RNA–Protein interactions for RNA: ENST00000371621.4

PTPN1-201, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN1, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-201ENST00000371621 MDM2Q00987 491 aaPredicted RBP12.55□□□□□ -0.4
PTPN1-201ENST00000371621 C6orf183Q5T699 404 aa12.55□□□□□ -0.4
PTPN1-201ENST00000371621 CCDC89Q8N998 374 aa12.55□□□□□ -0.4
PTPN1-201ENST00000371621 CAAP1Q9H8G2 361 aa12.55□□□□□ -0.4
PTPN1-201ENST00000371621 KIAA1024Q9UPX6 916 aa12.55□□□□□ -0.4
PTPN1-201ENST00000371621 QRICH2Q9H0J4 1663 aa12.55□□□□□ -0.4
PTPN1-201ENST00000371621 CDH16O75309 829 aa12.54□□□□□ -0.4
PTPN1-201ENST00000371621 LTKP29376 864 aa12.54□□□□□ -0.4
PTPN1-201ENST00000371621 SERPINB8P50452 374 aa12.54□□□□□ -0.4
PTPN1-201ENST00000371621 CYP4A11Q02928 519 aa12.54□□□□□ -0.4
PTPN1-201ENST00000371621 CASC4Q6P4E1 433 aa12.54□□□□□ -0.4
PTPN1-201ENST00000371621 FAM81BQ96LP2 452 aa12.54□□□□□ -0.4
PTPN1-201ENST00000371621 KLHL25Q9H0H3 589 aa12.54□□□□□ -0.4
PTPN1-201ENST00000371621 GINM1Q9NU53 330 aa12.54□□□□□ -0.4
PTPN1-201ENST00000371621 TRPC5Q9UL62 973 aaPredicted RBP12.54□□□□□ -0.4
PTPN1-201ENST00000371621 CAMSAP1Q5T5Y3 1602 aa12.54□□□□□ -0.4
PTPN1-201ENST00000371621 GALCP54803 685 aa12.54□□□□□ -0.4
PTPN1-201ENST00000371621 TFAP4Q01664 338 aa12.54□□□□□ -0.4
PTPN1-201ENST00000371621 MECOMQ03112 1051 aa12.54□□□□□ -0.4
PTPN1-201ENST00000371621 DAB2IPQ5VWQ8 1189 aa12.54□□□□□ -0.4
PTPN1-201ENST00000371621 SPATA5Q8NB90 893 aa12.54□□□□□ -0.4
PTPN1-201ENST00000371621 NSL1Q96IY1 281 aa12.54□□□□□ -0.4
PTPN1-201ENST00000371621 RMDN2Q96LZ7 410 aa12.54□□□□□ -0.4
PTPN1-201ENST00000371621 TRAPPC9Q96Q05 1148 aa12.54□□□□□ -0.4
PTPN1-201ENST00000371621 CCT7Q99832 543 aa12.54□□□□□ -0.4
PTPN1-201ENST00000371621 WARS2Q9UGM6 360 aaKnown RBP12.54□□□□□ -0.4
PTPN1-201ENST00000371621 ABCC12Q96J65 1359 aa12.54□□□□□ -0.4
PTPN1-201ENST00000371621 TJP3O95049 919 aa12.54□□□□□ -0.4
PTPN1-201ENST00000371621 DCTN2Q13561 401 aaKnown RBP12.54□□□□□ -0.4
PTPN1-201ENST00000371621 MTMR2Q13614 643 aa12.54□□□□□ -0.4
PTPN1-201ENST00000371621 HIC1Q14526 733 aa12.54□□□□□ -0.4
PTPN1-201ENST00000371621 KRT81Q14533 505 aa12.54□□□□□ -0.4
PTPN1-201ENST00000371621 C11orf91Q3C1V1 193 aa12.54□□□□□ -0.4
PTPN1-201ENST00000371621 C6orf89Q6UWU4 347 aa12.54□□□□□ -0.4
PTPN1-201ENST00000371621 MYCT1Q8N699 235 aa12.54□□□□□ -0.4
PTPN1-201ENST00000371621 MED15Q96RN5 788 aa12.54□□□□□ -0.4
PTPN1-201ENST00000371621 SLC13A1Q9BZW2 595 aa12.54□□□□□ -0.4
PTPN1-201ENST00000371621 ARHGAP26Q9UNA1 814 aa12.54□□□□□ -0.4
PTPN1-201ENST00000371621 ZNF232Q9UNY5 417 aa12.54□□□□□ -0.4
PTPN1-201ENST00000371621 ATP7BP35670 1465 aa12.54□□□□□ -0.4
PTPN1-201ENST00000371621 TRIM43BA6NCK2 446 aa12.53□□□□□ -0.4
PTPN1-201ENST00000371621 EPHB6O15197 1021 aa12.53□□□□□ -0.4
PTPN1-201ENST00000371621 WDR46O15213 610 aaKnown RBP12.53□□□□□ -0.4
PTPN1-201ENST00000371621 GNA14O95837 355 aa12.53□□□□□ -0.4
PTPN1-201ENST00000371621 GH1P01241 217 aa12.53□□□□□ -0.4
PTPN1-201ENST00000371621 AFPP02771 609 aaKnown RBP12.53□□□□□ -0.4
PTPN1-201ENST00000371621 MCF2P10911 925 aa12.53□□□□□ -0.4
PTPN1-201ENST00000371621 BCRP11274 1271 aa12.53□□□□□ -0.4
PTPN1-201ENST00000371621 VAV1P15498 845 aa12.53□□□□□ -0.4
PTPN1-201ENST00000371621 SLC9A1P19634 815 aa12.53□□□□□ -0.4
PTPN1-201ENST00000371621 PTPN4P29074 926 aa12.53□□□□□ -0.4
PTPN1-201ENST00000371621 DYNLT1P63172 113 aa12.53□□□□□ -0.4
PTPN1-201ENST00000371621 KRT17Q04695 432 aa12.53□□□□□ -0.4
PTPN1-201ENST00000371621 LVRNQ6Q4G3 990 aa12.53□□□□□ -0.4
PTPN1-201ENST00000371621 DPH6Q7L8W6 267 aa12.53□□□□□ -0.4
PTPN1-201ENST00000371621 CD302Q8IX05 232 aa12.53□□□□□ -0.4
PTPN1-201ENST00000371621 REXO1Q8N1G1 1221 aaKnown RBP12.53□□□□□ -0.4
PTPN1-201ENST00000371621 GPCPD1Q9NPB8 672 aa12.53□□□□□ -0.4
PTPN1-201ENST00000371621 LNPEPQ9UIQ6 1025 aa12.53□□□□□ -0.4
PTPN1-201ENST00000371621 TULP4Q9NRJ4 1543 aa12.53□□□□□ -0.4
PTPN1-201ENST00000371621 SSU72P8A0A1W2PR75 194 aa12.53□□□□□ -0.4
PTPN1-201ENST00000371621 POTEMA6NI47 508 aa12.53□□□□□ -0.4
PTPN1-201ENST00000371621 NPTXRO95502 500 aa12.53□□□□□ -0.4
PTPN1-201ENST00000371621 LMNB1P20700 586 aa12.53□□□□□ -0.4
PTPN1-201ENST00000371621 TRMT10CQ7L0Y3 403 aaKnown RBP12.53□□□□□ -0.4
PTPN1-201ENST00000371621 HEATR4Q86WZ0 1026 aa12.53□□□□□ -0.4
PTPN1-201ENST00000371621 OGFOD1Q8N543 542 aa12.53□□□□□ -0.4
PTPN1-201ENST00000371621 AGR3Q8TD06 166 aa12.53□□□□□ -0.4
PTPN1-201ENST00000371621 LENG1Q96BZ8 264 aaPredicted RBP12.53□□□□□ -0.4
PTPN1-201ENST00000371621 NEUROG2Q9H2A3 272 aa12.53□□□□□ -0.4
PTPN1-201ENST00000371621 SH3GLB1Q9Y371 365 aa12.53□□□□□ -0.4
PTPN1-201ENST00000371621 RSPH10B2B2RC85 870 aa12.53□□□□□ -0.4
PTPN1-201ENST00000371621 SGK1O00141 431 aa12.53□□□□□ -0.4
PTPN1-201ENST00000371621 LIN7AO14910 233 aaPredicted RBP12.53□□□□□ -0.4
PTPN1-201ENST00000371621 RSPH10BP0C881 870 aa12.53□□□□□ -0.4
PTPN1-201ENST00000371621 PABPC4Q13310 644 aaKnown RBP eCLIP12.53□□□□□ -0.41e-11■■■■□ 24.4
PTPN1-201ENST00000371621 SYCP2LQ5T4T6 812 aa12.53□□□□□ -0.4
PTPN1-201ENST00000371621 CDCA2Q69YH5 1023 aaPredicted RBP12.53□□□□□ -0.4
PTPN1-201ENST00000371621 RNF207Q6ZRF8 634 aa12.53□□□□□ -0.4
PTPN1-201ENST00000371621 COL23A1Q86Y22 540 aaPredicted RBP12.53□□□□□ -0.4
PTPN1-201ENST00000371621 ERMNQ8TAM6 284 aa12.53□□□□□ -0.4
PTPN1-201ENST00000371621 SLC35G2Q8TBE7 412 aa12.53□□□□□ -0.4
PTPN1-201ENST00000371621 TRIM9Q9C026 710 aa12.53□□□□□ -0.4
PTPN1-201ENST00000371621 FAM192AQ9GZU8 254 aa12.53□□□□□ -0.4
PTPN1-201ENST00000371621 PCDHA12Q9UN75 941 aa12.53□□□□□ -0.4
PTPN1-201ENST00000371621 ADGRB1O14514 1584 aa12.53□□□□□ -0.4
PTPN1-201ENST00000371621 CALUO43852 315 aaPredicted RBP12.53□□□□□ -0.4
PTPN1-201ENST00000371621 IMPDH2P12268 514 aa12.53□□□□□ -0.4
PTPN1-201ENST00000371621 CHRNA3P32297 505 aa12.53□□□□□ -0.4
PTPN1-201ENST00000371621 SLC5A9Q2M3M2 681 aa12.53□□□□□ -0.4
PTPN1-201ENST00000371621 TTBK2Q6IQ55 1244 aa12.53□□□□□ -0.4
PTPN1-201ENST00000371621 TLDC1Q6P9B6 456 aa12.53□□□□□ -0.4
PTPN1-201ENST00000371621 ANKMY2Q8IV38 441 aa12.53□□□□□ -0.4
PTPN1-201ENST00000371621 ZSCAN29Q8IWY8 852 aaPredicted RBP12.53□□□□□ -0.4
PTPN1-201ENST00000371621 GRK7Q8WTQ7 553 aa12.53□□□□□ -0.4
PTPN1-201ENST00000371621 PLEKHG4BQ96PX9 1271 aa12.53□□□□□ -0.4
PTPN1-201ENST00000371621 PRPF18Q99633 342 aaKnown RBP12.53□□□□□ -0.4
PTPN1-201ENST00000371621 BHMT2Q9H2M3 363 aa12.53□□□□□ -0.4
PTPN1-201ENST00000371621 DENND2DQ9H6A0 471 aaPredicted RBP12.53□□□□□ -0.4
PTPN1-201ENST00000371621 OSGEPQ9NPF4 335 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms