RNA–Protein interactions for RNA: ENST00000369747.7

UBE3D-203, Transcript of ubiquitin protein ligase E3D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3D, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-203ENST00000369747 PAK6Q9NQU5 681 aaPredicted RBP18.92■□□□□ 0.62
UBE3D-203ENST00000369747 OLFML3Q9NRN5 406 aa18.92■□□□□ 0.62
UBE3D-203ENST00000369747 FAM207AQ9NSI2 230 aaPredicted RBP18.92■□□□□ 0.62
UBE3D-203ENST00000369747 ODF2LQ9ULJ1 636 aa18.92■□□□□ 0.62
UBE3D-203ENST00000369747 FRMPD3Q5JV73 1810 aa18.92■□□□□ 0.62
UBE3D-203ENST00000369747 MAFO75444 373 aaPredicted RBP18.92■□□□□ 0.62
UBE3D-203ENST00000369747 PRPF6O94906 941 aaKnown RBP18.92■□□□□ 0.62
UBE3D-203ENST00000369747 FAM13AO94988 1023 aa18.92■□□□□ 0.62
UBE3D-203ENST00000369747 CCL5P13501 91 aa18.92■□□□□ 0.62
UBE3D-203ENST00000369747 GAP43P17677 238 aa18.92■□□□□ 0.62
UBE3D-203ENST00000369747 CST5P28325 142 aaPredicted RBP18.92■□□□□ 0.62
UBE3D-203ENST00000369747 HNRNPH3P31942 346 aaKnown RBP18.92■□□□□ 0.62
UBE3D-203ENST00000369747 PSEN2P49810 448 aa18.92■□□□□ 0.62
UBE3D-203ENST00000369747 ZNF131P52739 623 aa18.92■□□□□ 0.62
UBE3D-203ENST00000369747 CDK17Q00537 523 aa18.92■□□□□ 0.62
UBE3D-203ENST00000369747 KCNMA1Q12791 1236 aa18.92■□□□□ 0.62
UBE3D-203ENST00000369747 PPFIA1Q13136 1202 aa18.92■□□□□ 0.62
UBE3D-203ENST00000369747 MYCT1Q8N699 235 aa18.92■□□□□ 0.62
UBE3D-203ENST00000369747 TMEM143Q96AN5 459 aa18.92■□□□□ 0.62
UBE3D-203ENST00000369747 DEFB118Q96PH6 123 aa18.92■□□□□ 0.62
UBE3D-203ENST00000369747 RNF208Q9H0X6 261 aa18.92■□□□□ 0.62
UBE3D-203ENST00000369747 MMRN2Q9H8L6 949 aa18.92■□□□□ 0.62
UBE3D-203ENST00000369747 PARVGQ9HBI0 331 aa18.92■□□□□ 0.62
UBE3D-203ENST00000369747 SETD4Q9NVD3 440 aa18.92■□□□□ 0.62
UBE3D-203ENST00000369747 ZNHIT6Q9NWK9 470 aaKnown RBP18.92■□□□□ 0.62
UBE3D-203ENST00000369747 SMIM10L2AP0DMW4 78 aa18.91■□□□□ 0.62
UBE3D-203ENST00000369747 SMIM10L2BP0DMW5 78 aa18.91■□□□□ 0.62
UBE3D-203ENST00000369747 GRIK4Q16099 956 aa18.91■□□□□ 0.62
UBE3D-203ENST00000369747 ZNF484Q5JVG2 852 aa18.91■□□□□ 0.62
UBE3D-203ENST00000369747 MARCH8Q5T0T0 291 aa18.91■□□□□ 0.62
UBE3D-203ENST00000369747 RNF180Q86T96 592 aa18.91■□□□□ 0.62
UBE3D-203ENST00000369747 LRRC71Q8N4P6 559 aa18.91■□□□□ 0.62
UBE3D-203ENST00000369747 MCPH1Q8NEM0 835 aa18.91■□□□□ 0.62
UBE3D-203ENST00000369747 MTG1Q9BT17 334 aaPredicted RBP18.91■□□□□ 0.62
UBE3D-203ENST00000369747 NHEJ1Q9H9Q4 299 aaPredicted RBP18.91■□□□□ 0.62
UBE3D-203ENST00000369747 SUGCTQ9HAC7 445 aa18.91■□□□□ 0.62
UBE3D-203ENST00000369747 MRFAP1Q9Y605 127 aa18.91■□□□□ 0.62
UBE3D-203ENST00000369747 KAT6AQ92794 2004 aa18.91■□□□□ 0.62
UBE3D-203ENST00000369747 SCN10AQ9Y5Y9 1956 aa18.9■□□□□ 0.62
UBE3D-203ENST00000369747 PDXKO00764 312 aa18.9■□□□□ 0.62
UBE3D-203ENST00000369747 CETN3O15182 167 aa18.9■□□□□ 0.62
UBE3D-203ENST00000369747 KPNA6O60684 536 aa18.9■□□□□ 0.62
UBE3D-203ENST00000369747 C22orf31O95567 290 aa18.9■□□□□ 0.62
UBE3D-203ENST00000369747 NR2F2P24468 414 aa18.9■□□□□ 0.62
UBE3D-203ENST00000369747 RFC5P40937 340 aa18.9■□□□□ 0.62
UBE3D-203ENST00000369747 MKRN4PQ13434 485 aaPredicted RBP18.9■□□□□ 0.62
UBE3D-203ENST00000369747 HIC1Q14526 733 aa18.9■□□□□ 0.62
UBE3D-203ENST00000369747 ELF2Q15723 593 aa18.9■□□□□ 0.62
UBE3D-203ENST00000369747 ZNF569Q5MCW4 686 aa18.9■□□□□ 0.62
UBE3D-203ENST00000369747 LMBR1Q8WVP7 490 aa18.9■□□□□ 0.62
UBE3D-203ENST00000369747 PLAGL2Q9UPG8 496 aa18.9■□□□□ 0.62
UBE3D-203ENST00000369747 EVPLQ92817 2033 aa18.9■□□□□ 0.62
UBE3D-203ENST00000369747 ZEB2O60315 1214 aa18.9■□□□□ 0.62
UBE3D-203ENST00000369747 GCNT3O95395 438 aa18.9■□□□□ 0.62
UBE3D-203ENST00000369747 KLRC1P26715 233 aa18.9■□□□□ 0.62
UBE3D-203ENST00000369747 ODR4Q5SWX8 454 aa18.9■□□□□ 0.62
UBE3D-203ENST00000369747 CCDC170Q8IYT3 715 aa18.9■□□□□ 0.62
UBE3D-203ENST00000369747 PDCL2Q8N4E4 241 aa18.9■□□□□ 0.62
UBE3D-203ENST00000369747 PCSK9Q8NBP7 692 aaKnown RBP18.9■□□□□ 0.62
UBE3D-203ENST00000369747 BSNDQ8WZ55 320 aa18.9■□□□□ 0.62
UBE3D-203ENST00000369747 BAP1Q92560 729 aa18.9■□□□□ 0.62
UBE3D-203ENST00000369747 DRC1Q96MC2 740 aa18.9■□□□□ 0.62
UBE3D-203ENST00000369747 FIZ1Q96SL8 496 aa18.9■□□□□ 0.62
UBE3D-203ENST00000369747 TIPINQ9BVW5 301 aa18.9■□□□□ 0.62
UBE3D-203ENST00000369747 KATNAL1Q9BW62 490 aa18.9■□□□□ 0.62
UBE3D-203ENST00000369747 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.9■□□□□ 0.62
UBE3D-203ENST00000369747 IGKV6-21A0A0C4DH24 114 aa18.89■□□□□ 0.61
UBE3D-203ENST00000369747 CYLC1P35663 651 aaPredicted RBP18.89■□□□□ 0.61
UBE3D-203ENST00000369747 KCNA1Q09470 495 aa18.89■□□□□ 0.61
UBE3D-203ENST00000369747 METTL13Q8N6R0 699 aa18.89■□□□□ 0.61
UBE3D-203ENST00000369747 ZNF333Q96JL9 665 aa18.89■□□□□ 0.61
UBE3D-203ENST00000369747 CARD6Q9BX69 1037 aa18.89■□□□□ 0.61
UBE3D-203ENST00000369747 POLR3FQ9H1D9 316 aaPredicted RBP18.89■□□□□ 0.61
UBE3D-203ENST00000369747 TYW1Q9NV66 732 aaKnown RBP18.89■□□□□ 0.61
UBE3D-203ENST00000369747 HDAC6Q9UBN7 1215 aa18.89■□□□□ 0.61
UBE3D-203ENST00000369747 PPME1Q9Y570 386 aa18.89■□□□□ 0.61
UBE3D-203ENST00000369747 EIF3CLB5ME19 914 aaKnown RBP18.88■□□□□ 0.61
UBE3D-203ENST00000369747 CALUO43852 315 aaPredicted RBP18.88■□□□□ 0.61
UBE3D-203ENST00000369747 GJB1P08034 283 aa18.88■□□□□ 0.61
UBE3D-203ENST00000369747 NMT1P30419 496 aaKnown RBP18.88■□□□□ 0.61
UBE3D-203ENST00000369747 ACLYP53396 1101 aa18.88■□□□□ 0.61
UBE3D-203ENST00000369747 PEX3P56589 373 aa18.88■□□□□ 0.61
UBE3D-203ENST00000369747 PKN2Q16513 984 aaKnown RBP18.88■□□□□ 0.61
UBE3D-203ENST00000369747 ERCC6LQ2NKX8 1250 aa18.88■□□□□ 0.61
UBE3D-203ENST00000369747 NBPF20Q3BBV1 942 aa18.88■□□□□ 0.61
UBE3D-203ENST00000369747 EFCAB12Q6NXP0 572 aa18.88■□□□□ 0.61
UBE3D-203ENST00000369747 SLC35F6Q8N357 371 aa18.88■□□□□ 0.61
UBE3D-203ENST00000369747 NEK11Q8NG66 645 aa18.88■□□□□ 0.61
UBE3D-203ENST00000369747 KIFAP3Q92845 792 aa18.88■□□□□ 0.61
UBE3D-203ENST00000369747 EIF3CQ99613 913 aaKnown RBP18.88■□□□□ 0.61
UBE3D-203ENST00000369747 MYO1AQ9UBC5 1043 aa18.88■□□□□ 0.61
UBE3D-203ENST00000369747 COL1A2P08123 1366 aa18.88■□□□□ 0.61
UBE3D-203ENST00000369747 ZMYM2Q9UBW7 1377 aa18.88■□□□□ 0.61
UBE3D-203ENST00000369747 NRCAMQ92823 1304 aa18.88■□□□□ 0.61
UBE3D-203ENST00000369747 EIF3DO15371 548 aaKnown RBP eCLIP18.88■□□□□ 0.61
UBE3D-203ENST00000369747 NOL4O94818 638 aa18.88■□□□□ 0.61
UBE3D-203ENST00000369747 PLS3P13797 630 aa18.88■□□□□ 0.61
UBE3D-203ENST00000369747 ARL2P36404 184 aa18.88■□□□□ 0.61
UBE3D-203ENST00000369747 CLCN3P51790 818 aa18.88■□□□□ 0.61
UBE3D-203ENST00000369747 KRT83P78385 493 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms