RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 DAB2IPQ5VWQ8 1189 aa12.72□□□□□ -0.37
PDE6C-201ENST00000371447 GADL1Q6ZQY3 521 aa12.72□□□□□ -0.37
PDE6C-201ENST00000371447 CDR2LQ86X02 465 aaPredicted RBP12.72□□□□□ -0.37
PDE6C-201ENST00000371447 CCDC60Q8IWA6 550 aaPredicted RBP12.72□□□□□ -0.37
PDE6C-201ENST00000371447 TAS1R2Q8TE23 839 aa12.72□□□□□ -0.37
PDE6C-201ENST00000371447 SEMA4DQ92854 862 aa12.72□□□□□ -0.37
PDE6C-201ENST00000371447 FAM107BQ9H098 131 aa12.72□□□□□ -0.37
PDE6C-201ENST00000371447 R3HDMLQ9H3Y0 253 aa12.72□□□□□ -0.37
PDE6C-201ENST00000371447 A1CFQ9NQ94 594 aaKnown RBP12.72□□□□□ -0.37
PDE6C-201ENST00000371447 TBC1D22BQ9NU19 505 aa12.72□□□□□ -0.37
PDE6C-201ENST00000371447 SEL1LQ9UBV2 794 aa12.72□□□□□ -0.37
PDE6C-201ENST00000371447 NOC2LQ9Y3T9 749 aaKnown RBP12.72□□□□□ -0.37
PDE6C-201ENST00000371447 BZW2Q9Y6E2 419 aaKnown RBP12.72□□□□□ -0.37
PDE6C-201ENST00000371447 TNNI1P19237 187 aa12.72□□□□□ -0.37
PDE6C-201ENST00000371447 ZNF131P52739 623 aa12.72□□□□□ -0.37
PDE6C-201ENST00000371447 TUBB4BP68371 445 aa12.72□□□□□ -0.37
PDE6C-201ENST00000371447 ZSCAN26Q16670 478 aa12.72□□□□□ -0.37
PDE6C-201ENST00000371447 FKBP1CQ5VVH2 108 aa12.72□□□□□ -0.37
PDE6C-201ENST00000371447 LEKR1Q6ZMV7 388 aa12.72□□□□□ -0.37
PDE6C-201ENST00000371447 MMGT1Q8N4V1 131 aa12.72□□□□□ -0.37
PDE6C-201ENST00000371447 CASKIN2Q8WXE0 1202 aa12.72□□□□□ -0.37
PDE6C-201ENST00000371447 TATDN2Q93075 761 aa12.72□□□□□ -0.37
PDE6C-201ENST00000371447 ARL8AQ96BM9 186 aa12.72□□□□□ -0.37
PDE6C-201ENST00000371447 ZBTB45Q96K62 511 aaPredicted RBP12.72□□□□□ -0.37
PDE6C-201ENST00000371447 TCHPQ9BT92 498 aa12.72□□□□□ -0.37
PDE6C-201ENST00000371447 TMEM117Q9H0C3 514 aa12.72□□□□□ -0.37
PDE6C-201ENST00000371447 GOLGA6CA6NDK9 693 aa12.71□□□□□ -0.37
PDE6C-201ENST00000371447 ZEB2O60315 1214 aa12.71□□□□□ -0.37
PDE6C-201ENST00000371447 DDNO94850 711 aaPredicted RBP12.71□□□□□ -0.37
PDE6C-201ENST00000371447 GOLGA6DP0CG33 693 aa12.71□□□□□ -0.37
PDE6C-201ENST00000371447 BCRP11274 1271 aa12.71□□□□□ -0.37
PDE6C-201ENST00000371447 ADSSP30520 456 aa12.71□□□□□ -0.37
PDE6C-201ENST00000371447 HPDP32754 393 aaPredicted RBP12.71□□□□□ -0.37
PDE6C-201ENST00000371447 MARCKSL1P49006 195 aa12.71□□□□□ -0.37
PDE6C-201ENST00000371447 SPOPLQ6IQ16 392 aa12.71□□□□□ -0.37
PDE6C-201ENST00000371447 PASD1Q8IV76 773 aa12.71□□□□□ -0.37
PDE6C-201ENST00000371447 IFT20Q8IY31 132 aa12.71□□□□□ -0.37
PDE6C-201ENST00000371447 SCYL3Q8IZE3 742 aa12.71□□□□□ -0.37
PDE6C-201ENST00000371447 TRIM51Q9BSJ1 452 aa12.71□□□□□ -0.37
PDE6C-201ENST00000371447 GOLGA6AQ9NYA3 693 aa12.71□□□□□ -0.37
PDE6C-201ENST00000371447 RSPH14Q9UHP6 348 aa12.71□□□□□ -0.37
PDE6C-201ENST00000371447 AMFRQ9UKV5 643 aa12.71□□□□□ -0.37
PDE6C-201ENST00000371447 PCDHGC5Q9Y5F6 944 aa12.71□□□□□ -0.37
PDE6C-201ENST00000371447 TTI1O43156 1089 aa12.71□□□□□ -0.38
PDE6C-201ENST00000371447 SART1O43290 800 aaKnown RBP12.71□□□□□ -0.38
PDE6C-201ENST00000371447 CCND2P30279 289 aa12.71□□□□□ -0.38
PDE6C-201ENST00000371447 PRKCEQ02156 737 aa12.71□□□□□ -0.38
PDE6C-201ENST00000371447 MKRN3Q13064 507 aaKnown RBP12.71□□□□□ -0.38
PDE6C-201ENST00000371447 ZFYVE27Q5T4F4 411 aa12.71□□□□□ -0.38
PDE6C-201ENST00000371447 DCAF15Q66K64 600 aa12.71□□□□□ -0.38
PDE6C-201ENST00000371447 ZC3H3Q8IXZ2 948 aaKnown RBP12.71□□□□□ -0.38
PDE6C-201ENST00000371447 AFAP1L1Q8TED9 768 aa12.71□□□□□ -0.38
PDE6C-201ENST00000371447 GLG1Q92896 1179 aa12.71□□□□□ -0.38
PDE6C-201ENST00000371447 HSF2BPO75031 334 aa12.7□□□□□ -0.38
PDE6C-201ENST00000371447 MMEP08473 750 aa12.7□□□□□ -0.38
PDE6C-201ENST00000371447 POLGP54098 1239 aaPredicted RBP12.7□□□□□ -0.38
PDE6C-201ENST00000371447 JAM2P57087 298 aa12.7□□□□□ -0.38
PDE6C-201ENST00000371447 OSTNP61366 133 aa12.7□□□□□ -0.38
PDE6C-201ENST00000371447 INTS8Q75QN2 995 aaKnown RBP12.7□□□□□ -0.38
PDE6C-201ENST00000371447 USP38Q8NB14 1042 aa12.7□□□□□ -0.38
PDE6C-201ENST00000371447 NSUN6Q8TEA1 469 aaKnown RBP12.7□□□□□ -0.38
PDE6C-201ENST00000371447 MOV10L1Q9BXT6 1211 aaKnown RBP12.7□□□□□ -0.38
PDE6C-201ENST00000371447 TMEM206Q9H813 350 aa12.7□□□□□ -0.38
PDE6C-201ENST00000371447 JPH1Q9HDC5 661 aaPredicted RBP12.7□□□□□ -0.38
PDE6C-201ENST00000371447 TBX20Q9UMR3 447 aa12.7□□□□□ -0.38
PDE6C-201ENST00000371447 PTPN22Q9Y2R2 807 aa12.7□□□□□ -0.38
PDE6C-201ENST00000371447 ADGRA3Q8IWK6 1321 aa12.7□□□□□ -0.38
PDE6C-201ENST00000371447 DAPK3O43293 454 aa12.7□□□□□ -0.38
PDE6C-201ENST00000371447 RGS20O76081 388 aa12.7□□□□□ -0.38
PDE6C-201ENST00000371447 PGK2P07205 417 aa12.7□□□□□ -0.38
PDE6C-201ENST00000371447 ACTR2P61160 394 aa12.7□□□□□ -0.38
PDE6C-201ENST00000371447 TNNC1P63316 161 aa12.7□□□□□ -0.38
PDE6C-201ENST00000371447 SP2Q02086 613 aa12.7□□□□□ -0.38
PDE6C-201ENST00000371447 ZBTB33Q86T24 672 aa12.7□□□□□ -0.38
PDE6C-201ENST00000371447 FAM71BQ8TC56 605 aa12.7□□□□□ -0.38
PDE6C-201ENST00000371447 OTUD5Q96G74 571 aa12.7□□□□□ -0.38
PDE6C-201ENST00000371447 INPP4AQ96PE3 977 aaPredicted RBP12.7□□□□□ -0.38
PDE6C-201ENST00000371447 AGPAT1Q99943 283 aa12.7□□□□□ -0.38
PDE6C-201ENST00000371447 UBXN6Q9BZV1 441 aa12.7□□□□□ -0.38
PDE6C-201ENST00000371447 COG5Q9UP83 839 aa12.7□□□□□ -0.38
PDE6C-201ENST00000371447 TARSL2A2RTX5 802 aaKnown RBP12.7□□□□□ -0.38
PDE6C-201ENST00000371447 AGPSO00116 658 aa12.7□□□□□ -0.38
PDE6C-201ENST00000371447 IFI16Q16666 785 aaKnown RBP12.7□□□□□ -0.38
PDE6C-201ENST00000371447 TMEM132AQ24JP5 1023 aa12.7□□□□□ -0.38
PDE6C-201ENST00000371447 TREML2Q5T2D2 321 aa12.7□□□□□ -0.38
PDE6C-201ENST00000371447 CFAP58Q5T655 872 aa12.7□□□□□ -0.38
PDE6C-201ENST00000371447 TRIM50Q86XT4 487 aa12.7□□□□□ -0.38
PDE6C-201ENST00000371447 UBLCP1Q8WVY7 318 aaPredicted RBP12.7□□□□□ -0.38
PDE6C-201ENST00000371447 KRT35Q92764 455 aa12.7□□□□□ -0.38
PDE6C-201ENST00000371447 ZBED3Q96IU2 234 aaPredicted RBP12.7□□□□□ -0.38
PDE6C-201ENST00000371447 GPR88Q9GZN0 384 aa12.7□□□□□ -0.38
PDE6C-201ENST00000371447 POLR3FQ9H1D9 316 aaPredicted RBP12.7□□□□□ -0.38
PDE6C-201ENST00000371447 DMAC2Q9NW81 257 aa12.7□□□□□ -0.38
PDE6C-201ENST00000371447 C10orf71Q711Q0 1435 aa12.69□□□□□ -0.38
PDE6C-201ENST00000371447 ADM5C9JUS6 153 aa12.69□□□□□ -0.38
PDE6C-201ENST00000371447 PGRMC1O00264 195 aaKnown RBP12.69□□□□□ -0.38
PDE6C-201ENST00000371447 CSDE1O75534 798 aaKnown RBP12.69□□□□□ -0.38
PDE6C-201ENST00000371447 LMNB1P20700 586 aa12.69□□□□□ -0.38
PDE6C-201ENST00000371447 ZNF394Q53GI3 561 aa12.69□□□□□ -0.38
PDE6C-201ENST00000371447 B3GNT9Q6UX72 402 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms