
LDB3-204ENST00000372066 CTAGE15A4D2H0 777 aa15.36■□□□□ 0.05
LDB3-204ENST00000372066 RSPH10B2B2RC85 870 aa15.36■□□□□ 0.05
LDB3-204ENST00000372066 ARVCFO00192 962 aa15.36■□□□□ 0.05
LDB3-204ENST00000372066 NFIBO00712 420 aa15.36■□□□□ 0.05
LDB3-204ENST00000372066 TACC1O75410 805 aa15.36■□□□□ 0.05
LDB3-204ENST00000372066 PRPF6O94906 941 aaKnown RBP15.36■□□□□ 0.05
LDB3-204ENST00000372066 P4HBP07237 508 aaKnown RBP15.36■□□□□ 0.05
LDB3-204ENST00000372066 RSPH10BP0C881 870 aa15.36■□□□□ 0.05
LDB3-204ENST00000372066 CTAGE8P0CG41 777 aa15.36■□□□□ 0.05
LDB3-204ENST00000372066 ALAS1P13196 640 aa15.36■□□□□ 0.05
LDB3-204ENST00000372066 FOSL2P15408 326 aa15.36■□□□□ 0.05
LDB3-204ENST00000372066 ITGB5P18084 799 aa15.36■□□□□ 0.05
LDB3-204ENST00000372066 EIF4A3P38919 411 aaKnown RBP15.36■□□□□ 0.05
LDB3-204ENST00000372066 CLCN6P51797 869 aa15.36■□□□□ 0.05
LDB3-204ENST00000372066 TKFCQ3LXA3 575 aa15.36■□□□□ 0.05
LDB3-204ENST00000372066 CTAGE6Q86UF2 777 aa15.36■□□□□ 0.05
LDB3-204ENST00000372066 CTAGE4Q8IX94 777 aa15.36■□□□□ 0.05
LDB3-204ENST00000372066 MYCT1Q8N699 235 aa15.36■□□□□ 0.05
LDB3-204ENST00000372066 SYTL5Q8TDW5 730 aaPredicted RBP15.36■□□□□ 0.05
LDB3-204ENST00000372066 LXNQ9BS40 222 aa15.36■□□□□ 0.05
LDB3-204ENST00000372066 AGO4Q9HCK5 861 aaKnown RBP15.36■□□□□ 0.05
LDB3-204ENST00000372066 RNF146Q9NTX7 359 aa15.36■□□□□ 0.05
LDB3-204ENST00000372066 AIPL1Q9NZN9 384 aa15.36■□□□□ 0.05
LDB3-204ENST00000372066 TCEAL9Q9UHQ7 104 aa15.36■□□□□ 0.05
LDB3-204ENST00000372066 TBX21Q9UL17 535 aa15.36■□□□□ 0.05
LDB3-204ENST00000372066 PCDHB13Q9Y5F0 798 aa15.36■□□□□ 0.05
LDB3-204ENST00000372066 LTBP2Q14767 1821 aa15.36■□□□□ 0.05
LDB3-204ENST00000372066 TMEM265A0A087WTH1 108 aa15.36■□□□□ 0.05
LDB3-204ENST00000372066 A0A0U1RQG5 324 aaPredicted RBP15.36■□□□□ 0.05
LDB3-204ENST00000372066 NOL4O94818 638 aa15.36■□□□□ 0.05
LDB3-204ENST00000372066 HOXD13P35453 343 aa15.36■□□□□ 0.05
LDB3-204ENST00000372066 TNFAIP2Q03169 654 aa15.36■□□□□ 0.05
LDB3-204ENST00000372066 BRD3Q15059 726 aa15.36■□□□□ 0.05
LDB3-204ENST00000372066 ASTE1Q2TB18 679 aaPredicted RBP15.36■□□□□ 0.05
LDB3-204ENST00000372066 MFSD5Q6N075 450 aa15.36■□□□□ 0.05
LDB3-204ENST00000372066 HS2ST1Q7LGA3 356 aa15.36■□□□□ 0.05
LDB3-204ENST00000372066 FMNL3Q8IVF7 1028 aa15.36■□□□□ 0.05
LDB3-204ENST00000372066 FAM178BQ8IXR5 827 aa15.36■□□□□ 0.05
LDB3-204ENST00000372066 FAM133AQ8N9E0 248 aa15.36■□□□□ 0.05
LDB3-204ENST00000372066 RDM1Q8NG50 284 aa15.36■□□□□ 0.05
LDB3-204ENST00000372066 PIGOQ8TEQ8 1089 aa15.36■□□□□ 0.05
LDB3-204ENST00000372066 TRERF1Q96PN7 1200 aa15.36■□□□□ 0.05
LDB3-204ENST00000372066 ALS2CR12Q96Q35 445 aa15.36■□□□□ 0.05
LDB3-204ENST00000372066 GANQ9H2C0 597 aa15.36■□□□□ 0.05
LDB3-204ENST00000372066 A1CFQ9NQ94 594 aaKnown RBP15.36■□□□□ 0.05
LDB3-204ENST00000372066 KCNH7Q9NS40 1196 aa15.36■□□□□ 0.05
LDB3-204ENST00000372066 COL20A1Q9P218 1284 aa15.36■□□□□ 0.05
LDB3-204ENST00000372066 PCDHA13Q9Y5I0 950 aa15.36■□□□□ 0.05
LDB3-204ENST00000372066 BZW2Q9Y6E2 419 aaKnown RBP15.36■□□□□ 0.05
LDB3-204ENST00000372066 ARID2Q68CP9 1835 aa15.35■□□□□ 0.05
LDB3-204ENST00000372066 KIAA1217Q5T5P2 1943 aa15.35■□□□□ 0.05
LDB3-204ENST00000372066 ZMYM2Q9UBW7 1377 aa15.35■□□□□ 0.05
LDB3-204ENST00000372066 SOWAHBA6NEL2 793 aa15.35■□□□□ 0.05
LDB3-204ENST00000372066 ASB14A6NK59 587 aa15.35■□□□□ 0.05
LDB3-204ENST00000372066 TLR3O15455 904 aaKnown RBP15.35■□□□□ 0.05
LDB3-204ENST00000372066 ABL1P00519 1130 aa15.35■□□□□ 0.05
LDB3-204ENST00000372066 SFNP31947 248 aa15.35■□□□□ 0.05
LDB3-204ENST00000372066 PSMC2P35998 433 aaKnown RBP15.35■□□□□ 0.05
LDB3-204ENST00000372066 JAK3P52333 1124 aa15.35■□□□□ 0.05
LDB3-204ENST00000372066 BEX3Q00994 111 aa15.35■□□□□ 0.05
LDB3-204ENST00000372066 PPIGQ13427 754 aaKnown RBP eCLIP15.35■□□□□ 0.05
LDB3-204ENST00000372066 MTMR1Q13613 665 aa15.35■□□□□ 0.05
LDB3-204ENST00000372066 SLC9A9Q8IVB4 645 aa15.35■□□□□ 0.05
LDB3-204ENST00000372066 RNF10Q8N5U6 811 aaKnown RBP15.35■□□□□ 0.05
LDB3-204ENST00000372066 MSANTD4Q8NCY6 345 aa15.35■□□□□ 0.05
LDB3-204ENST00000372066 TMEM174Q8WUU8 243 aa15.35■□□□□ 0.05
LDB3-204ENST00000372066 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.35■□□□□ 0.05
LDB3-204ENST00000372066 KATNBL1Q9H079 304 aa15.35■□□□□ 0.05
LDB3-204ENST00000372066 SAR1BQ9Y6B6 198 aa15.35■□□□□ 0.05
LDB3-204ENST00000372066 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.34■□□□□ 0.05
LDB3-204ENST00000372066 CCDC151A5D8V7 595 aa15.34■□□□□ 0.05
LDB3-204ENST00000372066 DNAJB2P25686 324 aa15.34■□□□□ 0.05
LDB3-204ENST00000372066 POLR2FP61218 127 aaKnown RBP15.34■□□□□ 0.05
LDB3-204ENST00000372066 KRT76Q01546 638 aa15.34■□□□□ 0.05
LDB3-204ENST00000372066 GRIN2CQ14957 1233 aa15.34■□□□□ 0.05
LDB3-204ENST00000372066 PGM5Q15124 567 aa15.34■□□□□ 0.05
LDB3-204ENST00000372066 TDRD12Q587J7 1177 aaKnown RBP15.34■□□□□ 0.05
LDB3-204ENST00000372066 C10orf76Q5T2E6 689 aa15.34■□□□□ 0.05
LDB3-204ENST00000372066 HGSNATQ68CP4 663 aa15.34■□□□□ 0.05
LDB3-204ENST00000372066 IQCEQ6IPM2 695 aa15.34■□□□□ 0.05
LDB3-204ENST00000372066 GBP6Q6ZN66 633 aa15.34■□□□□ 0.05
LDB3-204ENST00000372066 ZNF720Q7Z2F6 126 aa15.34■□□□□ 0.05
LDB3-204ENST00000372066 KRT222Q8N1A0 295 aa15.34■□□□□ 0.05
LDB3-204ENST00000372066 TMEM199Q8N511 208 aa15.34■□□□□ 0.05
LDB3-204ENST00000372066 CCDC155Q8N6L0 562 aa15.34■□□□□ 0.05
LDB3-204ENST00000372066 PPP1R12CQ9BZL4 782 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms