RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 OLA1Q9NTK5 396 aaKnown RBP12.39□□□□□ -0.43
SYNE1-204ENST00000367248 KCND2Q9NZV8 630 aa12.39□□□□□ -0.43
SYNE1-204ENST00000367248 DDTLA6NHG4 134 aaPredicted RBP12.39□□□□□ -0.43
SYNE1-204ENST00000367248 DCDC2CA8MYV0 355 aa12.39□□□□□ -0.43
SYNE1-204ENST00000367248 KYAT1Q16773 422 aa12.39□□□□□ -0.43
SYNE1-204ENST00000367248 FIS1Q9Y3D6 152 aa12.39□□□□□ -0.43
SYNE1-204ENST00000367248 CIB2O75838 187 aa12.39□□□□□ -0.43
SYNE1-204ENST00000367248 CALB1P05937 261 aa12.39□□□□□ -0.43
SYNE1-204ENST00000367248 CYP2C9P11712 490 aa12.39□□□□□ -0.43
SYNE1-204ENST00000367248 RGS2P41220 211 aa12.39□□□□□ -0.43
SYNE1-204ENST00000367248 BASP1P80723 227 aaKnown RBP12.39□□□□□ -0.43
SYNE1-204ENST00000367248 SMAD1Q15797 465 aaKnown RBP12.39□□□□□ -0.43
SYNE1-204ENST00000367248 TAAR1Q96RJ0 339 aa12.39□□□□□ -0.43
SYNE1-204ENST00000367248 TRIM56Q9BRZ2 755 aaKnown RBP12.39□□□□□ -0.43
SYNE1-204ENST00000367248 KATNAL1Q9BW62 490 aa12.39□□□□□ -0.43
SYNE1-204ENST00000367248 PPME1Q9Y570 386 aa12.39□□□□□ -0.43
SYNE1-204ENST00000367248 TFDP2Q14188 446 aa12.39□□□□□ -0.43
SYNE1-204ENST00000367248 DRAP1Q14919 205 aaPredicted RBP12.39□□□□□ -0.43
SYNE1-204ENST00000367248 TRIP13Q15645 432 aaPredicted RBP12.39□□□□□ -0.43
SYNE1-204ENST00000367248 IER5Q5VY09 327 aa12.39□□□□□ -0.43
SYNE1-204ENST00000367248 GPRASP2Q96D09 838 aa12.39□□□□□ -0.43
SYNE1-204ENST00000367248 RILPQ96NA2 401 aa12.39□□□□□ -0.43
SYNE1-204ENST00000367248 STRIP2Q9ULQ0 834 aa12.39□□□□□ -0.43
SYNE1-204ENST00000367248 CXCR5P32302 372 aa12.39□□□□□ -0.43
SYNE1-204ENST00000367248 DUOXA2Q1HG44 320 aa12.39□□□□□ -0.43
SYNE1-204ENST00000367248 CDR2LQ86X02 465 aaPredicted RBP12.39□□□□□ -0.43
SYNE1-204ENST00000367248 ADSSL1Q8N142 457 aa12.39□□□□□ -0.43
SYNE1-204ENST00000367248 EDEM3Q9BZQ6 932 aa12.39□□□□□ -0.43
SYNE1-204ENST00000367248 KCNH7Q9NS40 1196 aa12.39□□□□□ -0.43
SYNE1-204ENST00000367248 PCDHB7Q9Y5E2 793 aa12.39□□□□□ -0.43
SYNE1-204ENST00000367248 FAM205AQ6ZU69 1335 aa12.39□□□□□ -0.43
SYNE1-204ENST00000367248 SLC26A4O43511 780 aa12.39□□□□□ -0.43
SYNE1-204ENST00000367248 GARSP41250 739 aaKnown RBP12.39□□□□□ -0.43
SYNE1-204ENST00000367248 USP49Q70CQ1 688 aa12.39□□□□□ -0.43
SYNE1-204ENST00000367248 ENOSF1Q7L5Y1 443 aa12.39□□□□□ -0.43
SYNE1-204ENST00000367248 LRRIQ1Q96JM4 1722 aa12.39□□□□□ -0.43
SYNE1-204ENST00000367248 EPB41L5Q9HCM4 733 aa12.39□□□□□ -0.43
SYNE1-204ENST00000367248 ABHD10Q9NUJ1 306 aa12.39□□□□□ -0.43
SYNE1-204ENST00000367248 MAP3K20Q9NYL2 800 aaKnown RBP12.39□□□□□ -0.43
SYNE1-204ENST00000367248 EMSYQ7Z589 1322 aa12.39□□□□□ -0.43
SYNE1-204ENST00000367248 ZWINTO95229 277 aa12.38□□□□□ -0.43
SYNE1-204ENST00000367248 S100BP04271 92 aaPredicted RBP12.38□□□□□ -0.43
SYNE1-204ENST00000367248 SDC4P31431 198 aa12.38□□□□□ -0.43
SYNE1-204ENST00000367248 MXD4Q14582 209 aaPredicted RBP12.38□□□□□ -0.43
SYNE1-204ENST00000367248 EMC2Q15006 297 aa12.38□□□□□ -0.43
SYNE1-204ENST00000367248 MMTAG2Q9BU76 263 aaKnown RBP12.38□□□□□ -0.43
SYNE1-204ENST00000367248 MOV10L1Q9BXT6 1211 aaKnown RBP12.38□□□□□ -0.43
SYNE1-204ENST00000367248 TMEM60Q9H2L4 133 aa12.38□□□□□ -0.43
SYNE1-204ENST00000367248 ANAPC7Q9UJX3 599 aa12.38□□□□□ -0.43
SYNE1-204ENST00000367248 SALL1Q9NSC2 1324 aa12.38□□□□□ -0.43
SYNE1-204ENST00000367248 TEX33O43247 280 aa12.38□□□□□ -0.43
SYNE1-204ENST00000367248 ICAM1P05362 532 aa12.38□□□□□ -0.43
SYNE1-204ENST00000367248 TROVE2P10155 538 aaKnown RBP eCLIP12.38□□□□□ -0.43
SYNE1-204ENST00000367248 ARID5BQ14865 1188 aa12.38□□□□□ -0.43
SYNE1-204ENST00000367248 REEP2Q9BRK0 252 aa12.38□□□□□ -0.43
SYNE1-204ENST00000367248 M0QYV0 167 aa12.38□□□□□ -0.43
SYNE1-204ENST00000367248 ZBED1O96006 694 aa12.38□□□□□ -0.43
SYNE1-204ENST00000367248 SOX5P35711 763 aa12.38□□□□□ -0.43
SYNE1-204ENST00000367248 RFC5P40937 340 aa12.38□□□□□ -0.43
SYNE1-204ENST00000367248 PRKCEQ02156 737 aa12.38□□□□□ -0.43
SYNE1-204ENST00000367248 CFAP57Q96MR6 1250 aa12.38□□□□□ -0.43
SYNE1-204ENST00000367248 CTDNEP1O95476 244 aa12.38□□□□□ -0.43
SYNE1-204ENST00000367248 NUMBP49757 651 aa12.38□□□□□ -0.43
SYNE1-204ENST00000367248 GPC5P78333 572 aa12.38□□□□□ -0.43
SYNE1-204ENST00000367248 KCTD17Q8N5Z5 321 aa12.38□□□□□ -0.43
SYNE1-204ENST00000367248 PPFIBP2Q8ND30 876 aa12.38□□□□□ -0.43
SYNE1-204ENST00000367248 CCHCR1Q8TD31 782 aa12.38□□□□□ -0.43
SYNE1-204ENST00000367248 SLC4A9Q96Q91 983 aa12.38□□□□□ -0.43
SYNE1-204ENST00000367248 C7orf25Q9BPX7 421 aa12.38□□□□□ -0.43
SYNE1-204ENST00000367248 RNF208Q9H0X6 261 aa12.38□□□□□ -0.43
SYNE1-204ENST00000367248 UBE4BO95155 1302 aa12.38□□□□□ -0.43
SYNE1-204ENST00000367248 A0A1W2PQC6 194 aa12.38□□□□□ -0.43
SYNE1-204ENST00000367248 TTC26A0AVF1 554 aa12.38□□□□□ -0.43
SYNE1-204ENST00000367248 EPHB4P54760 987 aa12.38□□□□□ -0.43
SYNE1-204ENST00000367248 ANKRD40Q6AI12 368 aa12.38□□□□□ -0.43
SYNE1-204ENST00000367248 CCDC62Q6P9F0 684 aa12.38□□□□□ -0.43
SYNE1-204ENST00000367248 FRMD5Q7Z6J6 570 aa12.38□□□□□ -0.43
SYNE1-204ENST00000367248 ADGRA1Q86SQ6 560 aa12.38□□□□□ -0.43
SYNE1-204ENST00000367248 DAGLBQ8NCG7 672 aa12.38□□□□□ -0.43
SYNE1-204ENST00000367248 RNF217Q8TC41 542 aa12.38□□□□□ -0.43
SYNE1-204ENST00000367248 MAD2L2Q9UI95 211 aa12.38□□□□□ -0.43
SYNE1-204ENST00000367248 STAP1Q9ULZ2 295 aa12.38□□□□□ -0.43
SYNE1-204ENST00000367248 INHBAP08476 426 aa12.38□□□□□ -0.43
SYNE1-204ENST00000367248 RPA1P27694 616 aa12.38□□□□□ -0.43
SYNE1-204ENST00000367248 BACE1P56817 501 aa12.38□□□□□ -0.43
SYNE1-204ENST00000367248 PPP4R4Q6NUP7 873 aa12.38□□□□□ -0.43
SYNE1-204ENST00000367248 EXT2Q93063 718 aa12.38□□□□□ -0.43
SYNE1-204ENST00000367248 CCDC160A6NGH7 325 aa12.37□□□□□ -0.43
SYNE1-204ENST00000367248 RHOBTB3O94955 611 aa12.37□□□□□ -0.43
SYNE1-204ENST00000367248 LCP1P13796 627 aa12.37□□□□□ -0.43
SYNE1-204ENST00000367248 PLA2G4FQ68DD2 849 aa12.37□□□□□ -0.43
SYNE1-204ENST00000367248 CYP4F22Q6NT55 531 aa12.37□□□□□ -0.43
SYNE1-204ENST00000367248 PLEKHH3Q7Z736 793 aa12.37□□□□□ -0.43
SYNE1-204ENST00000367248 ACAP3Q96P50 834 aa12.37□□□□□ -0.43
SYNE1-204ENST00000367248 HPCAL4Q9UM19 191 aa12.37□□□□□ -0.43
SYNE1-204ENST00000367248 TMX2Q9Y320 296 aa12.37□□□□□ -0.43
SYNE1-204ENST00000367248 TMEM131LA2VDJ0 1609 aa12.37□□□□□ -0.43
SYNE1-204ENST00000367248 NPHP3-ACAD11A0A0J9YXS1 232 aa12.37□□□□□ -0.43
SYNE1-204ENST00000367248 GOLGA8KD6RF30 607 aa12.37□□□□□ -0.43
SYNE1-204ENST00000367248 ZNF131P52739 623 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms