RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 RBM10P98175 930 aaKnown RBP16.52■□□□□ 0.24
CTSD-202ENST00000367196 PPFIBP1Q86W92 1011 aa16.52■□□□□ 0.24
CTSD-202ENST00000367196 HACE1Q8IYU2 909 aa16.52■□□□□ 0.24
CTSD-202ENST00000367196 ZNF579Q8NAF0 562 aaKnown RBP16.52■□□□□ 0.24
CTSD-202ENST00000367196 TMEM175Q9BSA9 504 aa16.52■□□□□ 0.24
CTSD-202ENST00000367196 GBP3Q9H0R5 595 aa16.52■□□□□ 0.24
CTSD-202ENST00000367196 NRDE2Q9H7Z3 1164 aa16.52■□□□□ 0.24
CTSD-202ENST00000367196 TTC12Q9H892 705 aaPredicted RBP16.52■□□□□ 0.24
CTSD-202ENST00000367196 BMP2KQ9NSY1 1161 aaPredicted RBP16.52■□□□□ 0.24
CTSD-202ENST00000367196 ANKEF1Q9NU02 776 aa16.52■□□□□ 0.24
CTSD-202ENST00000367196 BTBD18B2RXH4 712 aa16.51■□□□□ 0.23
CTSD-202ENST00000367196 SLITRK3O94933 977 aa16.51■□□□□ 0.23
CTSD-202ENST00000367196 LARGE1O95461 756 aa16.51■□□□□ 0.23
CTSD-202ENST00000367196 CXCL14O95715 111 aa16.51■□□□□ 0.23
CTSD-202ENST00000367196 GALTP07902 379 aa16.51■□□□□ 0.23
CTSD-202ENST00000367196 CTSAP10619 480 aa16.51■□□□□ 0.23
CTSD-202ENST00000367196 POU5F1BQ06416 359 aa16.51■□□□□ 0.23
CTSD-202ENST00000367196 LONRF3Q496Y0 759 aa16.51■□□□□ 0.23
CTSD-202ENST00000367196 NOTUMQ6P988 496 aa16.51■□□□□ 0.23
CTSD-202ENST00000367196 SYCE2Q6PIF2 218 aa16.51■□□□□ 0.23
CTSD-202ENST00000367196 MRPL10Q7Z7H8 261 aaKnown RBP16.51■□□□□ 0.23
CTSD-202ENST00000367196 RIPOR3Q96MK2 946 aa16.51■□□□□ 0.23
CTSD-202ENST00000367196 HSD17B14Q9BPX1 270 aa16.51■□□□□ 0.23
CTSD-202ENST00000367196 S1PR5Q9H228 398 aa16.51■□□□□ 0.23
CTSD-202ENST00000367196 FAM205CA6NFA0 338 aa16.5■□□□□ 0.23
CTSD-202ENST00000367196 CLASP2O75122 1294 aaKnown RBP16.5■□□□□ 0.23
CTSD-202ENST00000367196 NCLP19338 710 aaKnown RBP16.5■□□□□ 0.23
CTSD-202ENST00000367196 TXKP42681 527 aa16.5■□□□□ 0.23
CTSD-202ENST00000367196 MTHFRP42898 656 aa16.5■□□□□ 0.23
CTSD-202ENST00000367196 PTENP60484 403 aa16.5■□□□□ 0.23
CTSD-202ENST00000367196 ORC2Q13416 577 aaPredicted RBP16.5■□□□□ 0.23
CTSD-202ENST00000367196 AGMOQ6ZNB7 445 aa16.5■□□□□ 0.23
CTSD-202ENST00000367196 HFE2Q6ZVN8 426 aa16.5■□□□□ 0.23
CTSD-202ENST00000367196 BMP8AQ7Z5Y6 402 aa16.5■□□□□ 0.23
CTSD-202ENST00000367196 EMILIN2Q9BXX0 1053 aa16.5■□□□□ 0.23
CTSD-202ENST00000367196 NFKBIZQ9BYH8 718 aa16.5■□□□□ 0.23
CTSD-202ENST00000367196 TRIM6Q9C030 488 aaPredicted RBP16.5■□□□□ 0.23
CTSD-202ENST00000367196 ADAM7Q9H2U9 754 aa16.5■□□□□ 0.23
CTSD-202ENST00000367196 MINDY3Q9H8M7 445 aa16.5■□□□□ 0.23
CTSD-202ENST00000367196 INO80B-WBP1J3KQ70 363 aa16.49■□□□□ 0.23
CTSD-202ENST00000367196 TECTAO75443 2155 aa16.49■□□□□ 0.23
CTSD-202ENST00000367196 NR1I2O75469 434 aa16.49■□□□□ 0.23
CTSD-202ENST00000367196 ALDH2P05091 517 aa16.49■□□□□ 0.23
CTSD-202ENST00000367196 XRCC6P12956 609 aaKnown RBP eCLIP16.49■□□□□ 0.23
CTSD-202ENST00000367196 ITGA4P13612 1032 aa16.49■□□□□ 0.23
CTSD-202ENST00000367196 HOXA11P31270 313 aaPredicted RBP16.49■□□□□ 0.23
CTSD-202ENST00000367196 ZXDAP98168 799 aa16.49■□□□□ 0.23
CTSD-202ENST00000367196 TRIM67Q6ZTA4 783 aa16.49■□□□□ 0.23
CTSD-202ENST00000367196 IFNLR1Q8IU57 520 aaPredicted RBP16.49■□□□□ 0.23
CTSD-202ENST00000367196 SUGP1Q8IWZ8 645 aaKnown RBP16.49■□□□□ 0.23
CTSD-202ENST00000367196 ERMNQ8TAM6 284 aa16.49■□□□□ 0.23
CTSD-202ENST00000367196 DNAJB4Q9UDY4 337 aa16.49■□□□□ 0.23
CTSD-202ENST00000367196 SSX2IPQ9Y2D8 614 aa16.49■□□□□ 0.23
CTSD-202ENST00000367196 FAN1Q9Y2M0 1017 aa16.49■□□□□ 0.23
CTSD-202ENST00000367196 ZNF318Q5VUA4 2279 aa16.48■□□□□ 0.23
CTSD-202ENST00000367196 SPDYE4A6NLX3 237 aa16.48■□□□□ 0.23
CTSD-202ENST00000367196 MEIS3P2A8K0S8 358 aa16.48■□□□□ 0.23
CTSD-202ENST00000367196 TSPAN1O60635 241 aa16.48■□□□□ 0.23
CTSD-202ENST00000367196 JAK2O60674 1132 aa16.48■□□□□ 0.23
CTSD-202ENST00000367196 HOXD11P31277 338 aaPredicted RBP16.48■□□□□ 0.23
CTSD-202ENST00000367196 SLC11A1P49279 550 aa16.48■□□□□ 0.23
CTSD-202ENST00000367196 RARRES1P49788 294 aa16.48■□□□□ 0.23
CTSD-202ENST00000367196 SIGLEC14Q08ET2 396 aa16.48■□□□□ 0.23
CTSD-202ENST00000367196 UBXN11Q5T124 520 aa16.48■□□□□ 0.23
CTSD-202ENST00000367196 ELMSAN1Q6PJG2 1045 aa16.48■□□□□ 0.23
CTSD-202ENST00000367196 ZBTB33Q86T24 672 aa16.48■□□□□ 0.23
CTSD-202ENST00000367196 TMEM173Q86WV6 379 aaPredicted RBP16.48■□□□□ 0.23
CTSD-202ENST00000367196 MTMR9Q96QG7 549 aa16.48■□□□□ 0.23
CTSD-202ENST00000367196 PRRX2Q99811 253 aa16.48■□□□□ 0.23
CTSD-202ENST00000367196 LLPHQ9BRT6 129 aaKnown RBP16.48■□□□□ 0.23
CTSD-202ENST00000367196 APOL5Q9BWW9 433 aa16.48■□□□□ 0.23
CTSD-202ENST00000367196 XPNPEP1Q9NQW7 623 aa16.48■□□□□ 0.23
CTSD-202ENST00000367196 TSHZ2Q9NRE2 1034 aa16.48■□□□□ 0.23
CTSD-202ENST00000367196 LIMCH1Q9UPQ0 1083 aa16.48■□□□□ 0.23
CTSD-202ENST00000367196 IPPQ9Y573 584 aa16.48■□□□□ 0.23
CTSD-202ENST00000367196 PIEZO1Q92508 2521 aa16.47■□□□□ 0.23
CTSD-202ENST00000367196 TMEM221A6NGB7 291 aa16.47■□□□□ 0.23
CTSD-202ENST00000367196 M0R296 226 aa16.47■□□□□ 0.23
CTSD-202ENST00000367196 ZBTB39O15060 712 aa16.47■□□□□ 0.23
CTSD-202ENST00000367196 DTNBO60941 627 aa16.47■□□□□ 0.23
CTSD-202ENST00000367196 ARL2P36404 184 aa16.47■□□□□ 0.23
CTSD-202ENST00000367196 FOSBP53539 338 aa16.47■□□□□ 0.23
CTSD-202ENST00000367196 GNL2Q13823 731 aaKnown RBP16.47■□□□□ 0.23
CTSD-202ENST00000367196 CAPSQ13938 189 aa16.47■□□□□ 0.23
CTSD-202ENST00000367196 PTPN14Q15678 1187 aa16.47■□□□□ 0.23
CTSD-202ENST00000367196 PTPN21Q16825 1174 aa16.47■□□□□ 0.23
CTSD-202ENST00000367196 CABP7Q86V35 215 aa16.47■□□□□ 0.23
CTSD-202ENST00000367196 MCPH1Q8NEM0 835 aa16.47■□□□□ 0.23
CTSD-202ENST00000367196 PBXIP1Q96AQ6 731 aa16.47■□□□□ 0.23
CTSD-202ENST00000367196 C8orf76Q96K31 380 aa16.47■□□□□ 0.23
CTSD-202ENST00000367196 CSRNP2Q9H175 543 aa16.47■□□□□ 0.23
CTSD-202ENST00000367196 SFXN1Q9H9B4 322 aa16.47■□□□□ 0.23
CTSD-202ENST00000367196 TUFT1Q9NNX1 390 aa16.47■□□□□ 0.23
CTSD-202ENST00000367196 MRPL17Q9NRX2 175 aaKnown RBP16.47■□□□□ 0.23
CTSD-202ENST00000367196 DAXXQ9UER7 740 aaPredicted RBP16.47■□□□□ 0.23
CTSD-202ENST00000367196 DPP7Q9UHL4 492 aa16.47■□□□□ 0.23
CTSD-202ENST00000367196 ZMYM2Q9UBW7 1377 aa16.47■□□□□ 0.23
CTSD-202ENST00000367196 POTEMA6NI47 508 aa16.46■□□□□ 0.23
CTSD-202ENST00000367196 INPPL1O15357 1258 aa16.46■□□□□ 0.23
CTSD-202ENST00000367196 USO1O60763 962 aaKnown RBP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms