RNA–Protein interactions for RNA: ENST00000369846.8

LCA5-201, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-201ENST00000369846 KDM7AQ6ZMT4 941 aa9.09□□□□□ -0.95
LCA5-201ENST00000369846 CLEC4FQ8N1N0 589 aa9.09□□□□□ -0.95
LCA5-201ENST00000369846 SSH3Q8TE77 659 aa9.09□□□□□ -0.95
LCA5-201ENST00000369846 ACAP3Q96P50 834 aa9.09□□□□□ -0.95
LCA5-201ENST00000369846 MRPL1Q9BYD6 325 aaKnown RBP9.09□□□□□ -0.95
LCA5-201ENST00000369846 USP44Q9H0E7 712 aa9.09□□□□□ -0.95
LCA5-201ENST00000369846 TMEM245Q9H330 911 aa9.09□□□□□ -0.95
LCA5-201ENST00000369846 TUBA8Q9NY65 449 aaPredicted RBP9.09□□□□□ -0.95
LCA5-201ENST00000369846 BLOC1S6Q9UL45 172 aa9.09□□□□□ -0.95
LCA5-201ENST00000369846 PNPLA6Q8IY17 1366 aa9.09□□□□□ -0.95
LCA5-201ENST00000369846 RIMS2Q9UQ26 1411 aa9.09□□□□□ -0.95
LCA5-201ENST00000369846 WASLO00401 505 aaPredicted RBP9.09□□□□□ -0.95
LCA5-201ENST00000369846 SEMA3EO15041 775 aa9.09□□□□□ -0.95
LCA5-201ENST00000369846 CDH16O75309 829 aa9.09□□□□□ -0.95
LCA5-201ENST00000369846 PLOD1Q02809 727 aaPredicted RBP9.09□□□□□ -0.95
LCA5-201ENST00000369846 YWHAHQ04917 246 aaPredicted RBP9.09□□□□□ -0.95
LCA5-201ENST00000369846 DMC1Q14565 340 aa9.09□□□□□ -0.95
LCA5-201ENST00000369846 C4orf50Q6ZRC1 276 aa9.09□□□□□ -0.95
LCA5-201ENST00000369846 LPCAT2Q7L5N7 544 aa9.09□□□□□ -0.95
LCA5-201ENST00000369846 NSL1Q96IY1 281 aa9.09□□□□□ -0.95
LCA5-201ENST00000369846 KIAA1024Q9UPX6 916 aa9.09□□□□□ -0.95
LCA5-201ENST00000369846 PITPNM2Q9BZ72 1349 aa9.09□□□□□ -0.95
LCA5-201ENST00000369846 TMEM191CA6NGB0 347 aa9.08□□□□□ -0.96
LCA5-201ENST00000369846 SEMA3DO95025 777 aa9.08□□□□□ -0.96
LCA5-201ENST00000369846 VIL1P09327 827 aaKnown RBP9.08□□□□□ -0.96
LCA5-201ENST00000369846 TMEM191BP0C7N4 346 aa9.08□□□□□ -0.96
LCA5-201ENST00000369846 PDIA2Q13087 525 aaKnown RBP9.08□□□□□ -0.96
LCA5-201ENST00000369846 PABPC4Q13310 644 aaKnown RBP eCLIP9.08□□□□□ -0.96
LCA5-201ENST00000369846 MKRN4PQ13434 485 aaPredicted RBP9.08□□□□□ -0.96
LCA5-201ENST00000369846 ANGPTL8Q6UXH0 198 aa9.08□□□□□ -0.96
LCA5-201ENST00000369846 LRIG3Q6UXM1 1119 aa9.08□□□□□ -0.96
LCA5-201ENST00000369846 CCDC81Q6ZN84 652 aa9.08□□□□□ -0.96
LCA5-201ENST00000369846 TMC4Q7Z404 712 aa9.08□□□□□ -0.96
LCA5-201ENST00000369846 FAM89AQ96GI7 184 aa9.08□□□□□ -0.96
LCA5-201ENST00000369846 FOXP1Q9H334 677 aaPredicted RBP9.08□□□□□ -0.96
LCA5-201ENST00000369846 COG4Q9H9E3 785 aa9.08□□□□□ -0.96
LCA5-201ENST00000369846 UBE2TQ9NPD8 197 aaPredicted RBP9.08□□□□□ -0.96
LCA5-201ENST00000369846 IL1RAPL1Q9NZN1 696 aa9.08□□□□□ -0.96
LCA5-201ENST00000369846 EFCAB6Q5THR3 1501 aa9.08□□□□□ -0.96
LCA5-201ENST00000369846 TNKSO95271 1327 aa9.08□□□□□ -0.96
LCA5-201ENST00000369846 KDM3AQ9Y4C1 1321 aa9.08□□□□□ -0.96
LCA5-201ENST00000369846 LMTK3Q96Q04 1460 aa9.08□□□□□ -0.96
LCA5-201ENST00000369846 IFT172Q9UG01 1749 aa9.08□□□□□ -0.96
LCA5-201ENST00000369846 GRID2IPA4D2P6 1211 aa9.08□□□□□ -0.96
LCA5-201ENST00000369846 MIF4GDA9UHW6 222 aaKnown RBP9.08□□□□□ -0.96
LCA5-201ENST00000369846 K7ENM7 598 aa9.08□□□□□ -0.96
LCA5-201ENST00000369846 ZSCAN9O15535 394 aaPredicted RBP9.08□□□□□ -0.96
LCA5-201ENST00000369846 RASSF9O75901 435 aa9.08□□□□□ -0.96
LCA5-201ENST00000369846 CCNHP51946 323 aaPredicted RBP9.08□□□□□ -0.96
LCA5-201ENST00000369846 MFAP3P55082 362 aa9.08□□□□□ -0.96
LCA5-201ENST00000369846 RASGRP2Q7LDG7 609 aa9.08□□□□□ -0.96
LCA5-201ENST00000369846 ZNF589Q86UQ0 364 aaPredicted RBP9.08□□□□□ -0.96
LCA5-201ENST00000369846 ZCCHC7Q8N3Z6 543 aaKnown RBP9.08□□□□□ -0.96
LCA5-201ENST00000369846 RPS6KC1Q96S38 1066 aa9.08□□□□□ -0.96
LCA5-201ENST00000369846 ATAD3AQ9NVI7 634 aa9.08□□□□□ -0.96
LCA5-201ENST00000369846 EURLQ9NYK6 297 aa9.08□□□□□ -0.96
LCA5-201ENST00000369846 INO80Q9ULG1 1556 aaPredicted RBP9.08□□□□□ -0.96
LCA5-201ENST00000369846 FAM187AA6NFU0 413 aa9.08□□□□□ -0.96
LCA5-201ENST00000369846 SPDYE2BA6NHP3 402 aa9.08□□□□□ -0.96
LCA5-201ENST00000369846 FAM47DPA6NHR8 397 aa9.08□□□□□ -0.96
LCA5-201ENST00000369846 ASNA1O43681 348 aa9.08□□□□□ -0.96
LCA5-201ENST00000369846 SPDYE6P0CI01 402 aa9.08□□□□□ -0.96
LCA5-201ENST00000369846 CHRNA3P32297 505 aa9.08□□□□□ -0.96
LCA5-201ENST00000369846 CCT3P49368 545 aaKnown RBP9.08□□□□□ -0.96
LCA5-201ENST00000369846 PLIN5Q00G26 463 aa9.08□□□□□ -0.96
LCA5-201ENST00000369846 KRT76Q01546 638 aa9.08□□□□□ -0.96
LCA5-201ENST00000369846 KLHL38Q2WGJ6 581 aa9.08□□□□□ -0.96
LCA5-201ENST00000369846 USH1GQ495M9 461 aa9.08□□□□□ -0.96
LCA5-201ENST00000369846 RHOT2Q8IXI1 618 aa9.08□□□□□ -0.96
LCA5-201ENST00000369846 KBTBD2Q8IY47 623 aa9.08□□□□□ -0.96
LCA5-201ENST00000369846 PBXIP1Q96AQ6 731 aa9.08□□□□□ -0.96
LCA5-201ENST00000369846 KLF6Q99612 283 aaPredicted RBP9.08□□□□□ -0.96
LCA5-201ENST00000369846 APOL6Q9BWW8 343 aa9.08□□□□□ -0.96
LCA5-201ENST00000369846 APPL1Q9UKG1 709 aa9.08□□□□□ -0.96
LCA5-201ENST00000369846 FNDC3AQ9Y2H6 1198 aaKnown RBP9.08□□□□□ -0.96
LCA5-201ENST00000369846 IVNS1ABPQ9Y6Y0 642 aa9.08□□□□□ -0.96
LCA5-201ENST00000369846 ADGRB3O60242 1522 aa9.08□□□□□ -0.96
LCA5-201ENST00000369846 NEMP1O14524 444 aa9.08□□□□□ -0.96
LCA5-201ENST00000369846 SASH3O75995 380 aa9.08□□□□□ -0.96
LCA5-201ENST00000369846 PRPF6O94906 941 aaKnown RBP9.08□□□□□ -0.96
LCA5-201ENST00000369846 STX3Q13277 289 aa9.08□□□□□ -0.96
LCA5-201ENST00000369846 TBC1D10BQ4KMP7 808 aaPredicted RBP9.08□□□□□ -0.96
LCA5-201ENST00000369846 FBXO31Q5XUX0 539 aaPredicted RBP9.08□□□□□ -0.96
LCA5-201ENST00000369846 ELMSAN1Q6PJG2 1045 aa9.08□□□□□ -0.96
LCA5-201ENST00000369846 KRT27Q7Z3Y8 459 aa9.08□□□□□ -0.96
LCA5-201ENST00000369846 C1orf54Q8WWF1 131 aa9.08□□□□□ -0.96
LCA5-201ENST00000369846 PRCCQ92733 491 aaPredicted RBP9.08□□□□□ -0.96
LCA5-201ENST00000369846 TTC25Q96NG3 672 aa9.08□□□□□ -0.96
LCA5-201ENST00000369846 BPIFA3Q9BQP9 254 aa9.08□□□□□ -0.96
LCA5-201ENST00000369846 GORASP1Q9BQQ3 440 aa9.08□□□□□ -0.96
LCA5-201ENST00000369846 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.08□□□□□ -0.96
LCA5-201ENST00000369846 C20orf96Q9NUD7 363 aaPredicted RBP9.08□□□□□ -0.96
LCA5-201ENST00000369846 SOX13Q9UN79 622 aa9.08□□□□□ -0.96
LCA5-201ENST00000369846 SRPRBQ9Y5M8 271 aaKnown RBP9.08□□□□□ -0.96
LCA5-201ENST00000369846 DEPDC5O75140 1603 aa9.07□□□□□ -0.96
LCA5-201ENST00000369846 A6NJR5 290 aa9.07□□□□□ -0.96
LCA5-201ENST00000369846 F8VZ95 297 aa9.07□□□□□ -0.96
LCA5-201ENST00000369846 HNRNPRO43390 633 aaKnown RBP9.07□□□□□ -0.96
LCA5-201ENST00000369846 CFBP00751 764 aa9.07□□□□□ -0.96
LCA5-201ENST00000369846 FXR1P51114 621 aaKnown RBP eCLIP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms