RNA–Protein interactions for RNA: ENST00000367621.1

VTA1-201, Transcript of vesicle trafficking 1, humanhuman

TSL 5 BASIC

Gene VTA1, Length 1,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-201ENST00000367621 CCND3P30281 292 aaPredicted RBP10.42□□□□□ -0.74
VTA1-201ENST00000367621 ADSSP30520 456 aa10.42□□□□□ -0.74
VTA1-201ENST00000367621 NAMPTP43490 491 aa10.42□□□□□ -0.74
VTA1-201ENST00000367621 CASP4P49662 377 aa10.42□□□□□ -0.74
VTA1-201ENST00000367621 SMTNP53814 917 aa10.42□□□□□ -0.74
VTA1-201ENST00000367621 GJA9P57773 515 aa10.42□□□□□ -0.74
VTA1-201ENST00000367621 MCCD1P59942 119 aaPredicted RBP10.42□□□□□ -0.74
VTA1-201ENST00000367621 BEX3Q00994 111 aa10.42□□□□□ -0.74
VTA1-201ENST00000367621 TBC1D8BQ0IIM8 1120 aa10.42□□□□□ -0.74
VTA1-201ENST00000367621 CAPSQ13938 189 aa10.42□□□□□ -0.74
VTA1-201ENST00000367621 IER5Q5VY09 327 aa10.42□□□□□ -0.74
VTA1-201ENST00000367621 TRIM67Q6ZTA4 783 aa10.42□□□□□ -0.74
VTA1-201ENST00000367621 SLC9A9Q8IVB4 645 aa10.42□□□□□ -0.74
VTA1-201ENST00000367621 TRIM59Q8IWR1 403 aa10.42□□□□□ -0.74
VTA1-201ENST00000367621 C12orf56Q8IXR9 622 aa10.42□□□□□ -0.74
VTA1-201ENST00000367621 LRRC71Q8N4P6 559 aa10.42□□□□□ -0.74
VTA1-201ENST00000367621 HVCN1Q96D96 273 aa10.42□□□□□ -0.74
VTA1-201ENST00000367621 CTAGE1Q96RT6 745 aa10.42□□□□□ -0.74
VTA1-201ENST00000367621 TUBGCP2Q9BSJ2 902 aa10.42□□□□□ -0.74
VTA1-201ENST00000367621 GBP3Q9H0R5 595 aa10.42□□□□□ -0.74
VTA1-201ENST00000367621 VPS16Q9H269 839 aa10.42□□□□□ -0.74
VTA1-201ENST00000367621 COL1A2P08123 1366 aa10.41□□□□□ -0.74
VTA1-201ENST00000367621 N4BP3O15049 544 aa10.41□□□□□ -0.74
VTA1-201ENST00000367621 CETN3O15182 167 aa10.41□□□□□ -0.74
VTA1-201ENST00000367621 SLC16A3O15427 465 aaKnown RBP10.41□□□□□ -0.74
VTA1-201ENST00000367621 GAS2O43903 313 aaKnown RBP10.41□□□□□ -0.74
VTA1-201ENST00000367621 ADCY3O60266 1144 aa10.41□□□□□ -0.74
VTA1-201ENST00000367621 ADAMTS4O75173 837 aa10.41□□□□□ -0.74
VTA1-201ENST00000367621 FGFR1OPO95684 399 aaKnown RBP10.41□□□□□ -0.74
VTA1-201ENST00000367621 GNRH1P01148 92 aa10.41□□□□□ -0.74
VTA1-201ENST00000367621 GJB1P08034 283 aa10.41□□□□□ -0.74
VTA1-201ENST00000367621 NR2F2P24468 414 aa10.41□□□□□ -0.74
VTA1-201ENST00000367621 KLRC1P26715 233 aa10.41□□□□□ -0.74
VTA1-201ENST00000367621 HOXD10P28358 340 aa10.41□□□□□ -0.74
VTA1-201ENST00000367621 HOXC8P31273 242 aa10.41□□□□□ -0.74
VTA1-201ENST00000367621 ADAM17P78536 824 aa10.41□□□□□ -0.74
VTA1-201ENST00000367621 PURAQ00577 322 aaKnown RBP10.41□□□□□ -0.74
VTA1-201ENST00000367621 LAMTOR4Q0VGL1 99 aa10.41□□□□□ -0.74
VTA1-201ENST00000367621 MYBPC2Q14324 1141 aa10.41□□□□□ -0.74
VTA1-201ENST00000367621 ARID5BQ14865 1188 aa10.41□□□□□ -0.74
VTA1-201ENST00000367621 FSCN1Q16658 493 aaKnown RBP10.41□□□□□ -0.74
VTA1-201ENST00000367621 HS1BP3Q53T59 392 aa10.41□□□□□ -0.74
VTA1-201ENST00000367621 CEP135Q66GS9 1140 aa10.41□□□□□ -0.74
VTA1-201ENST00000367621 CDCA2Q69YH5 1023 aaPredicted RBP10.41□□□□□ -0.74
VTA1-201ENST00000367621 CCSAPQ6IQ19 270 aaPredicted RBP10.41□□□□□ -0.74
VTA1-201ENST00000367621 MTHFD1LQ6UB35 978 aa10.41□□□□□ -0.74
VTA1-201ENST00000367621 STXBP4Q6ZWJ1 553 aa10.41□□□□□ -0.74
VTA1-201ENST00000367621 CCDC186Q7Z3E2 898 aa10.41□□□□□ -0.74
VTA1-201ENST00000367621 FAM114A1Q8IWE2 563 aa10.41□□□□□ -0.74
VTA1-201ENST00000367621 EXOC8Q8IYI6 725 aa10.41□□□□□ -0.74
VTA1-201ENST00000367621 ZSWIM2Q8NEG5 633 aa10.41□□□□□ -0.74
VTA1-201ENST00000367621 PXYLP1Q8TE99 480 aa10.41□□□□□ -0.74
VTA1-201ENST00000367621 ZNF775Q96BV0 537 aaPredicted RBP10.41□□□□□ -0.74
VTA1-201ENST00000367621 IFT74Q96LB3 600 aa10.41□□□□□ -0.74
VTA1-201ENST00000367621 CBWD1Q9BRT8 395 aa10.41□□□□□ -0.74
VTA1-201ENST00000367621 CCDC113Q9H0I3 377 aa10.41□□□□□ -0.74
VTA1-201ENST00000367621 AP5M1Q9H0R1 490 aa10.41□□□□□ -0.74
VTA1-201ENST00000367621 KCNF1Q9H3M0 494 aa10.41□□□□□ -0.74
VTA1-201ENST00000367621 TMEM206Q9H813 350 aa10.41□□□□□ -0.74
VTA1-201ENST00000367621 SUGCTQ9HAC7 445 aa10.41□□□□□ -0.74
VTA1-201ENST00000367621 SUCLA2Q9P2R7 463 aaPredicted RBP10.41□□□□□ -0.74
VTA1-201ENST00000367621 ZNF215Q9UL58 517 aaPredicted RBP10.41□□□□□ -0.74
VTA1-201ENST00000367621 MBLAC1A4D2B0 266 aaPredicted RBP10.4□□□□□ -0.74
VTA1-201ENST00000367621 MAGEB2O15479 319 aa10.4□□□□□ -0.74
VTA1-201ENST00000367621 GNA14O95837 355 aa10.4□□□□□ -0.74
VTA1-201ENST00000367621 PIGRP01833 764 aa10.4□□□□□ -0.74
VTA1-201ENST00000367621 HMGCRP04035 888 aa10.4□□□□□ -0.74
VTA1-201ENST00000367621 MYL3P08590 195 aa10.4□□□□□ -0.74
VTA1-201ENST00000367621 SMIM10L2AP0DMW4 78 aa10.4□□□□□ -0.74
VTA1-201ENST00000367621 SMIM10L2BP0DMW5 78 aa10.4□□□□□ -0.74
VTA1-201ENST00000367621 CPT1AP50416 773 aa10.4□□□□□ -0.74
VTA1-201ENST00000367621 CLCN3P51790 818 aa10.4□□□□□ -0.74
VTA1-201ENST00000367621 SNRPFP62306 86 aaKnown RBP10.4□□□□□ -0.74
VTA1-201ENST00000367621 IGBP1P78318 339 aa10.4□□□□□ -0.74
VTA1-201ENST00000367621 PPFIA1Q13136 1202 aa10.4□□□□□ -0.74
VTA1-201ENST00000367621 GRIK4Q16099 956 aa10.4□□□□□ -0.74
VTA1-201ENST00000367621 VWA3BQ502W6 1294 aa10.4□□□□□ -0.74
VTA1-201ENST00000367621 EFCAB12Q6NXP0 572 aa10.4□□□□□ -0.74
VTA1-201ENST00000367621 ARMCX5Q6P1M9 558 aa10.4□□□□□ -0.74
VTA1-201ENST00000367621 TMC6Q7Z403 805 aa10.4□□□□□ -0.74
VTA1-201ENST00000367621 FRMD5Q7Z6J6 570 aa10.4□□□□□ -0.74
VTA1-201ENST00000367621 KIAA0319LQ8IZA0 1049 aa10.4□□□□□ -0.74
VTA1-201ENST00000367621 KLHDC9Q8NEP7 349 aa10.4□□□□□ -0.74
VTA1-201ENST00000367621 GOLGA5Q8TBA6 731 aa10.4□□□□□ -0.74
VTA1-201ENST00000367621 PPP1R13LQ8WUF5 828 aa10.4□□□□□ -0.74
VTA1-201ENST00000367621 TCP11Q8WWU5 503 aa10.4□□□□□ -0.74
VTA1-201ENST00000367621 ERO1AQ96HE7 468 aa10.4□□□□□ -0.74
VTA1-201ENST00000367621 JPH2Q9BR39 696 aaPredicted RBP10.4□□□□□ -0.74
VTA1-201ENST00000367621 HAPLN2Q9GZV7 340 aa10.4□□□□□ -0.74
VTA1-201ENST00000367621 KDM4CQ9H3R0 1056 aa10.4□□□□□ -0.74
VTA1-201ENST00000367621 TMEM134Q9H6X4 195 aa10.4□□□□□ -0.74
VTA1-201ENST00000367621 SETD4Q9NVD3 440 aa10.4□□□□□ -0.74
VTA1-201ENST00000367621 CGNQ9P2M7 1197 aaKnown RBP10.4□□□□□ -0.74
VTA1-201ENST00000367621 MAGEC2Q9UBF1 373 aaPredicted RBP10.4□□□□□ -0.74
VTA1-201ENST00000367621 KCNG1Q9UIX4 513 aa10.4□□□□□ -0.74
VTA1-201ENST00000367621 USP20Q9Y2K6 914 aa10.4□□□□□ -0.74
VTA1-201ENST00000367621 STYXL1Q9Y6J8 313 aa10.4□□□□□ -0.74
VTA1-201ENST00000367621 A0A1W2PQC6 194 aa10.39□□□□□ -0.75
VTA1-201ENST00000367621 RRN3P2A6NIE6 340 aa10.39□□□□□ -0.75
VTA1-201ENST00000367621 H0YCG3 227 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms