RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 A0A1W2PQ64 194 aa16.35■□□□□ 0.21
COL9A1-204ENST00000370496 A0A1W2PQD8 194 aa16.35■□□□□ 0.21
COL9A1-204ENST00000370496 MYMKA6NI61 221 aa16.35■□□□□ 0.21
COL9A1-204ENST00000370496 K7ENM7 598 aa16.35■□□□□ 0.21
COL9A1-204ENST00000370496 SLC16A4O15374 487 aa16.35■□□□□ 0.21
COL9A1-204ENST00000370496 CA3P07451 260 aa16.35■□□□□ 0.21
COL9A1-204ENST00000370496 AMPD3Q01432 767 aa16.35■□□□□ 0.21
COL9A1-204ENST00000370496 PRPF4BQ13523 1007 aaKnown RBP16.35■□□□□ 0.21
COL9A1-204ENST00000370496 ZNF697Q5TEC3 545 aa16.35■□□□□ 0.21
COL9A1-204ENST00000370496 SPIRE2Q8WWL2 714 aa16.35■□□□□ 0.21
COL9A1-204ENST00000370496 RAD9AQ99638 391 aa16.35■□□□□ 0.21
COL9A1-204ENST00000370496 CCDC113Q9H0I3 377 aa16.35■□□□□ 0.21
COL9A1-204ENST00000370496 TMEM161AQ9NX61 479 aa16.35■□□□□ 0.21
COL9A1-204ENST00000370496 ARHGAP28Q9P2N2 729 aa16.35■□□□□ 0.21
COL9A1-204ENST00000370496 INSL6Q9Y581 213 aa16.35■□□□□ 0.21
COL9A1-204ENST00000370496 H0YCG3 227 aa16.34■□□□□ 0.21
COL9A1-204ENST00000370496 SKIP12755 728 aa16.34■□□□□ 0.21
COL9A1-204ENST00000370496 IDEP14735 1019 aa16.34■□□□□ 0.21
COL9A1-204ENST00000370496 ARF4P18085 180 aaPredicted RBP16.34■□□□□ 0.21
COL9A1-204ENST00000370496 SYKP43405 635 aa16.34■□□□□ 0.21
COL9A1-204ENST00000370496 ZNF131P52739 623 aa16.34■□□□□ 0.21
COL9A1-204ENST00000370496 STRN3Q13033 797 aa16.34■□□□□ 0.21
COL9A1-204ENST00000370496 AMHR2Q16671 573 aa16.34■□□□□ 0.21
COL9A1-204ENST00000370496 FAM187BQ17R55 369 aa16.34■□□□□ 0.21
COL9A1-204ENST00000370496 ECHDC2Q86YB7 292 aa16.34■□□□□ 0.21
COL9A1-204ENST00000370496 STAMQ92783 540 aa16.34■□□□□ 0.21
COL9A1-204ENST00000370496 TRIM6Q9C030 488 aaPredicted RBP16.34■□□□□ 0.21
COL9A1-204ENST00000370496 FZD8Q9H461 694 aa16.34■□□□□ 0.21
COL9A1-204ENST00000370496 SLC28A3Q9HAS3 691 aa16.34■□□□□ 0.21
COL9A1-204ENST00000370496 FAM105AQ9NUU6 356 aa16.34■□□□□ 0.21
COL9A1-204ENST00000370496 NLRC5Q86WI3 1866 aa16.34■□□□□ 0.21
COL9A1-204ENST00000370496 KIAA1671Q9BY89 1806 aa16.33■□□□□ 0.2
COL9A1-204ENST00000370496 RALGAPA2Q2PPJ7 1873 aa16.33■□□□□ 0.2
COL9A1-204ENST00000370496 FNDC1Q4ZHG4 1894 aaPredicted RBP16.33■□□□□ 0.2
COL9A1-204ENST00000370496 TMEM265A0A087WTH1 108 aa16.33■□□□□ 0.2
COL9A1-204ENST00000370496 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.33■□□□□ 0.2
COL9A1-204ENST00000370496 A0A0U1RQF3 1178 aa16.33■□□□□ 0.2
COL9A1-204ENST00000370496 LCHNA4D1U4 455 aa16.33■□□□□ 0.2
COL9A1-204ENST00000370496 K7ERI5 159 aa16.33■□□□□ 0.2
COL9A1-204ENST00000370496 HOXA2O43364 376 aa16.33■□□□□ 0.2
COL9A1-204ENST00000370496 GAP43P17677 238 aa16.33■□□□□ 0.2
COL9A1-204ENST00000370496 HOXA11P31270 313 aaPredicted RBP16.33■□□□□ 0.2
COL9A1-204ENST00000370496 NDUFA8P51970 172 aa16.33■□□□□ 0.2
COL9A1-204ENST00000370496 ASIC1P78348 528 aa16.33■□□□□ 0.2
COL9A1-204ENST00000370496 HTRA4P83105 476 aaPredicted RBP16.33■□□□□ 0.2
COL9A1-204ENST00000370496 SFR1Q86XK3 245 aa16.33■□□□□ 0.2
COL9A1-204ENST00000370496 FAM178BQ8IXR5 827 aa16.33■□□□□ 0.2
COL9A1-204ENST00000370496 ABI1Q8IZP0 508 aa16.33■□□□□ 0.2
COL9A1-204ENST00000370496 GOLPH3LQ9H4A5 285 aa16.33■□□□□ 0.2
COL9A1-204ENST00000370496 ELAC1Q9H777 363 aaKnown RBP16.33■□□□□ 0.2
COL9A1-204ENST00000370496 KBTBD4Q9NVX7 518 aa16.33■□□□□ 0.2
COL9A1-204ENST00000370496 USP25Q9UHP3 1055 aa16.33■□□□□ 0.2
COL9A1-204ENST00000370496 HPSEQ9Y251 543 aa16.33■□□□□ 0.2
COL9A1-204ENST00000370496 COL4A4P53420 1690 aaPredicted RBP16.33■□□□□ 0.2
COL9A1-204ENST00000370496 ACKR2O00590 384 aa16.32■□□□□ 0.2
COL9A1-204ENST00000370496 N4BP3O15049 544 aa16.32■□□□□ 0.2
COL9A1-204ENST00000370496 TRAK2O60296 914 aa16.32■□□□□ 0.2
COL9A1-204ENST00000370496 DGKIO75912 1065 aa16.32■□□□□ 0.2
COL9A1-204ENST00000370496 NCKAP1LP55160 1127 aa16.32■□□□□ 0.2
COL9A1-204ENST00000370496 PAN2Q504Q3 1202 aaKnown RBP16.32■□□□□ 0.2
COL9A1-204ENST00000370496 GPR153Q6NV75 609 aa16.32■□□□□ 0.2
COL9A1-204ENST00000370496 SLC27A1Q6PCB7 646 aa16.32■□□□□ 0.2
COL9A1-204ENST00000370496 CDR2LQ86X02 465 aaPredicted RBP16.32■□□□□ 0.2
COL9A1-204ENST00000370496 CCDC65Q8IXS2 484 aa16.32■□□□□ 0.2
COL9A1-204ENST00000370496 SLC17A8Q8NDX2 589 aa16.32■□□□□ 0.2
COL9A1-204ENST00000370496 TMEM161BQ8NDZ6 487 aa16.32■□□□□ 0.2
COL9A1-204ENST00000370496 ADPGKQ9BRR6 497 aa16.32■□□□□ 0.2
COL9A1-204ENST00000370496 TRAIPQ9BWF2 469 aa16.32■□□□□ 0.2
COL9A1-204ENST00000370496 MRPL4Q9BYD3 311 aaKnown RBP16.32■□□□□ 0.2
COL9A1-204ENST00000370496 TMEM134Q9H6X4 195 aa16.32■□□□□ 0.2
COL9A1-204ENST00000370496 SEL1LQ9UBV2 794 aa16.32■□□□□ 0.2
COL9A1-204ENST00000370496 SERTAD1Q9UHV2 236 aa16.32■□□□□ 0.2
COL9A1-204ENST00000370496 PCDHB2Q9Y5E7 798 aa16.32■□□□□ 0.2
COL9A1-204ENST00000370496 FAM237AA0A1B0GTK4 181 aa16.31■□□□□ 0.2
COL9A1-204ENST00000370496 ACTN4O43707 911 aaKnown RBP16.31■□□□□ 0.2
COL9A1-204ENST00000370496 NPTXRO95502 500 aa16.31■□□□□ 0.2
COL9A1-204ENST00000370496 EDN1P05305 212 aa16.31■□□□□ 0.2
COL9A1-204ENST00000370496 SLFN14P0C7P3 912 aa16.31■□□□□ 0.2
COL9A1-204ENST00000370496 MAPTP10636 758 aaKnown RBP16.31■□□□□ 0.2
COL9A1-204ENST00000370496 FGFR1P11362 822 aa16.31■□□□□ 0.2
COL9A1-204ENST00000370496 SCP2P22307 547 aa16.31■□□□□ 0.2
COL9A1-204ENST00000370496 AFMP43652 599 aa16.31■□□□□ 0.2
COL9A1-204ENST00000370496 GATMP50440 423 aa16.31■□□□□ 0.2
COL9A1-204ENST00000370496 BTG3Q14201 252 aaPredicted RBP16.31■□□□□ 0.2
COL9A1-204ENST00000370496 LONRF3Q496Y0 759 aa16.31■□□□□ 0.2
COL9A1-204ENST00000370496 ATF7IP2Q5U623 682 aa16.31■□□□□ 0.2
COL9A1-204ENST00000370496 HAUS6Q7Z4H7 955 aa16.31■□□□□ 0.2
COL9A1-204ENST00000370496 APBB1IPQ7Z5R6 666 aaPredicted RBP16.31■□□□□ 0.2
COL9A1-204ENST00000370496 HACE1Q8IYU2 909 aa16.31■□□□□ 0.2
COL9A1-204ENST00000370496 DNAJC19Q96DA6 116 aa16.31■□□□□ 0.2
COL9A1-204ENST00000370496 PGBD4Q96DM1 585 aa16.31■□□□□ 0.2
COL9A1-204ENST00000370496 BICD1Q96G01 975 aa16.31■□□□□ 0.2
COL9A1-204ENST00000370496 NTPCRQ9BSD7 190 aaKnown RBP16.31■□□□□ 0.2
COL9A1-204ENST00000370496 EIF2AQ9BY44 585 aaKnown RBP16.31■□□□□ 0.2
COL9A1-204ENST00000370496 TRIM9Q9C026 710 aa16.31■□□□□ 0.2
COL9A1-204ENST00000370496 PDZD7Q9H5P4 517 aa16.31■□□□□ 0.2
COL9A1-204ENST00000370496 RC3H2Q9HBD1 1191 aaKnown RBP16.31■□□□□ 0.2
COL9A1-204ENST00000370496 PANK4Q9NVE7 773 aa16.31■□□□□ 0.2
COL9A1-204ENST00000370496 USP20Q9Y2K6 914 aa16.31■□□□□ 0.2
COL9A1-204ENST00000370496 A0A1B0GUA9 196 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms