RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 PTENP60484 403 aa26.1■■□□□ 1.77
SNX3-203ENST00000368979 ADAM17P78536 824 aa26.1■■□□□ 1.77
SNX3-203ENST00000368979 SYCP1Q15431 976 aa26.1■■□□□ 1.77
SNX3-203ENST00000368979 GNASQ5JWF2 1037 aa26.1■■□□□ 1.77
SNX3-203ENST00000368979 NFRKBQ6P4R8 1299 aa26.1■■□□□ 1.77
SNX3-203ENST00000368979 SLAIN1Q8ND83 568 aa26.1■■□□□ 1.77
SNX3-203ENST00000368979 SLC35C1Q96A29 364 aa26.1■■□□□ 1.77
SNX3-203ENST00000368979 NLRP4Q96MN2 994 aa26.1■■□□□ 1.77
SNX3-203ENST00000368979 EIF2AK3Q9NZJ5 1116 aaKnown RBP26.1■■□□□ 1.77
SNX3-203ENST00000368979 EVPLQ92817 2033 aa26.09■■□□□ 1.77
SNX3-203ENST00000368979 MSCO60682 206 aa26.09■■□□□ 1.77
SNX3-203ENST00000368979 GYPCP04921 128 aa26.09■■□□□ 1.77
SNX3-203ENST00000368979 KCNH2Q12809 1159 aa26.09■■□□□ 1.77
SNX3-203ENST00000368979 TRIM14Q14142 442 aa26.09■■□□□ 1.77
SNX3-203ENST00000368979 IFNLR1Q8IU57 520 aaPredicted RBP26.09■■□□□ 1.77
SNX3-203ENST00000368979 MTG1Q9BT17 334 aaPredicted RBP26.09■■□□□ 1.77
SNX3-203ENST00000368979 AKT3Q9Y243 479 aa26.09■■□□□ 1.77
SNX3-203ENST00000368979 SIK3Q9Y2K2 1263 aa26.09■■□□□ 1.77
SNX3-203ENST00000368979 ZKSCAN5Q9Y2L8 839 aa26.09■■□□□ 1.77
SNX3-203ENST00000368979 SFPQP23246 707 aaKnown RBP eCLIP26.09■■□□□ 1.77
SNX3-203ENST00000368979 CST5P28325 142 aaPredicted RBP26.09■■□□□ 1.77
SNX3-203ENST00000368979 HOXC8P31273 242 aa26.09■■□□□ 1.77
SNX3-203ENST00000368979 CHMP4BP1P59074 171 aa26.09■■□□□ 1.77
SNX3-203ENST00000368979 LRMPQ12912 555 aa26.09■■□□□ 1.77
SNX3-203ENST00000368979 HIC1Q14526 733 aa26.09■■□□□ 1.77
SNX3-203ENST00000368979 ZPBP2Q6X784 338 aa26.09■■□□□ 1.77
SNX3-203ENST00000368979 KIAA0319LQ8IZA0 1049 aa26.09■■□□□ 1.77
SNX3-203ENST00000368979 ZSWIM2Q8NEG5 633 aa26.09■■□□□ 1.77
SNX3-203ENST00000368979 KLHDC9Q8NEP7 349 aa26.09■■□□□ 1.77
SNX3-203ENST00000368979 FBXL18Q96ME1 805 aa26.09■■□□□ 1.77
SNX3-203ENST00000368979 MAP7D2Q96T17 732 aa26.09■■□□□ 1.77
SNX3-203ENST00000368979 DDX20Q9UHI6 824 aaKnown RBP26.09■■□□□ 1.77
SNX3-203ENST00000368979 ZEB2O60315 1214 aa26.08■■□□□ 1.77
SNX3-203ENST00000368979 AFPP02771 609 aaKnown RBP26.08■■□□□ 1.77
SNX3-203ENST00000368979 PRKCBP05771 671 aa26.08■■□□□ 1.77
SNX3-203ENST00000368979 MCCD1P59942 119 aaPredicted RBP26.08■■□□□ 1.77
SNX3-203ENST00000368979 RBL2Q08999 1139 aa26.08■■□□□ 1.77
SNX3-203ENST00000368979 MAPK6Q16659 721 aa26.08■■□□□ 1.77
SNX3-203ENST00000368979 DCAF17Q5H9S7 520 aaPredicted RBP26.08■■□□□ 1.77
SNX3-203ENST00000368979 PPFIBP1Q86W92 1011 aa26.08■■□□□ 1.77
SNX3-203ENST00000368979 TC2NQ8N9U0 490 aa26.08■■□□□ 1.77
SNX3-203ENST00000368979 PPP1R13LQ8WUF5 828 aa26.08■■□□□ 1.77
SNX3-203ENST00000368979 POMGNT1Q8WZA1 660 aa26.08■■□□□ 1.77
SNX3-203ENST00000368979 TARS2Q9BW92 718 aaKnown RBP26.08■■□□□ 1.77
SNX3-203ENST00000368979 FZD8Q9H461 694 aa26.08■■□□□ 1.77
SNX3-203ENST00000368979 IFT122Q9HBG6 1241 aa26.08■■□□□ 1.77
SNX3-203ENST00000368979 TSKSQ9UJT2 592 aa26.08■■□□□ 1.77
SNX3-203ENST00000368979 USP20Q9Y2K6 914 aa26.08■■□□□ 1.77
SNX3-203ENST00000368979 VTNP04004 478 aa26.07■■□□□ 1.76
SNX3-203ENST00000368979 PHKA2P46019 1235 aa26.07■■□□□ 1.76
SNX3-203ENST00000368979 KLK7P49862 253 aa26.07■■□□□ 1.76
SNX3-203ENST00000368979 MBTD1Q05BQ5 628 aa26.07■■□□□ 1.76
SNX3-203ENST00000368979 BFSP1Q12934 665 aa26.07■■□□□ 1.76
SNX3-203ENST00000368979 INTS8Q75QN2 995 aaKnown RBP26.07■■□□□ 1.76
SNX3-203ENST00000368979 ZSCAN30Q86W11 494 aa26.07■■□□□ 1.76
SNX3-203ENST00000368979 CCDC155Q8N6L0 562 aa26.07■■□□□ 1.76
SNX3-203ENST00000368979 ZNF668Q96K58 619 aaPredicted RBP26.07■■□□□ 1.76
SNX3-203ENST00000368979 MRPL4Q9BYD3 311 aaKnown RBP26.07■■□□□ 1.76
SNX3-203ENST00000368979 SCN10AQ9Y5Y9 1956 aa26.06■■□□□ 1.76
SNX3-203ENST00000368979 KAT6AQ92794 2004 aa26.06■■□□□ 1.76
SNX3-203ENST00000368979 SMIM35A0A1B0GVV1 85 aa26.06■■□□□ 1.76
SNX3-203ENST00000368979 KIAA0391O15091 583 aaKnown RBP26.06■■□□□ 1.76
SNX3-203ENST00000368979 INHAP05111 366 aa26.06■■□□□ 1.76
SNX3-203ENST00000368979 GOLGA8FQ08AF8 430 aa26.06■■□□□ 1.76
SNX3-203ENST00000368979 GOLGA8DPQ0D2H9 430 aa26.06■■□□□ 1.76
SNX3-203ENST00000368979 FIGNQ5HY92 759 aa26.06■■□□□ 1.76
SNX3-203ENST00000368979 SLFN12LQ6IEE8 588 aa26.06■■□□□ 1.76
SNX3-203ENST00000368979 CCSAPQ6IQ19 270 aaPredicted RBP26.06■■□□□ 1.76
SNX3-203ENST00000368979 RDH13Q8NBN7 331 aa26.06■■□□□ 1.76
SNX3-203ENST00000368979 SAAL1Q96ER3 474 aa26.06■■□□□ 1.76
SNX3-203ENST00000368979 BEGAINQ9BUH8 593 aa26.06■■□□□ 1.76
SNX3-203ENST00000368979 TTYH3Q9C0H2 523 aa26.06■■□□□ 1.76
SNX3-203ENST00000368979 HDAC6Q9UBN7 1215 aa26.06■■□□□ 1.76
SNX3-203ENST00000368979 A0A087WZ62 844 aa26.05■■□□□ 1.76
SNX3-203ENST00000368979 GOLGA8IPA6NC78 632 aa26.05■■□□□ 1.76
SNX3-203ENST00000368979 GOLGA8JA6NMD2 632 aa26.05■■□□□ 1.76
SNX3-203ENST00000368979 AKR1B15C9JRZ8 316 aaPredicted RBP26.05■■□□□ 1.76
SNX3-203ENST00000368979 MFAP3LO75121 409 aa26.05■■□□□ 1.76
SNX3-203ENST00000368979 ADRB2P07550 413 aa26.05■■□□□ 1.76
SNX3-203ENST00000368979 CASP14P31944 242 aa26.05■■□□□ 1.76
SNX3-203ENST00000368979 FXR1P51114 621 aaKnown RBP eCLIP26.05■■□□□ 1.76
SNX3-203ENST00000368979 GPC3P51654 580 aa26.05■■□□□ 1.76
SNX3-203ENST00000368979 CCZ1BP86790 482 aa26.05■■□□□ 1.76
SNX3-203ENST00000368979 CCZ1P86791 482 aaPredicted RBP26.05■■□□□ 1.76
SNX3-203ENST00000368979 KCNMA1Q12791 1236 aa26.05■■□□□ 1.76
SNX3-203ENST00000368979 SNRNP35Q16560 246 aaKnown RBP26.05■■□□□ 1.76
SNX3-203ENST00000368979 TCERG1LQ5VWI1 586 aa26.05■■□□□ 1.76
SNX3-203ENST00000368979 CXCL17Q6UXB2 119 aa26.05■■□□□ 1.76
SNX3-203ENST00000368979 GPD1LQ8N335 351 aa26.05■■□□□ 1.76
SNX3-203ENST00000368979 FDXACB1Q9BRP7 624 aaPredicted RBP26.05■■□□□ 1.76
SNX3-203ENST00000368979 NUP58Q9BVL2 599 aa26.05■■□□□ 1.76
SNX3-203ENST00000368979 HAPLN2Q9GZV7 340 aa26.05■■□□□ 1.76
SNX3-203ENST00000368979 MINDY3Q9H8M7 445 aa26.05■■□□□ 1.76
SNX3-203ENST00000368979 TRIM17Q9Y577 477 aa26.05■■□□□ 1.76
SNX3-203ENST00000368979 PTCH2Q9Y6C5 1203 aa26.05■■□□□ 1.76
SNX3-203ENST00000368979 C17orf102A2RUQ5 167 aa26.04■■□□□ 1.76
SNX3-203ENST00000368979 TTLL13PA6NNM8 815 aa26.04■■□□□ 1.76
SNX3-203ENST00000368979 ACKR2O00590 384 aa26.04■■□□□ 1.76
SNX3-203ENST00000368979 CYP2C9P11712 490 aa26.04■■□□□ 1.76
SNX3-203ENST00000368979 KRT13P13646 458 aa26.04■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms