RNA–Protein interactions for RNA: ENST00000361371.9

LTN1-201, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LTN1, Length 7,685 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-201ENST00000361371 KIAA0753Q2KHM9 967 aa3.13□□□□□ -1.91
LTN1-201ENST00000361371 KLHDC7AQ5VTJ3 777 aa3.13□□□□□ -1.91
LTN1-201ENST00000361371 NYAP1Q6ZVC0 841 aa3.13□□□□□ -1.91
LTN1-201ENST00000361371 TCHPQ9BT92 498 aa3.13□□□□□ -1.91
LTN1-201ENST00000361371 ABHD16BQ9H3Z7 469 aa3.13□□□□□ -1.91
LTN1-201ENST00000361371 SMARCAL1Q9NZC9 954 aa3.13□□□□□ -1.91
LTN1-201ENST00000361371 HDAC6Q9UBN7 1215 aa3.13□□□□□ -1.91
LTN1-201ENST00000361371 LUC7L2Q9Y383 392 aaKnown RBP3.13□□□□□ -1.91
LTN1-201ENST00000361371 DLEC1Q9Y238 1755 aa3.13□□□□□ -1.91
LTN1-201ENST00000361371 DNAH12Q6ZR08 3092 aa3.13□□□□□ -1.91
LTN1-201ENST00000361371 RBM47A0AV96 593 aaKnown RBP3.13□□□□□ -1.91
LTN1-201ENST00000361371 FOXN3O00409 490 aaPredicted RBP3.13□□□□□ -1.91
LTN1-201ENST00000361371 PPEF2O14830 753 aa3.13□□□□□ -1.91
LTN1-201ENST00000361371 GH1P01241 217 aa3.13□□□□□ -1.91
LTN1-201ENST00000361371 PRKAR2AP13861 404 aaKnown RBP3.13□□□□□ -1.91
LTN1-201ENST00000361371 TRIM21P19474 475 aaKnown RBP3.13□□□□□ -1.91
LTN1-201ENST00000361371 DNM2P50570 870 aa3.13□□□□□ -1.91
LTN1-201ENST00000361371 TPM4P67936 248 aa3.13□□□□□ -1.91
LTN1-201ENST00000361371 HS1BP3Q53T59 392 aa3.13□□□□□ -1.91
LTN1-201ENST00000361371 TAF3Q5VWG9 929 aa3.13□□□□□ -1.91
LTN1-201ENST00000361371 TLK2Q86UE8 772 aa3.13□□□□□ -1.91
LTN1-201ENST00000361371 AFAP1L1Q8TED9 768 aa3.13□□□□□ -1.91
LTN1-201ENST00000361371 SLC20A1Q8WUM9 679 aa3.13□□□□□ -1.91
LTN1-201ENST00000361371 CPB2Q96IY4 423 aa3.13□□□□□ -1.91
LTN1-201ENST00000361371 CDHR1Q96JP9 859 aa3.13□□□□□ -1.91
LTN1-201ENST00000361371 KREMEN1Q96MU8 473 aa3.13□□□□□ -1.91
LTN1-201ENST00000361371 OSMRQ99650 979 aa3.13□□□□□ -1.91
LTN1-201ENST00000361371 LPIN3Q9BQK8 851 aa3.13□□□□□ -1.91
LTN1-201ENST00000361371 ZSWIM1Q9BR11 485 aa3.13□□□□□ -1.91
LTN1-201ENST00000361371 NRBP2Q9NSY0 501 aa3.13□□□□□ -1.91
LTN1-201ENST00000361371 SUCLA2Q9P2R7 463 aaPredicted RBP3.13□□□□□ -1.91
LTN1-201ENST00000361371 MAGEC2Q9UBF1 373 aaPredicted RBP3.13□□□□□ -1.91
LTN1-201ENST00000361371 DNAI1Q9UI46 699 aa3.13□□□□□ -1.91
LTN1-201ENST00000361371 HYOU1Q9Y4L1 999 aa3.13□□□□□ -1.91
LTN1-201ENST00000361371 BICDL2A1A5D9 508 aa3.12□□□□□ -1.91
LTN1-201ENST00000361371 FAM189A1O60320 539 aa3.12□□□□□ -1.91
LTN1-201ENST00000361371 TNNT1P13805 278 aa3.12□□□□□ -1.91
LTN1-201ENST00000361371 UCHL3P15374 230 aa3.12□□□□□ -1.91
LTN1-201ENST00000361371 MAPK4P31152 587 aa3.12□□□□□ -1.91
LTN1-201ENST00000361371 GFPT1Q06210 699 aaPredicted RBP3.12□□□□□ -1.91
LTN1-201ENST00000361371 PDXDC1Q6P996 788 aa3.12□□□□□ -1.91
LTN1-201ENST00000361371 ZNF571Q7Z3V5 609 aaPredicted RBP3.12□□□□□ -1.91
LTN1-201ENST00000361371 PPFIBP1Q86W92 1011 aa3.12□□□□□ -1.91
LTN1-201ENST00000361371 LINC01465Q8N7H1 131 aa3.12□□□□□ -1.91
LTN1-201ENST00000361371 OR6J1Q8NGC5 347 aa3.12□□□□□ -1.91
LTN1-201ENST00000361371 OR8K1Q8NGG5 319 aa3.12□□□□□ -1.91
LTN1-201ENST00000361371 SH3TC2Q8TF17 1288 aa3.12□□□□□ -1.91
LTN1-201ENST00000361371 FAM212AQ96EL1 285 aa3.12□□□□□ -1.91
LTN1-201ENST00000361371 CEP63Q96MT8 703 aa3.12□□□□□ -1.91
LTN1-201ENST00000361371 DNAJC7Q99615 494 aa3.12□□□□□ -1.91
LTN1-201ENST00000361371 INTS2Q9H0H0 1204 aaKnown RBP3.12□□□□□ -1.91
LTN1-201ENST00000361371 LRRIQ3A6PVS8 624 aaPredicted RBP3.12□□□□□ -1.91
LTN1-201ENST00000361371 CBFA2T2O43439 604 aa3.12□□□□□ -1.91
LTN1-201ENST00000361371 ADCY3O60266 1144 aa3.12□□□□□ -1.91
LTN1-201ENST00000361371 VNN1O95497 513 aa3.12□□□□□ -1.91
LTN1-201ENST00000361371 TGFB3P10600 412 aa3.12□□□□□ -1.91
LTN1-201ENST00000361371 GAP43P17677 238 aa3.12□□□□□ -1.91
LTN1-201ENST00000361371 SNRNP35Q16560 246 aaKnown RBP3.12□□□□□ -1.91
LTN1-201ENST00000361371 FILIP1LQ4L180 1135 aa3.12□□□□□ -1.91
LTN1-201ENST00000361371 HS2ST1Q7LGA3 356 aa3.12□□□□□ -1.91
LTN1-201ENST00000361371 GLYCTKQ8IVS8 523 aa3.12□□□□□ -1.91
LTN1-201ENST00000361371 XXYLT1Q8NBI6 393 aa3.12□□□□□ -1.91
LTN1-201ENST00000361371 DEPTORQ8TB45 409 aa3.12□□□□□ -1.91
LTN1-201ENST00000361371 LNX1Q8TBB1 728 aaPredicted RBP3.12□□□□□ -1.91
LTN1-201ENST00000361371 DNAJB3Q8WWF6 145 aa3.12□□□□□ -1.91
LTN1-201ENST00000361371 SPIRE2Q8WWL2 714 aa3.12□□□□□ -1.91
LTN1-201ENST00000361371 PCDHB18PQ96TA0 734 aa3.12□□□□□ -1.91
LTN1-201ENST00000361371 LRRC27Q9C0I9 530 aa3.12□□□□□ -1.91
LTN1-201ENST00000361371 ZFYVE28Q9HCC9 887 aa3.12□□□□□ -1.91
LTN1-201ENST00000361371 CAPN11Q9UMQ6 739 aa3.12□□□□□ -1.91
LTN1-201ENST00000361371 K7ERI5 159 aa3.12□□□□□ -1.91
LTN1-201ENST00000361371 GFPT2O94808 682 aa3.12□□□□□ -1.91
LTN1-201ENST00000361371 FECHP22830 423 aa3.12□□□□□ -1.91
LTN1-201ENST00000361371 BFSP1Q12934 665 aa3.12□□□□□ -1.91
LTN1-201ENST00000361371 MTFR1Q15390 333 aa3.12□□□□□ -1.91
LTN1-201ENST00000361371 GNASQ5JWF2 1037 aa3.12□□□□□ -1.91
LTN1-201ENST00000361371 IRF2BP2Q7Z5L9 587 aa3.12□□□□□ -1.91
LTN1-201ENST00000361371 SMC1BQ8NDV3 1235 aa3.12□□□□□ -1.91
LTN1-201ENST00000361371 BBXQ8WY36 941 aaPredicted RBP3.12□□□□□ -1.91
LTN1-201ENST00000361371 ACCSQ96QU6 501 aa3.12□□□□□ -1.91
LTN1-201ENST00000361371 CDT1Q9H211 546 aa3.12□□□□□ -1.91
LTN1-201ENST00000361371 HAUS4Q9H6D7 363 aa3.12□□□□□ -1.91
LTN1-201ENST00000361371 PLCB1Q9NQ66 1216 aa3.12□□□□□ -1.91
LTN1-201ENST00000361371 DNAJC12Q9UKB3 198 aa3.12□□□□□ -1.91
LTN1-201ENST00000361371 PNMA2Q9UL42 364 aa3.12□□□□□ -1.91
LTN1-201ENST00000361371 PLAGL2Q9UPG8 496 aa3.12□□□□□ -1.91
LTN1-201ENST00000361371 A0A0B4J269 797 aa3.12□□□□□ -1.91
LTN1-201ENST00000361371 PPFIA4O75335 1185 aa3.12□□□□□ -1.91
LTN1-201ENST00000361371 MMP3P08254 477 aa3.12□□□□□ -1.91
LTN1-201ENST00000361371 MYL3P08590 195 aa3.12□□□□□ -1.91
LTN1-201ENST00000361371 FMO5P49326 533 aa3.12□□□□□ -1.91
LTN1-201ENST00000361371 DNA2P51530 1060 aa3.12□□□□□ -1.91
LTN1-201ENST00000361371 MARSP56192 900 aaKnown RBP3.12□□□□□ -1.91
LTN1-201ENST00000361371 ZBED6P86452 979 aa3.12□□□□□ -1.91
LTN1-201ENST00000361371 LLGL1Q15334 1064 aa3.12□□□□□ -1.91
LTN1-201ENST00000361371 ASTE1Q2TB18 679 aaPredicted RBP3.12□□□□□ -1.91
LTN1-201ENST00000361371 ZNF394Q53GI3 561 aa3.12□□□□□ -1.91
LTN1-201ENST00000361371 EFCAB13Q8IY85 973 aa3.12□□□□□ -1.91
LTN1-201ENST00000361371 ABRAQ8N0Z2 381 aa3.12□□□□□ -1.91
LTN1-201ENST00000361371 RDM1Q8NG50 284 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms