RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 PALB2Q86YC2 1186 aa31.33■■■□□ 2.61
SSBP3-204ENST00000371320 SCYL3Q8IZE3 742 aa31.33■■■□□ 2.61
SSBP3-204ENST00000371320 FAM76AQ8TAV0 307 aa31.33■■■□□ 2.61
SSBP3-204ENST00000371320 THAP2Q9H0W7 228 aa31.33■■■□□ 2.61
SSBP3-204ENST00000371320 CNOT7Q9UIV1 285 aaKnown RBP31.33■■■□□ 2.61
SSBP3-204ENST00000371320 PCDHA10Q9Y5I2 948 aa31.33■■■□□ 2.61
SSBP3-204ENST00000371320 GOLGA8IPA6NC78 632 aa31.32■■■□□ 2.6
SSBP3-204ENST00000371320 GOLGA8JA6NMD2 632 aa31.32■■■□□ 2.6
SSBP3-204ENST00000371320 NR3C2P08235 984 aa31.32■■■□□ 2.6
SSBP3-204ENST00000371320 MXI1P50539 228 aa31.32■■■□□ 2.6
SSBP3-204ENST00000371320 PPATQ06203 517 aa31.32■■■□□ 2.6
SSBP3-204ENST00000371320 ANO5Q75V66 913 aa31.32■■■□□ 2.6
SSBP3-204ENST00000371320 SLC20A1Q8WUM9 679 aa31.32■■■□□ 2.6
SSBP3-204ENST00000371320 ARHGEF26Q96DR7 871 aa31.32■■■□□ 2.6
SSBP3-204ENST00000371320 AS3MTQ9HBK9 375 aa31.32■■■□□ 2.6
SSBP3-204ENST00000371320 TBX20Q9UMR3 447 aa31.32■■■□□ 2.6
SSBP3-204ENST00000371320 GJA3Q9Y6H8 435 aa31.32■■■□□ 2.6
SSBP3-204ENST00000371320 CCDC188H7C350 402 aa31.31■■■□□ 2.6
SSBP3-204ENST00000371320 TMEM161BQ8NDZ6 487 aa31.31■■■□□ 2.6
SSBP3-204ENST00000371320 WHAMMQ8TF30 809 aa31.31■■■□□ 2.6
SSBP3-204ENST00000371320 GPRASP2Q96D09 838 aa31.31■■■□□ 2.6
SSBP3-204ENST00000371320 TMEM117Q9H0C3 514 aa31.31■■■□□ 2.6
SSBP3-204ENST00000371320 NPTX2P47972 431 aa31.31■■■□□ 2.6
SSBP3-204ENST00000371320 GUCY2FP51841 1108 aa31.31■■■□□ 2.6
SSBP3-204ENST00000371320 DMP1Q13316 513 aaPredicted RBP31.31■■■□□ 2.6
SSBP3-204ENST00000371320 TRADDQ15628 312 aa31.31■■■□□ 2.6
SSBP3-204ENST00000371320 ZNF280CQ8ND82 737 aa31.31■■■□□ 2.6
SSBP3-204ENST00000371320 PICK1Q9NRD5 415 aa31.31■■■□□ 2.6
SSBP3-204ENST00000371320 PMM2O15305 246 aa31.3■■■□□ 2.6
SSBP3-204ENST00000371320 CLSTN1O94985 981 aa31.3■■■□□ 2.6
SSBP3-204ENST00000371320 ADRB2P07550 413 aa31.3■■■□□ 2.6
SSBP3-204ENST00000371320 PPFIA1Q13136 1202 aa31.3■■■□□ 2.6
SSBP3-204ENST00000371320 SNRNP48Q6IEG0 339 aaKnown RBP31.3■■■□□ 2.6
SSBP3-204ENST00000371320 ZKSCAN4Q969J2 545 aaPredicted RBP31.3■■■□□ 2.6
SSBP3-204ENST00000371320 SENP7Q9BQF6 1050 aa31.3■■■□□ 2.6
SSBP3-204ENST00000371320 TAF1DQ9H5J8 278 aaPredicted RBP31.3■■■□□ 2.6
SSBP3-204ENST00000371320 FAM170AA1A519 330 aa31.29■■■□□ 2.6
SSBP3-204ENST00000371320 ANKRD63C9JTQ0 380 aa31.29■■■□□ 2.6
SSBP3-204ENST00000371320 TULP1O00294 542 aaPredicted RBP31.29■■■□□ 2.6
SSBP3-204ENST00000371320 SART1O43290 800 aaKnown RBP31.29■■■□□ 2.6
SSBP3-204ENST00000371320 ZBTB7AO95365 584 aa31.29■■■□□ 2.6
SSBP3-204ENST00000371320 SNRNP35Q16560 246 aaKnown RBP31.29■■■□□ 2.6
SSBP3-204ENST00000371320 OTUD6AQ7L8S5 288 aa31.29■■■□□ 2.6
SSBP3-204ENST00000371320 MREGQ8N565 214 aa31.29■■■□□ 2.6
SSBP3-204ENST00000371320 HVCN1Q96D96 273 aa31.29■■■□□ 2.6
SSBP3-204ENST00000371320 ISCUQ9H1K1 167 aa31.29■■■□□ 2.6
SSBP3-204ENST00000371320 MAFGO15525 162 aa31.29■■■□□ 2.6
SSBP3-204ENST00000371320 ADSSP30520 456 aa31.29■■■□□ 2.6
SSBP3-204ENST00000371320 CBWD2Q8IUF1 395 aa31.29■■■□□ 2.6
SSBP3-204ENST00000371320 MAP4K3Q8IVH8 894 aa31.29■■■□□ 2.6
SSBP3-204ENST00000371320 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP31.29■■■□□ 2.61e-9■■■■■ 83.4
SSBP3-204ENST00000371320 ZIM3Q96PE6 472 aa31.29■■■□□ 2.6
SSBP3-204ENST00000371320 KIFC3Q9BVG8 833 aa31.29■■■□□ 2.6
SSBP3-204ENST00000371320 GABBR1Q9UBS5 961 aa31.29■■■□□ 2.6
SSBP3-204ENST00000371320 RPS6KA5O75582 802 aa31.28■■■□□ 2.6
SSBP3-204ENST00000371320 PTPRAP18433 802 aa31.28■■■□□ 2.6
SSBP3-204ENST00000371320 USP8P40818 1118 aa31.28■■■□□ 2.6
SSBP3-204ENST00000371320 ERVK-9P63128 1117 aa31.28■■■□□ 2.6
SSBP3-204ENST00000371320 CFAP58Q5T655 872 aa31.28■■■□□ 2.6
SSBP3-204ENST00000371320 EIF1ADQ8N9N8 165 aaKnown RBP31.28■■■□□ 2.6
SSBP3-204ENST00000371320 REPS2Q8NFH8 660 aa31.28■■■□□ 2.6
SSBP3-204ENST00000371320 WRNIP1Q96S55 665 aa31.28■■■□□ 2.6
SSBP3-204ENST00000371320 DDX47Q9H0S4 455 aaKnown RBP31.28■■■□□ 2.6
SSBP3-204ENST00000371320 KMT5AQ9NQR1 393 aa31.28■■■□□ 2.6
SSBP3-204ENST00000371320 CWC15Q9P013 229 aaKnown RBP31.28■■■□□ 2.6
SSBP3-204ENST00000371320 USP20Q9Y2K6 914 aa31.28■■■□□ 2.6
SSBP3-204ENST00000371320 DENND3A2RUS2 1198 aa31.28■■■□□ 2.6
SSBP3-204ENST00000371320 CNGA1P29973 690 aa31.28■■■□□ 2.6
SSBP3-204ENST00000371320 RPUSD2Q8IZ73 545 aaKnown RBP31.28■■■□□ 2.6
SSBP3-204ENST00000371320 KIFAP3Q92845 792 aa31.28■■■□□ 2.6
SSBP3-204ENST00000371320 SAAL1Q96ER3 474 aa31.28■■■□□ 2.6
SSBP3-204ENST00000371320 CEP170P1Q96L14 293 aa31.28■■■□□ 2.6
SSBP3-204ENST00000371320 ZNF112Q9UJU3 913 aa31.28■■■□□ 2.6
SSBP3-204ENST00000371320 DIS3Q9Y2L1 958 aaKnown RBP31.28■■■□□ 2.6
SSBP3-204ENST00000371320 ITGA4P13612 1032 aa31.27■■■□□ 2.6
SSBP3-204ENST00000371320 HMGCS2P54868 508 aa31.27■■■□□ 2.6
SSBP3-204ENST00000371320 MAP2K1Q02750 393 aaPredicted RBP31.27■■■□□ 2.6
SSBP3-204ENST00000371320 RHOT2Q8IXI1 618 aa31.27■■■□□ 2.6
SSBP3-204ENST00000371320 NSUN6Q8TEA1 469 aaKnown RBP31.27■■■□□ 2.6
SSBP3-204ENST00000371320 KAT5Q92993 513 aa31.27■■■□□ 2.6
SSBP3-204ENST00000371320 TTC7AQ9ULT0 858 aaPredicted RBP31.27■■■□□ 2.6
SSBP3-204ENST00000371320 DDX3YO15523 660 aaKnown RBP31.26■■■□□ 2.6
SSBP3-204ENST00000371320 FTLP02792 175 aaPredicted RBP31.26■■■□□ 2.6
SSBP3-204ENST00000371320 OAZ1P54368 228 aa31.26■■■□□ 2.6
SSBP3-204ENST00000371320 CUL1Q13616 776 aa31.26■■■□□ 2.6
SSBP3-204ENST00000371320 HLTFQ14527 1009 aaKnown RBP eCLIP31.26■■■□□ 2.6
SSBP3-204ENST00000371320 IQCKQ8N0W5 287 aa31.26■■■□□ 2.6
SSBP3-204ENST00000371320 ATP6V0A1Q93050 837 aa31.26■■■□□ 2.6
SSBP3-204ENST00000371320 CCDC127Q96BQ5 260 aa31.26■■■□□ 2.6
SSBP3-204ENST00000371320 PPP1R1BQ9UD71 204 aaPredicted RBP31.26■■■□□ 2.6
SSBP3-204ENST00000371320 COG5Q9UP83 839 aa31.26■■■□□ 2.6
SSBP3-204ENST00000371320 DSG3P32926 999 aa31.26■■■□□ 2.59
SSBP3-204ENST00000371320 MCCD1P59942 119 aaPredicted RBP31.26■■■□□ 2.59
SSBP3-204ENST00000371320 SPIRE2Q8WWL2 714 aa31.26■■■□□ 2.59
SSBP3-204ENST00000371320 SLITRK6Q9H5Y7 841 aa31.26■■■□□ 2.59
SSBP3-204ENST00000371320 UTP3Q9NQZ2 479 aaKnown RBP eCLIP31.26■■■□□ 2.596e-7■■■■■ 128.1
SSBP3-204ENST00000371320 ZNF862O60290 1169 aa31.25■■■□□ 2.59
SSBP3-204ENST00000371320 IVLP07476 585 aa31.25■■■□□ 2.59
SSBP3-204ENST00000371320 BSNDQ8WZ55 320 aa31.25■■■□□ 2.59
SSBP3-204ENST00000371320 DKC1O60832 514 aaKnown RBP eCLIP31.25■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms