RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 ZC3H18Q86VM9 953 aaKnown RBP23.57■■□□□ 1.36
TM9SF3-201ENST00000371142 ELMSAN1Q6PJG2 1045 aa23.56■■□□□ 1.36
TM9SF3-201ENST00000371142 TTC8Q8TAM2 541 aa23.56■■□□□ 1.36
TM9SF3-201ENST00000371142 KIF1BO60333 1816 aa23.56■■□□□ 1.36
TM9SF3-201ENST00000371142 NEMP1O14524 444 aa23.56■■□□□ 1.36
TM9SF3-201ENST00000371142 MAGI3Q5TCQ9 1506 aa23.56■■□□□ 1.36
TM9SF3-201ENST00000371142 SYNDIG1LA6NDD5 238 aa23.56■■□□□ 1.36
TM9SF3-201ENST00000371142 ST13P4Q8IZP2 240 aaPredicted RBP23.56■■□□□ 1.36
TM9SF3-201ENST00000371142 MMP19Q99542 508 aa23.56■■□□□ 1.36
TM9SF3-201ENST00000371142 NARFQ9UHQ1 456 aa23.56■■□□□ 1.36
TM9SF3-201ENST00000371142 TEX33O43247 280 aa23.56■■□□□ 1.36
TM9SF3-201ENST00000371142 TRIM49P0CI25 452 aa23.56■■□□□ 1.36
TM9SF3-201ENST00000371142 TRIM49CP0CI26 452 aa23.56■■□□□ 1.36
TM9SF3-201ENST00000371142 NT5C2P49902 561 aa23.56■■□□□ 1.36
TM9SF3-201ENST00000371142 SPP2Q13103 211 aa23.56■■□□□ 1.36
TM9SF3-201ENST00000371142 TTLL4Q14679 1199 aa23.56■■□□□ 1.36
TM9SF3-201ENST00000371142 RGS9BPQ6ZS82 235 aa23.56■■□□□ 1.36
TM9SF3-201ENST00000371142 URGCPQ8TCY9 931 aa23.56■■□□□ 1.36
TM9SF3-201ENST00000371142 E5RI56 91 aa23.56■■□□□ 1.36
TM9SF3-201ENST00000371142 SMARCA1P28370 1054 aa23.56■■□□□ 1.36
TM9SF3-201ENST00000371142 CAV1Q03135 178 aa23.56■■□□□ 1.36
TM9SF3-201ENST00000371142 PDIA2Q13087 525 aaKnown RBP23.56■■□□□ 1.36
TM9SF3-201ENST00000371142 SPATA33Q96N06 139 aa23.56■■□□□ 1.36
TM9SF3-201ENST00000371142 MYO3BQ8WXR4 1341 aa23.55■■□□□ 1.36
TM9SF3-201ENST00000371142 SFNP31947 248 aa23.55■■□□□ 1.36
TM9SF3-201ENST00000371142 ROR1Q01973 937 aa23.55■■□□□ 1.36
TM9SF3-201ENST00000371142 ANO4Q32M45 955 aa23.55■■□□□ 1.36
TM9SF3-201ENST00000371142 ZBED8Q8IZ13 594 aa23.55■■□□□ 1.36
TM9SF3-201ENST00000371142 EIF2AK1Q9BQI3 630 aaKnown RBP23.55■■□□□ 1.36
TM9SF3-201ENST00000371142 ULK4Q96C45 1275 aa23.55■■□□□ 1.36
TM9SF3-201ENST00000371142 BPIFA3Q9BQP9 254 aa23.55■■□□□ 1.36
TM9SF3-201ENST00000371142 SLC13A1Q9BZW2 595 aa23.55■■□□□ 1.36
TM9SF3-201ENST00000371142 STK25O00506 426 aa23.55■■□□□ 1.36
TM9SF3-201ENST00000371142 E2F4Q16254 413 aa23.55■■□□□ 1.36
TM9SF3-201ENST00000371142 DIAPH2O60879 1101 aa23.55■■□□□ 1.36
TM9SF3-201ENST00000371142 NAALADL2Q58DX5 795 aa23.55■■□□□ 1.36
TM9SF3-201ENST00000371142 C1orf146Q5VVC0 180 aa23.55■■□□□ 1.36
TM9SF3-201ENST00000371142 RNF135Q8IUD6 432 aa23.55■■□□□ 1.36
TM9SF3-201ENST00000371142 MRPL4Q9BYD3 311 aaKnown RBP23.55■■□□□ 1.36
TM9SF3-201ENST00000371142 LCMT1Q9UIC8 334 aa23.55■■□□□ 1.36
TM9SF3-201ENST00000371142 F5H6K3 240 aa23.55■■□□□ 1.36
TM9SF3-201ENST00000371142 FCER1AP12319 257 aa23.55■■□□□ 1.36
TM9SF3-201ENST00000371142 KLRC3Q07444 240 aa23.55■■□□□ 1.36
TM9SF3-201ENST00000371142 SP110Q9HB58 689 aa23.55■■□□□ 1.36
TM9SF3-201ENST00000371142 KRT14P02533 472 aa23.54■■□□□ 1.36
TM9SF3-201ENST00000371142 LBRQ14739 615 aaKnown RBP23.54■■□□□ 1.36
TM9SF3-201ENST00000371142 C2orf40Q9H1Z8 148 aa23.54■■□□□ 1.36
TM9SF3-201ENST00000371142 DCAF4L1Q3SXM0 396 aa23.54■■□□□ 1.36
TM9SF3-201ENST00000371142 DHX35Q9H5Z1 703 aaKnown RBP23.54■■□□□ 1.36
TM9SF3-201ENST00000371142 AFF4Q9UHB7 1163 aaKnown RBP23.54■■□□□ 1.36
TM9SF3-201ENST00000371142 STAP1Q9ULZ2 295 aa23.54■■□□□ 1.36
TM9SF3-201ENST00000371142 FOXN1O15353 648 aa23.54■■□□□ 1.36
TM9SF3-201ENST00000371142 SLC9A2Q9UBY0 812 aa23.54■■□□□ 1.36
TM9SF3-201ENST00000371142 ANO9A1A5B4 782 aa23.54■■□□□ 1.36
TM9SF3-201ENST00000371142 FAM102AQ5T9C2 384 aaPredicted RBP23.54■■□□□ 1.36
TM9SF3-201ENST00000371142 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.54■■□□□ 1.365e-7■■□□□ 13.7
TM9SF3-201ENST00000371142 C1orf54Q8WWF1 131 aa23.53■■□□□ 1.36
TM9SF3-201ENST00000371142 CENPKQ9BS16 269 aa23.53■■□□□ 1.36
TM9SF3-201ENST00000371142 RBAKQ9NYW8 714 aaPredicted RBP23.53■■□□□ 1.36
TM9SF3-201ENST00000371142 SUFUQ9UMX1 484 aa23.53■■□□□ 1.36
TM9SF3-201ENST00000371142 PYGBP11216 843 aa23.53■■□□□ 1.36
TM9SF3-201ENST00000371142 LRRC14Q15048 493 aa23.53■■□□□ 1.36
TM9SF3-201ENST00000371142 CC2D1AQ6P1N0 951 aaPredicted RBP23.53■■□□□ 1.36
TM9SF3-201ENST00000371142 DHX40Q8IX18 779 aaKnown RBP23.53■■□□□ 1.36
TM9SF3-201ENST00000371142 HNRNPH2P55795 449 aaKnown RBP23.53■■□□□ 1.36
TM9SF3-201ENST00000371142 BTBD6Q96KE9 485 aa23.53■■□□□ 1.36
TM9SF3-201ENST00000371142 SIK2Q9H0K1 926 aa23.53■■□□□ 1.36
TM9SF3-201ENST00000371142 CDC42BPGQ6DT37 1551 aa23.53■■□□□ 1.36
TM9SF3-201ENST00000371142 CPSF1Q10570 1443 aaKnown RBP23.53■■□□□ 1.36
TM9SF3-201ENST00000371142 NPHP3-ACAD11A0A0J9YXS1 232 aa23.53■■□□□ 1.36
TM9SF3-201ENST00000371142 A8MXQ7 604 aa23.53■■□□□ 1.36
TM9SF3-201ENST00000371142 PSMC5P62195 406 aa23.53■■□□□ 1.36
TM9SF3-201ENST00000371142 CCDC144BQ3MJ40 725 aa23.53■■□□□ 1.36
TM9SF3-201ENST00000371142 ACCSLQ4AC99 568 aa23.53■■□□□ 1.36
TM9SF3-201ENST00000371142 DYNC1LI1Q9Y6G9 523 aaKnown RBP23.53■■□□□ 1.36
TM9SF3-201ENST00000371142 EMSYQ7Z589 1322 aa23.53■■□□□ 1.36
TM9SF3-201ENST00000371142 TTC26A0AVF1 554 aa23.53■■□□□ 1.36
TM9SF3-201ENST00000371142 MCF2P10911 925 aa23.53■■□□□ 1.36
TM9SF3-201ENST00000371142 GPD1LQ8N335 351 aa23.53■■□□□ 1.36
TM9SF3-201ENST00000371142 CALR3Q96L12 384 aaKnown RBP23.53■■□□□ 1.36
TM9SF3-201ENST00000371142 KIF28PB7ZC32 967 aa23.52■■□□□ 1.36
TM9SF3-201ENST00000371142 NR1H3Q13133 447 aa23.52■■□□□ 1.36
TM9SF3-201ENST00000371142 MORF4L2Q15014 288 aa23.52■■□□□ 1.36
TM9SF3-201ENST00000371142 EFHC2Q5JST6 749 aa23.52■■□□□ 1.36
TM9SF3-201ENST00000371142 OTUD5Q96G74 571 aa23.52■■□□□ 1.36
TM9SF3-201ENST00000371142 EGFL8Q99944 293 aa23.52■■□□□ 1.36
TM9SF3-201ENST00000371142 MAGEB5Q9BZ81 275 aa23.52■■□□□ 1.36
TM9SF3-201ENST00000371142 USP27XA6NNY8 438 aa23.52■■□□□ 1.36
TM9SF3-201ENST00000371142 LMNAP02545 664 aaKnown RBP23.52■■□□□ 1.36
TM9SF3-201ENST00000371142 LCP1P13796 627 aa23.52■■□□□ 1.36
TM9SF3-201ENST00000371142 LMBRD2Q68DH5 695 aaPredicted RBP23.52■■□□□ 1.36
TM9SF3-201ENST00000371142 RAPGEF5Q92565 580 aa23.52■■□□□ 1.36
TM9SF3-201ENST00000371142 TGS1Q96RS0 853 aaKnown RBP23.52■■□□□ 1.36
TM9SF3-201ENST00000371142 NOP53Q9NZM5 478 aaKnown RBP23.52■■□□□ 1.36
TM9SF3-201ENST00000371142 GLYCTKQ8IVS8 523 aa23.52■■□□□ 1.36
TM9SF3-201ENST00000371142 EPC1Q9H2F5 836 aa23.52■■□□□ 1.36
TM9SF3-201ENST00000371142 TRIM33Q9UPN9 1127 aa23.52■■□□□ 1.36
TM9SF3-201ENST00000371142 SLC4A7Q9Y6M7 1214 aa23.52■■□□□ 1.36
TM9SF3-201ENST00000371142 WDR19Q8NEZ3 1342 aa23.52■■□□□ 1.36
TM9SF3-201ENST00000371142 PIK3R2O00459 728 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms