RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 GINM1Q9NU53 330 aa12.66□□□□□ -0.38
DEPDC1-201ENST00000370966 GMNCA6NCL1 334 aa12.65□□□□□ -0.38
DEPDC1-201ENST00000370966 RASA4BC9J798 803 aa12.65□□□□□ -0.38
DEPDC1-201ENST00000370966 MYO1CO00159 1063 aa12.65□□□□□ -0.38
DEPDC1-201ENST00000370966 RASA4O43374 803 aa12.65□□□□□ -0.38
DEPDC1-201ENST00000370966 PLS3P13797 630 aa12.65□□□□□ -0.38
DEPDC1-201ENST00000370966 YWHABP31946 246 aaKnown RBP12.65□□□□□ -0.38
DEPDC1-201ENST00000370966 GPC3P51654 580 aa12.65□□□□□ -0.38
DEPDC1-201ENST00000370966 CCDC137Q6PK04 289 aaKnown RBP12.65□□□□□ -0.38
DEPDC1-201ENST00000370966 KSR1Q8IVT5 923 aa12.65□□□□□ -0.38
DEPDC1-201ENST00000370966 PDCD7Q8N8D1 485 aaKnown RBP12.65□□□□□ -0.38
DEPDC1-201ENST00000370966 RIT2Q99578 217 aa12.65□□□□□ -0.38
DEPDC1-201ENST00000370966 ELAC2Q9BQ52 826 aaKnown RBP12.65□□□□□ -0.38
DEPDC1-201ENST00000370966 DONSONQ9NYP3 566 aa12.65□□□□□ -0.38
DEPDC1-201ENST00000370966 RBAKQ9NYW8 714 aaPredicted RBP12.65□□□□□ -0.38
DEPDC1-201ENST00000370966 UVRAGQ9P2Y5 699 aa12.65□□□□□ -0.38
DEPDC1-201ENST00000370966 PACSIN2Q9UNF0 486 aaPredicted RBP12.65□□□□□ -0.38
DEPDC1-201ENST00000370966 KRT38O76015 456 aa12.65□□□□□ -0.38
DEPDC1-201ENST00000370966 FMO5P49326 533 aa12.65□□□□□ -0.38
DEPDC1-201ENST00000370966 HDLBPQ00341 1268 aaKnown RBP12.65□□□□□ -0.38
DEPDC1-201ENST00000370966 TAP1Q03518 808 aa12.65□□□□□ -0.38
DEPDC1-201ENST00000370966 RCN2Q14257 317 aa12.65□□□□□ -0.38
DEPDC1-201ENST00000370966 DUOXA2Q1HG44 320 aa12.65□□□□□ -0.38
DEPDC1-201ENST00000370966 SYN2Q92777 582 aaPredicted RBP12.65□□□□□ -0.38
DEPDC1-201ENST00000370966 VCPKMTQ9H867 229 aa12.65□□□□□ -0.38
DEPDC1-201ENST00000370966 SLC9A2Q9UBY0 812 aa12.65□□□□□ -0.38
DEPDC1-201ENST00000370966 ZNRF3Q9ULT6 936 aa12.65□□□□□ -0.38
DEPDC1-201ENST00000370966 SPATA31A5Q5VU36 1347 aa12.65□□□□□ -0.38
DEPDC1-201ENST00000370966 SPATA31A7Q8IWB4 1347 aa12.65□□□□□ -0.38
DEPDC1-201ENST00000370966 DCTN3O75935 186 aa12.65□□□□□ -0.38
DEPDC1-201ENST00000370966 ZNF18P17022 549 aa12.65□□□□□ -0.38
DEPDC1-201ENST00000370966 SLC1A1P43005 524 aa12.65□□□□□ -0.38
DEPDC1-201ENST00000370966 TTLL4Q14679 1199 aa12.65□□□□□ -0.38
DEPDC1-201ENST00000370966 MMEL1Q495T6 779 aa12.65□□□□□ -0.38
DEPDC1-201ENST00000370966 FAM133BQ5BKY9 247 aaKnown RBP12.65□□□□□ -0.38
DEPDC1-201ENST00000370966 XKR3Q5GH77 459 aa12.65□□□□□ -0.38
DEPDC1-201ENST00000370966 TRIM68Q6AZZ1 485 aa12.65□□□□□ -0.38
DEPDC1-201ENST00000370966 GDAP1Q8TB36 358 aa12.65□□□□□ -0.38
DEPDC1-201ENST00000370966 LRRC1Q9BTT6 524 aa12.65□□□□□ -0.38
DEPDC1-201ENST00000370966 NBPF3Q9H094 633 aa12.65□□□□□ -0.38
DEPDC1-201ENST00000370966 CYP26B1Q9NR63 512 aa12.65□□□□□ -0.38
DEPDC1-201ENST00000370966 PPLO60437 1756 aa12.65□□□□□ -0.39
DEPDC1-201ENST00000370966 LPXNO60711 386 aa12.64□□□□□ -0.39
DEPDC1-201ENST00000370966 NAB2Q15742 525 aa12.64□□□□□ -0.39
DEPDC1-201ENST00000370966 KLHL38Q2WGJ6 581 aa12.64□□□□□ -0.39
DEPDC1-201ENST00000370966 INTS5Q6P9B9 1019 aaKnown RBP12.64□□□□□ -0.39
DEPDC1-201ENST00000370966 PASD1Q8IV76 773 aa12.64□□□□□ -0.39
DEPDC1-201ENST00000370966 FBXO41Q8TF61 875 aa12.64□□□□□ -0.39
DEPDC1-201ENST00000370966 FAM151AQ8WW52 585 aa12.64□□□□□ -0.39
DEPDC1-201ENST00000370966 FAF2Q96CS3 445 aa12.64□□□□□ -0.39
DEPDC1-201ENST00000370966 TMEM131LA2VDJ0 1609 aa12.64□□□□□ -0.39
DEPDC1-201ENST00000370966 EIF3DO15371 548 aaKnown RBP eCLIP12.64□□□□□ -0.39
DEPDC1-201ENST00000370966 GALCP54803 685 aa12.64□□□□□ -0.39
DEPDC1-201ENST00000370966 SESN3P58005 492 aa12.64□□□□□ -0.39
DEPDC1-201ENST00000370966 TADA2BQ86TJ2 420 aa12.64□□□□□ -0.39
DEPDC1-201ENST00000370966 MIPOL1Q8TD10 442 aa12.64□□□□□ -0.39
DEPDC1-201ENST00000370966 RNF25Q96BH1 459 aaPredicted RBP12.64□□□□□ -0.39
DEPDC1-201ENST00000370966 DDX56Q9NY93 547 aaKnown RBP12.64□□□□□ -0.39
DEPDC1-201ENST00000370966 CASP7P55210 303 aa12.64□□□□□ -0.39
DEPDC1-201ENST00000370966 CDO1Q16878 200 aa12.64□□□□□ -0.39
DEPDC1-201ENST00000370966 PPP6R3Q5H9R7 873 aaPredicted RBP12.64□□□□□ -0.39
DEPDC1-201ENST00000370966 KCNV1Q6PIU1 500 aa12.64□□□□□ -0.39
DEPDC1-201ENST00000370966 RAB44Q7Z6P3 723 aaPredicted RBP12.64□□□□□ -0.39
DEPDC1-201ENST00000370966 CLEC10AQ8IUN9 316 aa12.64□□□□□ -0.39
DEPDC1-201ENST00000370966 HSPH1Q92598 858 aa12.64□□□□□ -0.39
DEPDC1-201ENST00000370966 FAM49AQ9H0Q0 323 aaPredicted RBP12.64□□□□□ -0.39
DEPDC1-201ENST00000370966 L2HGDHQ9H9P8 463 aa12.64□□□□□ -0.39
DEPDC1-201ENST00000370966 JPH1Q9HDC5 661 aaPredicted RBP12.64□□□□□ -0.39
DEPDC1-201ENST00000370966 AMACRQ9UHK6 382 aa12.64□□□□□ -0.39
DEPDC1-201ENST00000370966 PLAGL2Q9UPG8 496 aa12.64□□□□□ -0.39
DEPDC1-201ENST00000370966 SPATA31A6Q5VVP1 1343 aa12.64□□□□□ -0.39
DEPDC1-201ENST00000370966 SDC4P31431 198 aa12.64□□□□□ -0.39
DEPDC1-201ENST00000370966 SNRPFP62306 86 aaKnown RBP12.64□□□□□ -0.39
DEPDC1-201ENST00000370966 THOC5Q13769 683 aaKnown RBP12.64□□□□□ -0.39
DEPDC1-201ENST00000370966 COG2Q14746 738 aa12.64□□□□□ -0.39
DEPDC1-201ENST00000370966 SEC23AQ15436 765 aa12.64□□□□□ -0.39
DEPDC1-201ENST00000370966 NBPF9Q3BBW0 867 aa12.64□□□□□ -0.39
DEPDC1-201ENST00000370966 CCNI2Q6ZMN8 369 aaPredicted RBP12.64□□□□□ -0.39
DEPDC1-201ENST00000370966 BEGAINQ9BUH8 593 aa12.64□□□□□ -0.39
DEPDC1-201ENST00000370966 TEX13BQ9BXU2 312 aa12.64□□□□□ -0.39
DEPDC1-201ENST00000370966 ADGRB2O60241 1585 aa12.63□□□□□ -0.39
DEPDC1-201ENST00000370966 ATP5HO75947 161 aa12.63□□□□□ -0.39
DEPDC1-201ENST00000370966 GUCY2CP25092 1073 aa12.63□□□□□ -0.39
DEPDC1-201ENST00000370966 SERPINB6P35237 376 aa12.63□□□□□ -0.39
DEPDC1-201ENST00000370966 STX1BP61266 288 aa12.63□□□□□ -0.39
DEPDC1-201ENST00000370966 PLCB4Q15147 1175 aa12.63□□□□□ -0.39
DEPDC1-201ENST00000370966 NTRK3Q16288 839 aa12.63□□□□□ -0.39
DEPDC1-201ENST00000370966 TRIM55Q9BYV6 548 aa12.63□□□□□ -0.39
DEPDC1-201ENST00000370966 RPAP3Q9H6T3 665 aaPredicted RBP12.63□□□□□ -0.39
DEPDC1-201ENST00000370966 SMYD2Q9NRG4 433 aa12.63□□□□□ -0.39
DEPDC1-201ENST00000370966 HSPBP1Q9NZL4 362 aa12.63□□□□□ -0.39
DEPDC1-201ENST00000370966 MAD2L2Q9UI95 211 aa12.63□□□□□ -0.39
DEPDC1-201ENST00000370966 CPSF3Q9UKF6 684 aaKnown RBP12.63□□□□□ -0.39
DEPDC1-201ENST00000370966 KIF3CO14782 793 aa12.63□□□□□ -0.39
DEPDC1-201ENST00000370966 ESRRAP11474 423 aaPredicted RBP12.63□□□□□ -0.39
DEPDC1-201ENST00000370966 PSMC1P62191 440 aaKnown RBP12.63□□□□□ -0.39
DEPDC1-201ENST00000370966 ARHGEF6Q15052 776 aa12.63□□□□□ -0.39
DEPDC1-201ENST00000370966 SMIM5Q71RC9 77 aa12.63□□□□□ -0.39
DEPDC1-201ENST00000370966 SRRM1Q8IYB3 904 aaKnown RBP12.63□□□□□ -0.39
DEPDC1-201ENST00000370966 RNF139Q8WU17 664 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms