RNA–Protein interactions for RNA: ENST00000370532.3

CDR1-201, Transcript of cerebellar degeneration related protein 1, humanhuman

APPRIS P1 BASIC

Gene CDR1, Length 2,467 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1-201ENST00000370532 SCAF8Q9UPN6 1271 aaKnown RBP4.85□□□□□ -1.63
CDR1-201ENST00000370532 CHMP2BQ9UQN3 213 aa4.85□□□□□ -1.63
CDR1-201ENST00000370532 HEY1Q9Y5J3 304 aa4.85□□□□□ -1.63
CDR1-201ENST00000370532 CYP46A1Q9Y6A2 500 aa4.85□□□□□ -1.63
CDR1-201ENST00000370532 MYH15Q9Y2K3 1946 aa4.85□□□□□ -1.63
CDR1-201ENST00000370532 PLXNA1Q9UIW2 1896 aa4.84□□□□□ -1.63
CDR1-201ENST00000370532 CTAGE9A4FU28 777 aa4.84□□□□□ -1.63
CDR1-201ENST00000370532 E7EWF7 191 aa4.84□□□□□ -1.63
CDR1-201ENST00000370532 BOLA2-SMG1P6H3BVE0 249 aa4.84□□□□□ -1.63
CDR1-201ENST00000370532 TPPPO94811 219 aa4.84□□□□□ -1.63
CDR1-201ENST00000370532 KRT14P02533 472 aa4.84□□□□□ -1.63
CDR1-201ENST00000370532 EPB41P11171 864 aaKnown RBP4.84□□□□□ -1.63
CDR1-201ENST00000370532 TOP1P11387 765 aaKnown RBP4.84□□□□□ -1.63
CDR1-201ENST00000370532 KIF5BP33176 963 aa4.84□□□□□ -1.63
CDR1-201ENST00000370532 UBASH3AP57075 661 aa4.84□□□□□ -1.63
CDR1-201ENST00000370532 HAND2P61296 217 aa4.84□□□□□ -1.63
CDR1-201ENST00000370532 AMPD2Q01433 879 aa4.84□□□□□ -1.63
CDR1-201ENST00000370532 PDE4BQ07343 736 aa4.84□□□□□ -1.63
CDR1-201ENST00000370532 VAC14Q08AM6 782 aa4.84□□□□□ -1.63
CDR1-201ENST00000370532 NNTQ13423 1086 aa4.84□□□□□ -1.63
CDR1-201ENST00000370532 ITGA7Q13683 1181 aa4.84□□□□□ -1.63
CDR1-201ENST00000370532 TUBB2AQ13885 445 aa4.84□□□□□ -1.63
CDR1-201ENST00000370532 COL9A3Q14050 684 aaPredicted RBP4.84□□□□□ -1.63
CDR1-201ENST00000370532 LBRQ14739 615 aaKnown RBP4.84□□□□□ -1.63
CDR1-201ENST00000370532 RCN1Q15293 331 aa4.84□□□□□ -1.63
CDR1-201ENST00000370532 NR6A1Q15406 480 aa4.84□□□□□ -1.63
CDR1-201ENST00000370532 SGSM1Q2NKQ1 1148 aa4.84□□□□□ -1.63
CDR1-201ENST00000370532 MAP7D1Q3KQU3 841 aa4.84□□□□□ -1.63
CDR1-201ENST00000370532 TKFCQ3LXA3 575 aa4.84□□□□□ -1.63
CDR1-201ENST00000370532 CCDC38Q502W7 563 aa4.84□□□□□ -1.63
CDR1-201ENST00000370532 THOC7Q6I9Y2 204 aaKnown RBP4.84□□□□□ -1.63
CDR1-201ENST00000370532 SLC2A7Q6PXP3 512 aa4.84□□□□□ -1.63
CDR1-201ENST00000370532 BLOC1S2Q6QNY1 142 aa4.84□□□□□ -1.63
CDR1-201ENST00000370532 PDILTQ8N807 584 aa4.84□□□□□ -1.63
CDR1-201ENST00000370532 ARRDC4Q8NCT1 418 aa4.84□□□□□ -1.63
CDR1-201ENST00000370532 AENQ8WTP8 325 aaKnown RBP4.84□□□□□ -1.63
CDR1-201ENST00000370532 HPS3Q969F9 1004 aa4.84□□□□□ -1.63
CDR1-201ENST00000370532 SEC16BQ96JE7 1060 aa4.84□□□□□ -1.63
CDR1-201ENST00000370532 MMS19Q96T76 1030 aa4.84□□□□□ -1.63
CDR1-201ENST00000370532 TUBB2BQ9BVA1 445 aa4.84□□□□□ -1.63
CDR1-201ENST00000370532 IRF2BPLQ9H1B7 796 aa4.84□□□□□ -1.63
CDR1-201ENST00000370532 DCP1AQ9NPI6 582 aaPredicted RBP4.84□□□□□ -1.63
CDR1-201ENST00000370532 PRDM9Q9NQV7 894 aa4.84□□□□□ -1.63
CDR1-201ENST00000370532 EIF4ENIF1Q9NRA8 985 aaKnown RBP4.84□□□□□ -1.63
CDR1-201ENST00000370532 ABCF3Q9NUQ8 709 aa4.84□□□□□ -1.63
CDR1-201ENST00000370532 DLGAP2Q9P1A6 1054 aa4.84□□□□□ -1.63
CDR1-201ENST00000370532 FZD1Q9UP38 647 aa4.84□□□□□ -1.63
CDR1-201ENST00000370532 TAF6LQ9Y6J9 622 aa4.84□□□□□ -1.63
CDR1-201ENST00000370532 ZMYM6O95789 1325 aa4.84□□□□□ -1.63
CDR1-201ENST00000370532 ITIH6Q6UXX5 1313 aa4.84□□□□□ -1.63
CDR1-201ENST00000370532 A0A1W2PQ67 120 aa4.84□□□□□ -1.64
CDR1-201ENST00000370532 MINDY4BA8MYZ0 360 aa4.84□□□□□ -1.64
CDR1-201ENST00000370532 USP17L12C9JPN9 530 aa4.84□□□□□ -1.64
CDR1-201ENST00000370532 USP17L21D6R901 530 aa4.84□□□□□ -1.64
CDR1-201ENST00000370532 H0YGN5 161 aa4.84□□□□□ -1.64
CDR1-201ENST00000370532 HRO43593 1189 aa4.84□□□□□ -1.64
CDR1-201ENST00000370532 STX10O60499 249 aa4.84□□□□□ -1.64
CDR1-201ENST00000370532 HNRNPCP07910 306 aaKnown RBP eCLIP4.84□□□□□ -1.64
CDR1-201ENST00000370532 CCDC166P0CW27 439 aa4.84□□□□□ -1.64
CDR1-201ENST00000370532 ZFXP17010 805 aaPredicted RBP4.84□□□□□ -1.64
CDR1-201ENST00000370532 GSTT1P30711 240 aa4.84□□□□□ -1.64
CDR1-201ENST00000370532 MDH1P40925 334 aaKnown RBP4.84□□□□□ -1.64
CDR1-201ENST00000370532 CCNFP41002 786 aa4.84□□□□□ -1.64
CDR1-201ENST00000370532 KCNJ2P63252 427 aa4.84□□□□□ -1.64
CDR1-201ENST00000370532 IGBP1P78318 339 aa4.84□□□□□ -1.64
CDR1-201ENST00000370532 MRPS35P82673 323 aaKnown RBP4.84□□□□□ -1.64
CDR1-201ENST00000370532 TBX2Q13207 712 aaPredicted RBP4.84□□□□□ -1.64
CDR1-201ENST00000370532 ABCB5Q2M3G0 1257 aa4.84□□□□□ -1.64
CDR1-201ENST00000370532 ADGRD1Q6QNK2 874 aa4.84□□□□□ -1.64
CDR1-201ENST00000370532 RAD9BQ6WBX8 426 aa4.84□□□□□ -1.64
CDR1-201ENST00000370532 LONP2Q86WA8 852 aa4.84□□□□□ -1.64
CDR1-201ENST00000370532 ZNF687Q8N1G0 1237 aa4.84□□□□□ -1.64
CDR1-201ENST00000370532 CCDC63Q8NA47 563 aa4.84□□□□□ -1.64
CDR1-201ENST00000370532 ENGASEQ8NFI3 743 aa4.84□□□□□ -1.64
CDR1-201ENST00000370532 DEPTORQ8TB45 409 aa4.84□□□□□ -1.64
CDR1-201ENST00000370532 SH3TC2Q8TF17 1288 aa4.84□□□□□ -1.64
CDR1-201ENST00000370532 TGFBRAP1Q8WUH2 860 aa4.84□□□□□ -1.64
CDR1-201ENST00000370532 UCMAQ8WVF2 138 aa4.84□□□□□ -1.64
CDR1-201ENST00000370532 CEP295NLQ96MC4 621 aa4.84□□□□□ -1.64
CDR1-201ENST00000370532 DNAJC18Q9H819 358 aa4.84□□□□□ -1.64
CDR1-201ENST00000370532 EPB41L4AQ9HCS5 686 aaPredicted RBP4.84□□□□□ -1.64
CDR1-201ENST00000370532 RBPJLQ9UBG7 517 aa4.84□□□□□ -1.64
CDR1-201ENST00000370532 ARPP21Q9UBL0 812 aaPredicted RBP4.84□□□□□ -1.64
CDR1-201ENST00000370532 ZMYND8Q9ULU4 1186 aaPredicted RBP4.84□□□□□ -1.64
CDR1-201ENST00000370532 GABRQQ9UN88 632 aa4.84□□□□□ -1.64
CDR1-201ENST00000370532 TMX2Q9Y320 296 aa4.84□□□□□ -1.64
CDR1-201ENST00000370532 NEDD4P46934 1319 aa4.83□□□□□ -1.64
CDR1-201ENST00000370532 HTR3EA5X5Y0 456 aa4.83□□□□□ -1.64
CDR1-201ENST00000370532 SRGAP2O75044 1071 aa4.83□□□□□ -1.64
CDR1-201ENST00000370532 TACC1O75410 805 aa4.83□□□□□ -1.64
CDR1-201ENST00000370532 CYP2C8P10632 490 aa4.83□□□□□ -1.64
CDR1-201ENST00000370532 PYGMP11217 842 aa4.83□□□□□ -1.64
CDR1-201ENST00000370532 PCP11498 1178 aaKnown RBP4.83□□□□□ -1.64
CDR1-201ENST00000370532 RPS6KB1P23443 525 aa4.83□□□□□ -1.64
CDR1-201ENST00000370532 MCM3P25205 808 aa4.83□□□□□ -1.64
CDR1-201ENST00000370532 PDE6CP51160 858 aa4.83□□□□□ -1.64
CDR1-201ENST00000370532 ALDH5A1P51649 535 aaPredicted RBP4.83□□□□□ -1.64
CDR1-201ENST00000370532 HMGCS2P54868 508 aa4.83□□□□□ -1.64
CDR1-201ENST00000370532 MRPS25P82663 173 aaKnown RBP4.83□□□□□ -1.64
CDR1-201ENST00000370532 SF3A3Q12874 501 aaKnown RBP eCLIP4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms